Pre_GI: BLASTP Hits

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Query: NC_006905:4638707:4662789 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 4662789, End: 4664420, Length: 1632

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004631:4687270:4702025470202547036531629Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein01117
NC_011294:4560902:4582673458267345843041632Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein01112
NC_011274:4538722:4560491456049145621221632Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein01111
NC_011205:4718239:4739999473999947416241626Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853SAM-dependent methyltransferase01111
NC_010102:4745949:4759504475950447611291626Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein01111
NC_011149:4677412:4710823471082347124481626Salmonella enterica subsp. enterica serovar Agona str. SL483,methyltransferase domain family01108
NC_011080:4703266:4724514472451447261391626Salmonella enterica subsp. enterica serovar Newport str. SL254,putative SAM-dependent methyltransferase01107
NC_011147:4460726:4491596449159644932211626Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein01096
NC_011283:5011497:5011497501149750131341638Klebsiella pneumoniae 342 chromosome, complete genomemethyltransferase family protein0890
NC_014121:1101093:112295611229561123702747Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein3e-125449
NC_000913:4528278:453046045304604531206747Escherichia coli K12, complete genomeKpLE2 phage-like element; predicted methyltransferase9e-119427
NC_010473:4630361:463226846322684633014747Escherichia coli str. K-12 substr. DH10B, complete genomeKpLE2 phage-like element; predicted methyltransferase9e-119427
NC_011751:5070597:507059750705975071343747Escherichia coli UMN026 chromosome, complete genomeputative methyltransferase; KpLE2 phage-like element9e-119427
AC_000091:4534935:453711745371174537863747Escherichia coli W3110 DNA, complete genomepredicted methyltransferase9e-119427
NC_011742:4873351:487525848752584876004747Escherichia coli S88 chromosome, complete genomemethyltransferase; KpLE2 phage-like element9e-119427
NC_012759:4467288:446919544691954469941747Escherichia coli BW2952 chromosome, complete genomeKpLE2 phage-like element; putative methyltransferase9e-119427
NC_012947:3883484:390078739007873901533747Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completemethyltransferase type 119e-119427
NC_012967:4510393:451257545125754513321747Escherichia coli B str. REL606 chromosome, complete genomeputative methyltransferase9e-119427
NC_016514:506611:530753530753531532780Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YjhP5e-118425
NC_015663:3586836:359333935933393594097759Enterobacter aerogenes KCTC 2190 chromosome, complete genomemethyltransferase family protein4e-112405
NC_012691:779826:783679783679784425747Tolumonas auensis DSM 9187, complete genomeMethyltransferase type 111e-104380
NC_013960:2366910:238036923803692381115747Nitrosococcus halophilus Nc4 chromosome, complete genomemethyltransferase type 111e-104380
NC_007517:3151742:315734931573493158095747Geobacter metallireducens GS-15, complete genomehypothetical protein2e-104379
NC_015388:2143329:214921421492142149960747Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeMethyltransferase type 111e-103377
NC_007404:1126756:113475711347571135503747Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein3e-103376
NC_012560:4929683:494048149404814941245765Azotobacter vinelandii DJ, complete genomehypothetical protein3e-103376
NC_021150:4929670:494046849404684941232765Azotobacter vinelandii CA6, complete genomehypothetical protein3e-103376
NC_008702:4064470:406765640676564068402747Azoarcus sp. BH72, complete genomeconserved hypothetical protein3e-103376
NC_009648:293052:293052293052293801750Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeKpLE2 phage-like element; putative methyltransferase1e-102374
NC_017075:1233377:124528812452881246064777Rubrivivax gelatinosus IL144, complete genometype 12 methyltransferase4e-102372
NC_017059:3355006:336490833649083365660753Rhodospirillum photometricum DSM 122, complete genomeMethyltransferase4e-99362
NC_018524:4848154:489364648936464894392747Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehypothetical protein2e-92340
NC_014507:245344:263605263605264447843Methanoplanus petrolearius DSM 11571 chromosome, complete genometype 11 methyltransferase2e-29130
NC_014023:24000:428054280543554750Bacillus megaterium QM B1551 plasmid pBM700, complete sequencehypothetical protein7e-27122
NC_016113:994469:100303310030331003770738Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencehypothetical protein2e-1894.4
NC_016628:133841:151600151600152439840Vibrio furnissii NCTC 11218 chromosome 2, complete sequencetype 12 methyltransferase4e-1893.2
NC_013595:1851226:186455718645571865300744Streptosporangium roseum DSM 43021, complete genomehypothetical protein2e-1790.9
NC_012880:3645304:365042336504233651244822Dickeya dadantii Ech703, complete genomeMethyltransferase type 112e-1687.4
NC_003155:777216:778334778334779140807Streptomyces avermitilis MA-4680, complete genomehypothetical protein1e-1379
NC_014623:5181000:519824051982405198983744Stigmatella aurantiaca DW4/3-1 chromosome, complete genomemethyltransferase type 11 domain-containing protein2e-1171.2
NC_014836:1052214:106436810643681065174807Desulfurispirillum indicum S5 chromosome, complete genometype 11 methyltransferase8e-1168.9
NC_015680:691457:709588709588710331744Pyrococcus yayanosii CH1 chromosome, complete genomeSAM-dependent methyltransferase1e-1068.9
NC_012804:1431465:143703214370321438015984Thermococcus gammatolerans EJ3, complete genomeSAM-dependent methyltransferase2e-0964.7
NC_010814:3621215:362852836285283629277750Geobacter lovleyi SZ, complete genomeMethyltransferase type 113e-0963.9
NC_008262:67711:831608316083963804Clostridium perfringens SM101, complete genomeputative methyltransferase4e-0963.5
NC_009921:1813500:182733118273311828086756Frankia sp. EAN1pec, complete genomeMethyltransferase type 114e-0963.2
NC_003366:2556457:257088625708862571689804Clostridium perfringens str. 13, complete genomeprobable S-adenosylmethionine-dependent methltransferase4e-0963.2
NC_014315:2327083:233100023310002331731732Nitrosococcus watsoni C-113 chromosome, complete genomeubiquinone biosynthesis O-methyltransferase6e-0963.2
NC_013716:2476334:247633424763342477062729Citrobacter rodentium ICC168, complete genome3-demethylubiquinone-9 3-methyltransferase7e-0962.8
NC_010939:321492:322552322552323256705Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete3-demethylubiquinone-9 3-methyltransferase1e-0861.6
NC_015680:1475917:149444214944421495170729Pyrococcus yayanosii CH1 chromosome, complete genomesterol biosynthesis methyltransferase-like protein2e-0861.2
NC_014335:2274774:229653322965332297243711Bacillus cereus biovar anthracis str. CI chromosome, completemethyltransferase2e-0861.2
NC_013456:1819421:183048718304871831119633Vibrio sp. Ex25 chromosome 1, complete genomemethyltransferase3e-0860.8
NC_007759:2146254:215537421553742156369996Syntrophus aciditrophicus SB, complete genomemethyltransferase4e-0860.5
NC_009615:3993187:400179340017934002590798Parabacteroides distasonis ATCC 8503 chromosome, complete genomemethyltransferase4e-0860.1
NC_017030:4146937:415407241540724154809738Corallococcus coralloides DSM 2259 chromosome, complete genomemethyltransferase5e-0859.7
NC_009053:313779:314720314720315424705Actinobacillus pleuropneumoniae L20, complete genome3-demethylubiquinone-9 3-methyltransferase6e-0859.7
NC_012804:1940500:194050519405051941191687Thermococcus gammatolerans EJ3, complete genomeSAM-dependent methyltransferase, ubiE/COQ5 family8e-0859.3
NC_010278:315941:317627317627318364738Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,3-demethylubiquinone-9 3-methyltransferase1e-0758.9
NC_013364:2898964:292303529230352923757723Escherichia coli O111:H- str. 11128, complete genomebifunctional 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase UbiG1e-0758.5
NC_013202:1367447:138474113847411385493753Halomicrobium mukohataei DSM 12286, complete genomeMethyltransferase type 112e-0758.2
NC_007406:2615916:263149226314922632145654Nitrobacter winogradskyi Nb-255, complete genomehypothetical protein2e-0758.2
NC_006624:2016000:203209420320942032780687Thermococcus kodakarensis KOD1, complete genomeSAM-dependent methyltransferase, UbiE/COQ5 family2e-0758.2
NC_007759:2315490:231890023189002319685786Syntrophus aciditrophicus SB, complete genomeSAM-dependent methyltransferase1e-0758.2
NC_007404:974461:100643910064391007137699Thiobacillus denitrificans ATCC 25259, complete genome3-demethylubiquinone-9 3-methyltransferase2e-0757.8
NC_010718:2265447:229465222946522295404753Natranaerobius thermophilus JW/NM-WN-LF, complete genomeMethyltransferase type 113e-0757.4
NC_002967:2507993:252328125232812524042762Treponema denticola ATCC 35405, complete genomehypothetical protein3e-0757
NC_016111:1546505:156020715602071561055849Streptomyces cattleya NRRL 8057, complete genomeD-glucose O-methyltransferase5e-0756.6
NC_015474:644552:663695663695664381687Pyrococcus sp. NA2 chromosome, complete genomesterol biosynthesis methyltransferase related protein5e-0756.6
NC_009092:4585784:458873645887364589518783Shewanella loihica PV-4, complete genomeubiquinone biosynthesis O-methyltransferase7e-0756.2
NC_020911:4428000:443902044390204439730711Octadecabacter antarcticus 307, complete genome3-demethylubiquinone-9 3-methyltransferase UbiG9e-0755.8
NC_015416:1542202:155808115580811558869789Methanosaeta concilii GP-6 chromosome, complete genomemethyltransferase1e-0655.5
NC_013131:4525075:4525075452507545263611287Catenulispora acidiphila DSM 44928, complete genomeCyclopropane-fatty-acyl-phospholipid synthase2e-0654.7
NC_009091:1423677:142898614289861429918933Prochlorococcus marinus str. MIT 9301, complete genomeSAM (and some other nucleotide) binding motif2e-0654.7
NC_009953:2342500:234302023430202343748729Salinispora arenicola CNS-205 chromosome, complete genometype 12 methyltransferase2e-0654.7
NC_008702:2892605:291301429130142913775762Azoarcus sp. BH72, complete genomeprobable trans-aconitate 2-methyltransferase2e-0654.7
NC_014311:2606434:260572126057212606437717Ralstonia solanacearum PSI07 chromosome, complete genomebifunctional 3-demethylubiquinone-9 3-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase2e-0654.3
NC_014840:205723:230082230082230753672Pantoea sp. At-9b plasmid pPAT9B03, complete sequencemethyltransferase type 112e-0654.3
NC_003272:3148687:315607231560723156950879Nostoc sp. PCC 7120, complete genomehypothetical protein2e-0654.3
NC_017078:179848:196570196570197313744Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1,putative methyltransferase3e-0653.9
NC_011742:1574036:159300815930081593766759Escherichia coli S88 chromosome, complete genometrans-aconitate 2-methyltransferase3e-0653.9
NC_008253:1534840:155279515527951553553759Escherichia coli 536, complete genometrans-aconitate 2-methyltransferase3e-0653.9
NC_016894:2809125:282244528224452823188744Acetobacterium woodii DSM 1030 chromosome, complete genomemethyltransferase4e-0653.5
NC_013730:3137391:315058331505833151362780Spirosoma linguale DSM 74, complete genomeMethyltransferase type 115e-0653.1
NC_014006:850763:9083969083969096371242Sphingobium japonicum UT26S chromosome 1, complete genomecyclopropane-fatty-acyl-phospholipid synthase6e-0653.1
NC_014831:388007:3936463936463950761431Thermaerobacter marianensis DSM 12885 chromosome, complete genomeMethyltransferase type 116e-0652.8