Pre_GI: BLASTP Hits

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Query: NC_007492:6372900:6414895 Pseudomonas fluorescens PfO-1, complete genome

Start: 6414895, End: 6417066, Length: 2172

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010501:5735656:5750541575054157527122172Pseudomonas putida W619, complete genomeTn7-like transposition protein B2e-114413
NC_015733:5955467:5969934596993459721022169Pseudomonas putida S16 chromosome, complete genomeTn7-like transposition protein B2e-109397
NC_013921:1915377:1924090192409019262522163Thermoanaerobacter italicus Ab9 chromosome, complete genomeIntegrase catalytic region3e-95350
NC_014657:2127500:2136058213605821382202163Caldicellulosiruptor owensensis OL chromosome, complete genomeintegrase catalytic region3e-93343
NC_015958:2174731:2184442218444221866042163Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeintegrase catalytic subunit6e-93342
NC_014394:1325616:1328977132897713311422166Gallionella capsiferriformans ES-2 chromosome, complete genomeIntegrase catalytic region2e-82307
NC_011206:200000:2065542065542087402187Acidithiobacillus ferrooxidans ATCC 53993, complete genomeTn7-like transposition protein B3e-81303
NC_010634:4463727:4485390448539044875552166Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein6e-73276
NC_010625:1602191:1614741161474116169272187Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencehypothetical protein2e-71271
NC_015740:4508375:4518273451827345203332061Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeintegrase core domain-containing protein3e-70267
NC_010718:237962:2568042568042589572154Natranaerobius thermophilus JW/NM-WN-LF, complete genomeIntegrase catalytic region2e-66254
NC_010995:4525119:4548733454873345508442112Cellvibrio japonicus Ueda107, complete genomeTn7-Cj, transposase protein TnsB3e-62240
NC_017328:3935185:3955764395576439578722109Shigella flexneri 2002017 chromosome, complete genomeTransposon Tn7 transposition protein tnsB1e-61238
NC_007384:4095016:4101517410151741036252109Shigella sonnei Ss046, complete genomeputative transposase1e-61238
NC_006512:2789098:2812068281206828141462079Idiomarina loihiensis L2TR, complete genomeTransposon Tn7 transposition protein tnsB3e-61237
NC_014844:2721746:2729872272987227319592088Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeintegrase catalytic subunit3e-60233
NC_015851:89006:1057801057801078552076Acidithiobacillus caldus SM-1 megaplasmid, complete sequencetransposon Tn7 transposition protein tnsB6e-60233
NC_009349:3396:1164611646138292184Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeTn7-like transposition protein B3e-56220
NC_015572:4916430:4936848493684849389292082Methylomonas methanica MC09 chromosome, complete genomeintegrase catalytic subunit2e-53211
NC_007974:2048000:2057521205752120596982178Ralstonia metallidurans CH34 chromosome 2, complete sequencehypothetical protein7e-53209
NC_009052:5089963:5100587510058751026592073Shewanella baltica OS155, complete genomeIntegrase, catalytic region9e-50198
NC_009659:3815966:3836600383660038388252226Janthinobacterium sp. Marseille chromosome, complete genomeTn7-like transposition protein B8e-47189
NC_011748:3983432:3998093399809340002162124Escherichia coli 55989, complete genomeTn7-like transposition protein TnsB2e-45184
CU928145:3983432:3998093399809340002162124Escherichia coli 55989 chromosome, complete genomeTn7-like transposition protein TnsB2e-45184
NC_009838:81913:1099931099931121162124Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequenceTnsB2e-45184
NC_014121:5000069:5014584501458450166622079Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeTn7-like transposition protein TnsB5e-44179
NC_014394:3114648:3124852312485231270952244Gallionella capsiferriformans ES-2 chromosome, complete genomeTn7-like transposition protein B2e-43178
NC_015497:4564339:4570940457094045731082169Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genometransposon Tn7 transposition protein TnsB9e-43175
NC_014118:987889:1028596102859610310222427Burkholderia sp. CCGE1002 chromosome chromosome 2, completehypothetical protein6e-40166
NC_005773:5149768:5173332517333251754492118Pseudomonas syringae pv. phaseolicola 1448A, complete genometransposon Tn7-like transposase protein B8e-38159
NC_010623:2057467:2057467205746720598872421Burkholderia phymatum STM815 chromosome 2, complete sequencehypothetical protein1e-32142
NC_007908:1252189:1260390126039012626362247Rhodoferax ferrireducens T118, complete genomehypothetical protein1e-27125
NC_016616:1091606:1121239112123911236112373Dechlorosoma suillum PS chromosome, complete genomehypothetical protein3e-25117
NC_007575:1663088:1667067166706716689231857Sulfurimonas denitrificans DSM 1251, complete genomeintegrase catalytic subunit4e-1997.1
NC_014366:3555425:3567950356795035698481899Gamma proteobacterium HdN1, complete genomeIntegrase, catalytic region3e-1894.4
NC_016616:915755:9399229399229418231902Dechlorosoma suillum PS chromosome, complete genomeintegrase family protein8e-1789.7
NC_016901:2594942:2614389261438926163231935Shewanella baltica OS678 chromosome, complete genomeintegrase catalytic subunit3e-1687.4
NC_009997:2635025:2654472265447226564061935Shewanella baltica OS195, complete genomeIntegrase catalytic region3e-1687.4
NC_015572:1:1358813588155761989Methylomonas methanica MC09 chromosome, complete genomeintegrase catalytic subunit8e-1686.3
NC_014539:1:1839118391203521962Burkholderia sp. CCGE1003 chromosome 1, complete sequenceintegrase catalytic subunit2e-1481.3
NC_009348:1064664:1073012107301210748921881Aeromonas salmonicida subsp. salmonicida A449, complete genomeTniA transposase3e-1481.3
NC_002678:5060670:5088718508871850903251608Mesorhizobium loti MAFF303099, complete genometransposase3e-1480.9
NC_007520:407627:4259384259384278481911Thiomicrospira crunogena XCL-2, complete genomeIntegrase, catalytic region9e-1479.3
NC_017986:1885613:1888422188842218901011680Pseudomonas putida ND6 chromosome, complete genomeTniA2e-1378.6
NC_015161:1748236:1755388175538817573311944Deinococcus proteolyticus MRP chromosome, complete genomehypothetical protein3e-1377.8
NC_014215:2259290:2281505228150522832051701Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,TniA protein4e-1377.4
NC_009656:3127240:3138806313880631406501845Pseudomonas aeruginosa PA7 chromosome, complete genomeintegrase catalytic subunit5e-1376.6
NC_007498:134442:1538771538771557541878Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein9e-1376.3
NC_012968:63898:7520175201771921992Methylotenera mobilis JLW8, complete genomeIntegrase catalytic region1e-1172.4
NC_010939:405477:4235454235454254731929Actinobacillus pleuropneumoniae serovar 7 str. AP76, completePutative transposase1e-1172.4
NC_013235:3913000:3930560393056039322241665Nakamurella multipartita DSM 44233, complete genomeIntegrase catalytic region1e-1172.4
NC_011761:2217632:2229241222924122311211881Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completetransposon transposition protein B2e-1171.6
NC_010120:1065833:1074745107474510762891545Neisseria meningitidis 053442, complete genomeconserved hypothetical protein3e-1171.2
NC_008577:4611431:4638394463839446402471854Shewanella sp. ANA-3 chromosome 1, complete sequenceIntegrase, catalytic region1e-1069.3
NC_002947:8394:1713317133191662034Pseudomonas putida KT2440, complete genometransposase, putative1e-1068.9
NC_014752:1063506:1072340107234010735271188Neisseria lactamica ST-640, complete genomeintegrase1e-1068.9
NC_010501:1:80668066100241959Pseudomonas putida W619, complete genomeIntegrase catalytic region1e-1068.9
NC_009512:1:80468046100041959Pseudomonas putida F1, complete genomeIntegrase, catalytic region1e-1068.9
NC_010322:1:88288828107861959Pseudomonas putida GB-1 chromosome, complete genomeintegrase catalytic subunit1e-1068.9
NC_016616:2644883:2650240265024026519221683Dechlorosoma suillum PS chromosome, complete genomeMu transposase/integrase2e-1068.6
NC_012440:1215838:1236077123607712379361860Persephonella marina EX-H1, complete genomeTniA transposase4e-1067.4
NC_007912:231817:2359352359352377701836Saccharophagus degradans 2-40, complete genomeUrease, beta subunit9e-1066.2
NC_007413:1405817:1407584140758414092661683Anabaena variabilis ATCC 29413, complete genomeIntegrase, catalytic region9e-1066.2
NC_009659:3384997:3399629339962934014611833Janthinobacterium sp. Marseille chromosome, complete genometransposase2e-0965.5
NC_019673:6394319:6402870640287064042431374Saccharothrix espanaensis DSM 44229 complete genomeputative integrase3e-0964.7
NC_016860:4055117:4082776408277640844551680Salmonella enterica subsp. enterica serovar Typhimurium strputative transposase TniA2e-0964.7
NC_008782:1277117:1296668129666812983381671Acidovorax sp. JS42, complete genomeIntegrase, catalytic region2e-0964.7
NC_009349:78000:8685886858885731716Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeTniA protein3e-0964.3
NC_004578:20738:3397833978359331956Pseudomonas syringae pv. tomato str. DC3000, complete genometransposase3e-0964.3
NC_014924:1701952:1709896170989617112961401Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeIntegrase catalytic region3e-0964.3
NC_009254:637952:6919556919556935831629Burkholderia vietnamiensis G4 chromosome 3, complete sequenceintegrase catalytic subunit4e-0963.9
NC_020409:2222000:2225628222562822275471920Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeIntegrase catalytic region7e-0963.2
NC_015572:1:4276342763446431881Methylomonas methanica MC09 chromosome, complete genomeintegrase catalytic subunit9e-0962.8
NC_003384:157158:1693331693331706191287Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid2e-0862
NC_013365:92973:1039281039281051961269Escherichia coli O111:H- str. 11128 plasmid pO111_1, completeTniA protein2e-0862
NC_007509:3668:2569725697276461950Burkholderia sp. 383 chromosome 3, complete sequencehypothetical protein2e-0862
NC_008543:90312:99641996411014401800Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceIntegrase, catalytic region3e-0861.2
NC_008061:2153495:2168333216833321701321800Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceIntegrase, catalytic region3e-0861.2
NC_012856:2633890:2649928264992826518261899Ralstonia pickettii 12D chromosome 1, complete genomeTniA transposase4e-0860.8
NC_012856:207194:2113422113422132341893Ralstonia pickettii 12D chromosome 1, complete genomeIntegrase catalytic region4e-0860.5
NC_013166:32474:3602436024378921869Kangiella koreensis DSM 16069, complete genomeTransposase-like Mu4e-0860.5
NC_017986:5833819:5844511584451158462291719Pseudomonas putida ND6 chromosome, complete genomeintegrase catalytic subunit5e-0860.1
NC_010002:1879220:1892059189205918940111953Delftia acidovorans SPH-1, complete genomehypothetical protein7e-0859.7
NC_010682:3033646:3051516305151630534381923Ralstonia pickettii 12J chromosome 1, complete sequenceTniA transposase2e-0758.2
NC_010682:1763769:1768716176871617706381923Ralstonia pickettii 12J chromosome 1, complete sequenceTniA transposase2e-0758.2
NC_009349:78000:817558175510125019496Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete3e-0757.8
NC_019973:6102442:6121481612148161237392259Mesorhizobium australicum WSM2073, complete genomeintegrase family protein5e-0757
NC_007517:3430237:3435106343510634370161911Geobacter metallireducens GS-15, complete genometransposase3e-0654.7