Pre_GI: BLASTP Hits

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Query: NC_007964:2152000:2168170 Nitrobacter hamburgensis X14, complete genome

Start: 2168170, End: 2168865, Length: 696

Host Lineage: Nitrobacter hamburgensis; Nitrobacter; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Nitrobacter hamburgensis X14 was isolated from soil. Nitrite-oxidizing soil bacterium. Members of this genus are found in marine, freshwater, and terrestrial habitats, often in association with ammonia-oxidizing bacteria. These organisms oxidize nitrite, generated by the oxidation of ammonia, to nitrate and play an important role in the global nitrogen cycle. The enzyme involved in nitrite oxidation, nitrite oxidoreductase, can also reduce nitrate to nitrite in the absence of oxygen, allowing Nitrobacter sp. to grow anaerobically. Nitrobacter hamburgensis is commonly isolated from freshwater, soil, and sewage sludge. This organism has been used in biofilms to remove nitrogen from wastewater.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004463:2262467:228840322884032289197795Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulator FixK3e-62238
NC_011894:5468500:546963554696355470327693Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, Crp/Fnr family6e-61233
NC_004463:8401060:844141984414198442180762Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulator FixK3e-56218
NC_010511:6711836:671476367147636715446684Methylobacterium sp. 4-46 chromosome, complete genomeCrp/FNR family transcriptional regulator2e-55215
NC_007643:3799425:383194738319473832735789Rhodospirillum rubrum ATCC 11170, complete genomeTranscriptional Regulator, Crp/Fnr family4e-32137
NC_011894:5056901:510326151032615103977717Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, Crp/Fnr family1e-27123
NC_011894:3988500:400338440033844004100717Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, Crp/Fnr family1e-27123
NC_006677:1052031:107268610726861073408723Gluconobacter oxydans 621H, complete genomeTranscriptional regulator AadR (cyclic AMP receptor protein)2e-24112
NC_011080:1750000:175072917507291751481753Salmonella enterica subsp. enterica serovar Newport str. SL254,fumarate and nitrate reduction regulatory protein4e-24111
NC_008258:1873805:187380518738051874557753Shigella flexneri 5 str. 8401, complete genomeFumarate and nitrate reduction Regulatory protein4e-24111
NC_011149:1429523:144800414480041448756753Salmonella enterica subsp. enterica serovar Agona str. SL483,fumarate and nitrate reduction regulatory protein4e-24111
NC_010688:2400471:242659224265922427353762Xanthomonas campestris pv. campestris, complete genomeTranscriptional regulator, Crp/Fnr family4e-24111
NC_015761:1630000:164667116466711647465795Salmonella bongori NCTC 12419, complete genomefumarate and nitrate reduction regulatory protein4e-24111
NC_016863:1711832:171250117125011713295795Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1fumarate/nitrate reduction transcriptional regulator4e-24111
NC_011147:1267005:128548912854891286283795Salmonella enterica subsp. enterica serovar Paratyphi A strfumarate/nitrate reduction transcriptional regulator4e-24111
NC_006511:1273162:129164612916461292440795Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCfumarate and nitrate reduction regulatory protein4e-24111
NC_011894:6259649:627470162747016275444744Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, Crp/Fnr family5e-24111
NC_003197:1753663:175437417543741755126753Salmonella typhimurium LT2, complete genometranscriptional regulator4e-24111
NC_011094:1726000:172755417275541728306753Salmonella enterica subsp. enterica serovar Schwarzengrund strfumarate/nitrate reduction transcriptional regulator4e-24111
NC_006905:1766000:176744717674471768292846Salmonella enterica subsp. enterica serovar Choleraesuis strtranscriptional regulation of aerobic, anaerobic respiration, osmotic balance (CRP family)3e-24111
NC_009792:1345500:136427313642731365103831Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-24111
NC_003198:1336894:135538713553871356181795Salmonella enterica subsp. enterica serovar Typhi str. CT18,fumarate and nitrate reduction regulatory protein4e-24111
NC_004631:1623511:162500116250011625795795Salmonella enterica subsp. enterica serovar Typhi Ty2, completefumarate and nitrate reduction regulatory protein4e-24111
NC_017046:1709578:171111017111101711862753Salmonella enterica subsp. enterica serovar Typhimurium str. 798fumarate and nitrate reduction regulatory protein4e-24111
NC_016860:1752000:175206517520651752817753Salmonella enterica subsp. enterica serovar Typhimurium strfumarate/nitrate reduction transcriptional regulator4e-24111
NC_016857:1709695:171122717112271711979753Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74Fumarate and nitrate reduction regulatory protein4e-24111
NC_016856:1763640:176435117643511765103753Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sfumarate/nitrate reduction transcriptional regulator4e-24111
NC_016810:1709695:171122717112271711979753Salmonella enterica subsp. enterica serovar Typhimurium strfumarate and nitrate reduction regulatory protein4e-24111
NC_007347:1215358:123856512385651239350786Ralstonia eutropha JMP134 chromosome 1, complete sequenceCyclic nucleotide-binding:Bacterial regulatory protein, Crp9e-24110
NC_012214:1974500:201414020141402014895756Erwinia pyrifoliae Ep1/96, complete genomeFumarate and nitrate reduction regulatory protein3e-23108
NC_013209:2759160:277893527789352779747813Acetobacter pasteurianus IFO 3283-01, complete genometranscriptional regulator cAMP-binding AadR/Crp/Fnr9e-23107
NC_009052:2512373:255438425543842555136753Shewanella baltica OS155, complete genomeputative transcriptional regulator, Crp/Fnr family1e-22106
NC_021150:1965264:197785119778511978585735Azotobacter vinelandii CA6, complete genomeFnr-like negative transcriptional regulator of CydAB1e-22106
NC_012560:1965251:197783819778381978572735Azotobacter vinelandii DJ, complete genomeFnr-like negative transcriptional regulator of CydAB1e-22106
NC_012913:772641:781906781906782679774Aggregatibacter aphrophilus NJ8700, complete genometranscriptional activator protein anr2e-22105
NC_008027:1847040:187215418721541872888735Pseudomonas entomophila L48, complete genometranscriptional regulator Anr2e-22105
NC_014541:2122788:214288821428882143640753Ferrimonas balearica DSM 9799 chromosome, complete genometranscriptional regulator, Crp/Fnr family3e-22105
NC_008702:1432952:146890714689071469707801Azoarcus sp. BH72, complete genomeprobable fumarate and nitrate reduction regulatory protein5e-22104
NC_013416:1246880:125844412584441259217774Aggregatibacter actinomycetemcomitans D11S-1, complete genometranscriptional activator protein anr1e-21103
NC_016513:1568401:158001815800181580791774Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completefumarate/nitrate reduction transcriptional regulator1e-21103
NC_009467:117812:123843123843124535693Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequenceCRP/FNR family transcriptional regulator1e-21103
NC_009092:2282437:230490623049062305655750Shewanella loihica PV-4, complete genometranscriptional regulator, Crp/Fnr family1e-21103
NC_009485:8138314:815373881537388154445708Bradyrhizobium sp. BTAi1 chromosome, complete genomenitrogen fixation regulation protein fixK9e-22103
NC_015731:3658956:367863236786323679384753Nitrosomonas sp. Is79A3 chromosome, complete genomeCrp/Fnr family transcriptional regulator2e-21102
NC_009379:435404:451156451156451926771Polynucleobacter sp. QLW-P1DMWA-1, complete genomeputative transcriptional regulator, Crp/Fnr family1e-20100
NC_017516:364404:384318384318385052735Neisseria meningitidis H44/76 chromosome, complete genomeCarD family transcriptional regulator2e-2099.4
NC_003112:364869:383368383368384102735Neisseria meningitidis MC58, complete genometranscriptional regulator, Crp/Fnr family2e-2099.4
NC_009075:15017:440874408744842756Burkholderia pseudomallei 668 chromosome II, complete sequencecAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases2e-2099
NC_003295:199354:211194211194211994801Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSCRIPTION REGULATOR PROTEIN5e-2097.8
NC_010676:304405:322022322022322678657Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, Crp/Fnr family1e-1996.7
NC_017515:372487:392257392257392991735Neisseria meningitidis M04-240196 chromosome, complete genomeCarD family transcriptional regulator1e-1996.7
NC_007973:1821753:183254218325421833276735Ralstonia metallidurans CH34 chromosome 1, complete sequencetranscriptional regulator, Crp/Fnr family1e-1996.3
NC_008782:1136732:114535311453531146096744Acidovorax sp. JS42, complete genomeputative transcriptional regulator, Crp/Fnr family2e-1995.9
NC_011992:1038985:104761010476101048338729Acidovorax ebreus TPSY, complete genometranscriptional regulator, Crp/Fnr family2e-1995.9
NC_014118:1528851:153062115306211531277657Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, Crp/Fnr family3e-1995.5
NC_007298:1129889:114843611484361149179744Dechloromonas aromatica RCB, complete genomeCyclic nucleotide-binding:Bacterial regulatory protein, Crp3e-1995.1
NC_014910:3458475:346770834677083468451744Alicycliphilus denitrificans BC chromosome, complete genomecyclic nucleotide-binding protein6e-1994.4
NC_015422:1163752:117589611758961176639744Alicycliphilus denitrificans K601 chromosome, complete genomeCrp/Fnr family transcriptional regulator6e-1994.4
NC_009485:8138314:815645981564598157229771Bradyrhizobium sp. BTAi1 chromosome, complete genomenitrogen fixation regulation protein fixK5e-1994.4
NC_009254:745706:752178752178753053876Burkholderia vietnamiensis G4 chromosome 3, complete sequenceCRP/FNR family transcriptional regulator8e-1994
NC_012988:1280610:130177013017701302492723Methylobacterium extorquens DM4, complete genomeCrp/Fnr family transcriptional regulator9e-1993.6
NC_007951:570500:602624602624603352729Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, Crp/Fnr family2e-1892.8
NC_014532:722151:734320734320735051732Halomonas elongata DSM 2581, complete genometranscriptional regulator Anr3e-1788.6
NC_007930:50801:665926659267296705Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,Transcriptional regulator, crp family3e-1788.6
NC_010172:3894652:392950539295053930158654Methylobacterium extorquens PA1, complete genomeregulatory protein Crp5e-1684.7
NC_012988:32996:485294852949293765Methylobacterium extorquens DM4, complete genomeregulatory protein, Crp2e-1582.8
NC_007952:444616:451579451579452328750Burkholderia xenovorans LB400 chromosome 2, complete sequenceTranscriptional regulator, Crp/Fnr family8e-1580.5
NC_016052:2335648:234916823491682349875708Tetragenococcus halophilus NBRC 12172, complete genomeFNR-like protein FLP1e-1480.1
NC_007494:714525:727571727571728302732Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequencetranscriptional regulator, Crp-Fnr family3e-1478.6
NC_010725:4035397:407820140782014078938738Methylobacterium populi BJ001, complete genometranscriptional regulator, Crp/Fnr family4e-1478.2
NC_010172:5447189:544936054493605450313954Methylobacterium extorquens PA1, complete genomecyclic nucleotide-binding4e-1478.2
NC_011757:5742290:574861057486105749509900Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, Crp/Fnr family5e-1478.2
NC_009485:8138314:815486681548668155327462Bradyrhizobium sp. BTAi1 chromosome, complete genomenitrogen fixation regulation protein fixK7e-1477.4
NC_011757:3540992:357466535746653575411747Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, Crp/Fnr family1e-1377
NC_011894:1499229:150931315093131510116804Methylobacterium nodulans ORS 2060, complete genomeputative transcriptional regulator, Crp/Fnr family3e-1375.5
NC_014964:2301835:231894623189462319623678Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completecyclic nucleotide-binding protein2e-1375.5
NC_010321:2319820:233693123369312337608678Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeCrp/FNR family transcriptional regulator2e-1375.5
NC_010511:5467009:547824954782495478914666Methylobacterium sp. 4-46 chromosome, complete genomeCRP/FNR family transcriptional regulator8e-1373.9
NC_014209:2257316:228113822811382281815678Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,transcriptional regulator, Crp/Fnr family1e-1273.2
NC_011894:3268850:327233932723393273262924Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, Crp/Fnr family3e-1272.4
NC_009483:2640403:268419626841962684897702Geobacter uraniireducens Rf4 chromosome, complete genomeCRP/FNR family transcriptional regulator6e-1271.2
NC_011894:7563668:756921275692127569952741Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, Crp/Fnr family7e-1270.9
NC_015681:102000:116429116429117118690Thermodesulfatator indicus DSM 15286 chromosome, complete genomeCrp/Fnr family transcriptional regulator3e-1168.9
NC_010172:798923:8426678426678437971131Methylobacterium extorquens PA1, complete genomecyclic nucleotide-binding3e-1168.9
NC_012982:1597697:160949416094941610198705Hirschia baltica ATCC 49814, complete genometranscriptional regulator, Crp/Fnr family2e-1168.9
NC_010725:4035397:410845141084514109200750Methylobacterium populi BJ001, complete genometranscriptional regulator, Crp/Fnr family4e-1168.6
NC_012988:769981:8174538174538185831131Methylobacterium extorquens DM4, complete genomeCrp/Fnr family transcriptional regulator5e-1168.2
NC_019902:1061432:106493510649351065654720Thioalkalivibrio nitratireducens DSM 14787, complete genomecAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase7e-1167.4
NC_009049:627000:627031627031627771741Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencecyclic nucleotide-binding protein8e-1167.4
NC_007493:546000:549413549413550153741Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceTranscriptional regulator, CRP/FNR family9e-1167.4
NC_010610:1649500:166446916644691665119651Lactobacillus fermentum IFO 3956, complete genometranscriptional regulator1e-1067
NC_011894:7563668:758337875833787584118741Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, Crp/Fnr family9e-1167
NC_010172:57500:834578345784224768Methylobacterium extorquens PA1, complete genomecyclic nucleotide-binding1e-1066.6
NC_011757:39881:5967159671608251155Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, Crp/Fnr family2e-1066.2
NC_014934:2223822:222875722287572229515759Cellulophaga algicola DSM 14237 chromosome, complete genometranscriptional regulator, crp/fnr family3e-1065.5
NC_008609:2643000:264311826431182643834717Pelobacter propionicus DSM 2379, complete genometranscriptional regulator, Crp/Fnr family7e-1064.3
NC_012918:2850755:285603528560352856751717Geobacter sp. M21 chromosome, complete genomeCrp/Fnr family transcriptional regulator1e-0963.5
NC_011757:3540992:3571656357165635728101155Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, Crp/Fnr family1e-0963.2
NC_008711:3701635:370163537016353702312678Arthrobacter aurescens TC1, complete genomeputative cyclic nucleotide-binding domain2e-0962.8
NC_016593:868500:884318884318885004687Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeanaerobic regulatory protein2e-0962.8
NC_020409:437781:497477497477498151675Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeTranscriptional regulator, Crp/Fnr family3e-0962
NC_008699:1673181:171828917182891718996708Nocardioides sp. JS614, complete genomecyclic nucleotide-binding4e-0961.6
NC_012988:769981:806343806343807155813Methylobacterium extorquens DM4, complete genomeCrp/Fnr family transcriptional regulator5e-0961.2
NC_010337:1:225122512943693Heliobacterium modesticaldum Ice1, complete genometranscriptional regulator, crp/fnr family6e-0961.2
NC_015957:10403997:104039971040399710404671675Streptomyces violaceusniger Tu 4113 chromosome, complete genomeCrp/Fnr family transcriptional regulator8e-0960.8
NC_014960:1697818:170794217079421708643702Anaerolinea thermophila UNI-1, complete genomeCrp family transcriptional regulator9e-0960.5
NC_010172:798923:832740832740833504765Methylobacterium extorquens PA1, complete genomecyclic nucleotide-binding9e-0960.5
NC_014323:2680085:271067027106702711488819Herbaspirillum seropedicae SmR1 chromosome, complete genomeCrp/Fnr family transcription regulator1e-0860.1
NC_015436:474710:498940498940499809870Spirochaeta coccoides DSM 17374 chromosome, complete genometranscriptional regulator, Crp/Fnr family2e-0859.7
NC_020411:558153:567206567206567937732Hydrogenobaculum sp. HO, complete genometranscriptional regulator, Crp/Fnr family2e-0859.7
NC_015587:558180:567233567233567964732Hydrogenobaculum sp. SHO chromosome, complete genometranscriptional regulator, Crp/Fnr family2e-0859.7
NC_015557:558127:567180567180567911732Hydrogenobaculum sp. 3684 chromosome, complete genometranscriptional regulator, Crp/Fnr family2e-0859.7
NC_014973:1992694:202097520209752021700726Geobacter sp. M18 chromosome, complete genomeCrp/Fnr family transcriptional regulator2e-0859.3
NC_012848:320883:335279335279335950672Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501,transcriptional regulator, Crp/Fnr family2e-0859.3
NC_010511:7024412:703564070356407036380741Methylobacterium sp. 4-46 chromosome, complete genomeCrp/FNR family transcriptional regulator2e-0859.3
NC_014973:1071500:107709410770941077963870Geobacter sp. M18 chromosome, complete genomeCrp/Fnr family transcriptional regulator3e-0858.9
NC_013943:1019213:104091310409131041569657Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeCrp/Fnr family transcriptional regulator5e-0858.2
NC_015589:814530:835693835693836349657Desulfotomaculum ruminis DSM 2154 chromosome, complete genomecyclic nucleotide-binding protein7e-0857.8
NC_012440:1405879:141651514165151417198684Persephonella marina EX-H1, complete genometranscriptional regulator7e-0857.8
NC_011126:555483:578310578310579041732Hydrogenobaculum sp. Y04AAS1, complete genometranscriptional regulator, Crp/Fnr family9e-0857
NC_008528:331260:344323344323344988666Oenococcus oeni PSU-1, complete genomeCrp-like transcriptional regulator1e-0756.6
NC_013894:1288282:128828212882821289001720Thermocrinis albus DSM 14484 chromosome, complete genometranscriptional regulator, Crp/Fnr family2e-0756.2
NC_012808:3897751:391810639181063918963858Methylobacterium extorquens AM1, complete genomeputative transcriptional regulator, Crp/Fnr family3e-0755.8
NC_015850:1614965:162652416265241627255732Acidithiobacillus caldus SM-1 chromosome, complete genomeCrp/Fnr family transcriptional regulator8e-0754.3
NC_013510:5499447:550096255009625501648687Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, Crp/Fnr family6e-0754.3
NC_015588:2939747:294064829406482941325678Isoptericola variabilis 225 chromosome, complete genometranscriptional regulator, Crp/Fnr family1e-0653.5
NC_008340:1241300:124882812488281249535708Alkalilimnicola ehrlichei MLHE-1, complete genometranscriptional regulator, Crp/Fnr family2e-0652.8
NC_014834:872924:872924872924873628705Rhodopseudomonas palustris DX-1 chromosome, complete genomeCrp/Fnr family transcriptional regulator3e-0652.4
NC_015520:224136:261639261639262313675Mahella australiensis 50-1 BON chromosome, complete genomeCrp/Fnr family transcriptional regulator3e-0652
NC_003078:671000:716513716513717244732Sinorhizobium meliloti 1021 plasmid pSymB, complete sequenceputative transcriptional regulator protein4e-0651.6
NC_016631:4472987:449184544918454492537693Granulicella mallensis MP5ACTX8 chromosome, complete genomeCarD family transcriptional regulator5e-0651.6