Pre_GI: BLASTP Hits

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Query: NC_007948:4646344:4669711 Polaromonas sp. JS666, complete genome

Start: 4669711, End: 4670829, Length: 1119

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015724:339500:3540603540603551751116Cupriavidus necator N-1 plasmid BB2p, complete sequenceopine oxidase subunit B2e-180632
NC_008752:620802:6221756221756233471173Acidovorax avenae subsp. citrulli AAC00-1, complete genomeFAD dependent oxidoreductase6e-102371
NC_015136:2282488:2325858232585823270031146Burkholderia sp. CCGE1001 chromosome 1, complete sequenceFAD dependent oxidoreductase2e-96352
NC_007948:4646344:4661759466175946628951137Polaromonas sp. JS666, complete genomeFAD dependent oxidoreductase3e-93342
NC_011982:206784:2278512278512289211071Agrobacterium vitis S4 plasmid pTiS4, complete sequenceD-nopaline dehydrogenase1e-87323
NC_007948:4558000:4579787457978745809141128Polaromonas sp. JS666, complete genomeFAD dependent oxidoreductase2e-71270
NC_014910:1912552:1933026193302619341861161Alicycliphilus denitrificans BC chromosome, complete genomefad dependent oxidoreductase9e-71267
NC_003308:1:2997829978310961119Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequenceD-nopaline dehydrogenase5e-70265
NC_003065:27163:6338163381644991119Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencenopaline oxidase subunit B5e-70265
NC_009328:3322802:3330853333085333319261074Geobacillus thermodenitrificans NG80-2 chromosome, complete genomesarcosine oxidase subunit beta3e-39162
NC_020210:3341976:3350044335004433511171074Geobacillus sp. GHH01, complete genomesarcosine oxidase subunit beta4e-39162
NC_012792:310443:3104433104433133972955Variovorax paradoxus S110 chromosome 2, complete genomeFAD dependent oxidoreductase2e-30133
NC_009718:643200:6625756625756637471173Fervidobacterium nodosum Rt17-B1, complete genomeFAD dependent oxidoreductase1e-28127
NC_020291:5409587:5419225541922554203521128Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeglycine/D-amino acid oxidase2e-27123
NC_007492:3954345:3993694399369439949531260Pseudomonas fluorescens PfO-1, complete genomeFAD dependent oxidoreductase4e-24112
NC_015172:1075592:1104747110474711058681122Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeGlycine oxidase6e-24112
NC_010676:2793237:2819758281975828208821125Burkholderia phytofirmans PsJN chromosome 2, complete sequenceFAD dependent oxidoreductase1e-23110
NC_017030:4588167:4606880460688046079951116Corallococcus coralloides DSM 2259 chromosome, complete genomeglycine oxidase ThiO1e-23110
NC_007948:4558000:4583587458358745847171131Polaromonas sp. JS666, complete genomeFAD dependent oxidoreductase2e-23110
NC_011144:2674242:2691607269160726927881182Phenylobacterium zucineum HLK1, complete genomeFAD dependent oxidoreductase2e-23110
NC_014815:4621552:4650013465001346511611149Micromonospora sp. L5 chromosome, complete genomefad dependent oxidoreductase2e-22107
NC_016641:2773757:2781634278163427828421209Paenibacillus terrae HPL-003 chromosome, complete genomesarcosine oxidase subunit beta1e-22107
NC_021171:1689518:1704959170495917060681110Bacillus sp. 1NLA3E, complete genomeFAD-dependent glycine oxidase ThiO3e-22106
NC_008027:5842740:5844182584418258454321251Pseudomonas entomophila L48, complete genomehydrogen cyanide synthase HcnC7e-21101
NC_021184:2936244:2944356294435629454771122Desulfotomaculum gibsoniae DSM 7213, complete genomeglycine/D-amino acid oxidase, deaminating3e-2099.8
NC_008391:2404443:2416021241602124171691149Burkholderia cepacia AMMD chromosome 2, complete sequenceFAD dependent oxidoreductase6e-2098.6
NC_013947:4363250:4377230437723043784111182Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeFAD dependent oxidoreductase7e-2098.6
NC_005773:5684000:5706494570649457076481155Pseudomonas syringae pv. phaseolicola 1448A, complete genomeoxidoreductase, FAD-binding1e-1997.4
NC_015740:926920:9394409394409405371098Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeFAD-binding oxidoreductase1e-1790.9
NC_015942:1711026:1727085172708517281761092Acidithiobacillus ferrivorans SS3 chromosome, complete genomeFAD dependent oxidoreductase2e-1790.5
NC_000918:465627:4835834835834846441062Aquifex aeolicus VF5, complete genomehypothetical protein3e-1789.7
NC_009439:1075170:1088508108850810895931086Pseudomonas mendocina ymp, complete genomeglycine oxidase ThiO3e-1789.4
NC_019896:2805098:2830603283060328317121110Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeGlycine oxidase1e-1687.8
NC_010623:1871492:1896546189654618977031158Burkholderia phymatum STM815 chromosome 2, complete sequenceFAD dependent oxidoreductase4e-1686.3
NC_018080:5192264:5197779519777951988551077Pseudomonas aeruginosa DK2 chromosome, complete genomeD-amino acid oxidase5e-1685.5
NC_015556:4118304:4123843412384341249161074Pseudomonas fulva 12-X chromosome, complete genomeglycine oxidase ThiO1e-1584.7
NC_005945:754517:7561427561427572511110Bacillus anthracis str. Sterne, complete genomeglycine oxidase1e-1584.3
NC_014831:2201246:2223388222338822245871200Thermaerobacter marianensis DSM 12885 chromosome, complete genomeglycine oxidase ThiO1e-1584.3
NC_015410:1144272:1156632115663211576961065Pseudomonas mendocina NK-01 chromosome, complete genomeglycine oxidase ThiO7e-1581.6
NC_020829:809457:8109308109308120421113Pseudomonas denitrificans ATCC 13867, complete genomeFAD-dependent oxidoreductase8e-1581.6
NC_008148:2231045:2267216226721622685021287Rubrobacter xylanophilus DSM 9941, complete genomeFAD dependent oxidoreductase8e-1581.6
NC_009434:1068281:108088810808881081748861Pseudomonas stutzeri A1501, complete genomeoxidoreductase, FAD-binding2e-1480.5
NC_007511:1300978:1305473130547313068071335Burkholderia sp. 383 chromosome 2, complete sequenceFAD dependent oxidoreductase2e-1480.1
NC_010730:741842:7791637791637802601098Sulfurihydrogenibium sp. YO3AOP1, complete genomeglycine oxidase ThiO3e-1480.1
NC_003413:1666520:1669331166933116704671137Pyrococcus furiosus DSM 3638, complete genomesarcosine oxidase, subunit beta6e-1479
NC_013523:2560000:2574631257463125757641134Sphaerobacter thermophilus DSM 20745 chromosome 1, complete genomeFAD dependent oxidoreductase1e-1377.4
NC_011901:3363500:3380830338083033819481119Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeglycine oxidase ThiO2e-1376.6
NC_015566:1941407:1941407194140719425311125Serratia sp. AS12 chromosome, complete genomeFAD dependent oxidoreductase3e-1376.3
NC_007005:2686551:2707924270792427091081185Pseudomonas syringae pv. syringae B728a, complete genomeFAD dependent oxidoreductase4e-1375.9
NC_015425:2528549:2545129254512925465621434Clostridium botulinum BKT015925 chromosome, complete genomeFAD-dependent oxidoreductase4e-1375.9
NC_008593:2281896:2294825229482522962581434Clostridium novyi NT, complete genomeglycerol-3-phosphate dehydrogenase1e-1274.3
NC_014394:2228470:2232697223269722337611065Gallionella capsiferriformans ES-2 chromosome, complete genomeglycine oxidase ThiO2e-1273.9
NC_008463:5364428:5368835536883553699291095Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative Glycine/D-amino acid oxidases2e-1273.9
NC_010723:1014334:1021805102180510232351431Clostridium botulinum E3 str. Alaska E43, complete genomeglycerol-3-phosphate dehydrogenase, glpa2e-1273.6
NC_020064:1854589:1854589185458918557041116Serratia marcescens FGI94, complete genomeglycine/D-amino acid oxidase, deaminating5e-1272.4
NC_012483:3731542:3798659379865937997921134Acidobacterium capsulatum ATCC 51196, complete genomeoxidoreductase, FAD-dependent6e-1272
NC_015474:301428:3036243036243047571134Pyrococcus sp. NA2 chromosome, complete genomesarcosine oxidase1e-1171.2
NC_000961:1532245:1534456153445615355891134Pyrococcus horikoshii OT3, complete genomesarcosine oxidase2e-1170.5
NC_002947:4994335:5031207503120750325051299Pseudomonas putida KT2440, complete genomeD-amino acid dehydrogenase small subunit2e-1170.5
NC_019973:5869500:5873692587369258761692478Mesorhizobium australicum WSM2073, complete genomeglycine cleavage system T protein (aminomethyltransferase)3e-1169.7
NC_014923:5940500:5944732594473259472092478Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeFAD dependent oxidoreductase3e-1169.7
NC_015675:6493444:6499403649940365018802478Mesorhizobium opportunistum WSM2075 chromosome, complete genomeFAD dependent oxidoreductase3e-1169.7
NC_003911:633393:6577546577546602612508Silicibacter pomeroyi DSS-3, complete genomeaminomethyl transferase family protein4e-1169.3
NC_016642:1913432:1944993194499319461381146Pseudovibrio sp. FO-BEG1 chromosome, complete genomesarcosine oxidase, beta subunit family protein1e-1068.2
NC_015656:1876627:1879602187960218809211320Frankia symbiont of Datisca glomerata chromosome, complete genomeD-amino-acid dehydrogenase3e-1066.6
NC_003047:3360000:3380522338052233818111290Sinorhizobium meliloti 1021, complete genomePUTATIVE AMINO ACID DEHYDROGENASE TRANSMEMBRANE PROTEIN4e-1066.2
NC_013522:991649:1012936101293610140871152Thermanaerovibrio acidaminovorans DSM 6589, complete genomeFAD dependent oxidoreductase4e-1066.2
NC_014964:557910:5655755655755670831509Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeFAD dependent oxidoreductase4e-1065.9
NC_010321:562494:5701595701595716671509Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeFAD dependent oxidoreductase4e-1065.9
NC_004129:2440744:2453807245380724550481242Pseudomonas fluorescens Pf-5, complete genomeD-amino acid dehydrogenase, small subunit family protein4e-1065.9
NC_013171:312500:3265063265063279811476Anaerococcus prevotii DSM 20548, complete genomeFAD dependent oxidoreductase4e-1065.9
NC_005125:2269343:2288011228801122890661056Gloeobacter violaceus PCC 7421, complete genomeprobable oxidoreductase2e-0963.9
NC_013926:71186:8478584785859421158Aciduliprofundum boonei T469 chromosome, complete genomeFAD dependent oxidoreductase2e-0963.5
NC_013172:3093467:3105958310595831071241167Brachybacterium faecium DSM 4810, complete genomeglycine/D-amino acid oxidase, deaminating3e-0963.2
NC_019908:2312194:2323503232350323249421440Brachyspira pilosicoli P43/6/78 chromosome, complete genomedehydrogenase7e-0962
NC_019978:2036779:2044852204485220463841533Halobacteroides halobius DSM 5150, complete genomeputative dehydrogenase7e-0962
NC_011894:4013830:4028116402811640293511236Methylobacterium nodulans ORS 2060, complete genomeFAD dependent oxidoreductase6e-0962
NC_010511:4258000:4286424428642442876591236Methylobacterium sp. 4-46 chromosome, complete genomeFAD dependent oxidoreductase8e-0961.6
NC_014654:1:1797717977194551479Halanaerobium sp. 'sapolanicus' chromosome, complete genomeFAD dependent oxidoreductase9e-0961.6
NC_002678:5060670:5101501510150151027361236Mesorhizobium loti MAFF303099, complete genomeD-amino acid dehydrogenase, small subunit1e-0861.6
NC_010125:2483122:2509050250905025103031254Gluconacetobacter diazotrophicus PAl 5, complete genomeputative D-amino acid dehydrogenase small subunit1e-0860.8
NC_011365:738321:7623657623657636181254Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeD-amino-acid dehydrogenase2e-0860.5
NC_018607:2231975:2239133223913322405721440Brachyspira pilosicoli B2904 chromosome, complete genomeputative dehydrogenase2e-0860.1
NC_020541:1717140:1719831171983117211111281Rhodanobacter sp. 2APBS1, complete genomeglycine/D-amino acid oxidase, deaminating2e-0860.1
NC_014205:760428:7604287604287615701143Staphylothermus hellenicus DSM 12710 chromosome, complete genomeFAD dependent oxidoreductase3e-0860.1
NC_015424:2316228:2353902235390223551671266Aeromonas veronii B565 chromosome, complete genomeD-amino acid dehydrogenase small subunit4e-0859.7
NC_017243:3093393:3102673310267331041121440Brachyspira intermedia PWS/A chromosome, complete genomedehydrogenase4e-0859.3
NC_016023:1769925:1802942180294218040631122Bacillus coagulans 36D1 chromosome, complete genomeFAD dependent oxidoreductase4e-0859.3
NC_017955:3057592:3064499306449930657191221Modestobacter marinus, complete genomesarcosine oxidase subunit beta4e-0859.3
NC_012225:2247796:2256838225683822582771440Brachyspira hyodysenteriae WA1, complete genomePredicted dehydrogenase6e-0858.9
NC_018000:1914945:1962052196205219633021251Sinorhizobium fredii USDA 257 chromosome, complete genomeD-amino acid dehydrogenase small subunit DadA6e-0858.9
NC_017059:2771085:2790005279000527912491245Rhodospirillum photometricum DSM 122, complete genomeFAD dependent oxidoreductase9e-0858.2
NC_014330:888366:8954888954888969271440Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative dehydrogenase2e-0757.4
NC_015966:1661329:1685595168559516867851191Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeFAD dependent oxidoreductase2e-0757
NC_008027:3844355:3868758386875838698041047Pseudomonas entomophila L48, complete genomeoxidase4e-0756.2
NC_008148:2498000:2507596250759625088371242Rubrobacter xylanophilus DSM 9941, complete genomeFAD dependent oxidoreductase5e-0755.8
NC_011295:246000:2614532614532629431491Coprothermobacter proteolyticus DSM 5265, complete genomeglycerol-3-phosphate dehydrogenase6e-0755.5
NC_007974:1607500:1627722162772216288791158Ralstonia metallidurans CH34 chromosome 2, complete sequenceFAD dependent oxidoreductase7e-0755.5
NC_013757:3012130:3010874301087430121331260Geodermatophilus obscurus DSM 43160, complete genomesarcosine oxidase, beta subunit family7e-0755.5
NC_006624:1208464:1214304121430412157941491Thermococcus kodakarensis KOD1, complete genomeanaerobic glycerol 3-phosphate dehydrogenase8e-0755.1
NC_018604:2350054:2357245235724523586841440Brachyspira pilosicoli WesB complete genomeputative dehydrogenase9e-0755.1
NC_010511:4313769:4313769431376943163002532Methylobacterium sp. 4-46 chromosome, complete genomeFAD dependent oxidoreductase1e-0654.3
NC_015634:2694706:2697119269711926982401122Bacillus coagulans 2-6 chromosome, complete genomeFAD dependent oxidoreductase1e-0654.3
NC_016051:241438:2441492441492453091161Thermococcus sp. AM4 chromosome, complete genomesarcosine oxidase subunit beta1e-0654.3
NC_014654:1802007:1809804180980418112791476Halanaerobium sp. 'sapolanicus' chromosome, complete genomeFAD dependent oxidoreductase2e-0653.9
NC_015559:2745570:2763521276352127647681248Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeSarcosine oxidase2e-0653.5
NC_007794:262402:2663312663312676621332Novosphingobium aromaticivorans DSM 12444, complete genomeFAD dependent oxidoreductase3e-0653.1
NC_000868:269923:2765982765982780911494Pyrococcus abyssi GE5, complete genomeglycerol-3-phosphate dehydrogenase5e-0652.4