Pre_GI: BLASTP Hits

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Query: NC_006510:2044347:2055331 Geobacillus kaustophilus HTA426, complete genome

Start: 2055331, End: 2056437, Length: 1107

Host Lineage: Geobacillus kaustophilus; Geobacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Geobacillus kaustophilus strain HTA426 was first isolated from deep sea sediment of the Mariana Trench in the Pacific Ocean and belongs to a closely related group of thermophilic Bacillus spp. Members of this genus were originally classified as Bacillus. Recent rDNA analysis and DNA-DNA hybridization studies using spore-forming thermophilic subsurface isolates provided enough evidence to define the phylogenetically distinct, physiologically and morphologically consistent taxon Geobacillus. Geobacillus species are chemo-organotrophic, obligately thermophilic, motile, spore-forming, aerobic or facultatively anaerobic. This organism was compared with mesophilic Bacillus spp. to identify genome characteristics and specific genes related to thermophilia. Analysis of the amino acid compositions showed clear differences between Geobacillus kaustophilus and the mesophilic bacilli. In addition, the higher G+C content in Geobacillus kaustophilus rRNA also appears correlated to thermophilia. In addition, tRNA modification by the Geobacillus kaustophilus specific tRNA methyltransferases probably aids in the thermoadaptation of this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009328:3322802:3336523333652333376141092Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeABC transporter substrate-binding protein2e-58226
NC_020210:3341976:3355714335571433568021089Geobacillus sp. GHH01, complete genomespermidine/putrescine ABC transporter substrate-binding protein6e-58224
NC_007948:4646344:4665793466579346668211029Polaromonas sp. JS666, complete genomeextracellular solute-binding protein, family 13e-32139
NC_008391:2404443:2414978241497824160241047Burkholderia cepacia AMMD chromosome 2, complete sequenceextracellular solute-binding protein, family 15e-30132
NC_007948:4646344:4656182465618246572251044Polaromonas sp. JS666, complete genomeextracellular solute-binding protein, family 12e-28126
NC_016590:1380092:1381197138119713823421146Burkholderia sp. YI23 chromosome 3, complete sequenceextracellular solute-binding protein2e-27124
NC_007005:2686551:2706875270687527079271053Pseudomonas syringae pv. syringae B728a, complete genomeextracellular solute-binding protein, family 12e-24113
NC_007948:4620661:4621821462182146228641044Polaromonas sp. JS666, complete genomeextracellular solute-binding protein, family 16e-24111
NC_008314:477722:5138795138795149041026Ralstonia eutropha H16 chromosome 2, complete sequenceABC-type transporter, periplasmic component: POPT family1e-1997.8
NC_014122:967194:9842959842959853201026Methanocaldococcus infernus ME chromosome, complete genomeextracellular solute-binding protein family 18e-1788.2
NC_008054:1815723:1828034182803418290951062Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeSpermidine/putrescine ABC transporter, substrate binding protein2e-1687
NC_007929:111092:1330981330981341831086Lactobacillus salivarius subsp. salivarius UCC118, complete genomeSpermidine/putrescine-binding protein5e-1685.5
NC_016641:1148220:1148220114822011492931074Paenibacillus terrae HPL-003 chromosome, complete genomeABC transporter substrate-binding protein8e-1685.1
NC_009012:1901492:1919023191902319201291107Clostridium thermocellum ATCC 27405, complete genomeextracellular solute-binding protein, family 12e-1583.6
NC_014483:5015890:5018463501846350195361074Paenibacillus polymyxa E681 chromosome, complete genomeSpermidine/putrescine-binding periplasmic protein2e-1583.6
NC_015680:930483:9469259469259479681044Pyrococcus yayanosii CH1 chromosome, complete genomethiamine-binding periplasmic protein2e-1583.6
NC_014364:1990000:2000764200076420018251062Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 18e-1581.6
NC_013716:1298932:1302979130297913040251047Citrobacter rodentium ICC168, complete genomespermidine/putrescine ABC transporter, substrate-binding protein9e-1581.6
NC_014718:791528:8012338012338023361104Burkholderia rhizoxinica HKI 454 chromosome, complete genomeABC transporter substrate-binding protein3e-1479.7
NC_014166:2149984:2168859216885921698811023Arcobacter nitrofigilis DSM 7299 chromosome, complete genomefamily 1 extracellular solute-binding protein3e-1479.7
NC_019897:3810000:3812967381296738140371071Thermobacillus composti KWC4 chromosome, complete genomespermidine/putrescine-binding periplasmic protein4e-1479.3
NC_004461:779000:7919067919067929791074Staphylococcus epidermidis ATCC 12228, complete genomepotD protein4e-1479.3
NC_010498:1995500:2023681202368120247271047Escherichia coli SMS-3-5, complete genomespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein5e-1479
NC_008309:1289370:1310334131033413114191086Haemophilus somnus 129PT, complete genomespermidine/putrescine-binding periplasmic protein5e-1479
NC_016593:762216:7679087679087689811074Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completespermidine/putrescine-binding periplasmic protein7e-1478.6
NC_015381:1318818:1321712132171213227671056Burkholderia gladioli BSR3 chromosome 1, complete sequenceextracellular solute-binding protein1e-1378.2
NC_010519:1802294:1824678182467818257631086Haemophilus somnus 2336 chromosome, complete genomeextracellular solute-binding protein1e-1377.8
NC_012962:869295:8692958692958703261032Photorhabdus asymbiotica, complete genomeperiplasmic ferric iron-binding protein (putative periplasmic-iron binding protein)3e-1376.6
NC_014206:2941575:2955729295572929568021074Geobacillus sp. C56-T3 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-1376.6
NC_007948:4558000:4592642459264245937211080Polaromonas sp. JS666, complete genomeputative ABC transport system, substrate-binding exported protein3e-1376.3
NC_006510:746814:7525867525867536591074Geobacillus kaustophilus HTA426, complete genomespermidine/putrescine ABC transporter (substrate-binding protein)5e-1375.9
NC_017218:178564:2034882034882046121125Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeABC transporter substrate-binding protein2e-1273.6
NC_012563:1348500:1363689136368913647351047Clostridium botulinum A2 str. Kyoto, complete genomeABC transporter, substrate-binding protein3e-1273.2
NC_020134:1328302:1342631134263113436891059Clostridium stercorarium subsp. stercorarium DSM 8532, completespermidine/putrescine transport system substarte-binding protein PotD5e-1272.4
NC_008312:4358134:4377026437702643780901065Trichodesmium erythraeum IMS101, complete genomeextracellular solute-binding protein, family 16e-1272
NC_012914:469117:4691174691174701871071Paenibacillus sp. JDR-2, complete genomeextracellular solute-binding protein family 12e-1170.5
NC_011000:1216430:1220139122013912211671029Burkholderia cenocepacia J2315 chromosome 1, complete sequenceextracellular solute-binding protein2e-1170.1
NC_012668:2115228:2119984211998421210301047Vibrio cholerae MJ-1236 chromosome 1, complete sequenceABC transporter periplasmic spermidine putrescine-binding protein PotD3e-1169.7
NC_016944:1504888:1520069152006915211001032Vibrio cholerae IEC224 chromosome I, complete sequencespermidine/putrescine transport system substrate-binding protein3e-1169.7
NC_016445:984856:1000036100003610010671032Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein3e-1169.7
NC_012578:1465302:1480483148048314815831101Vibrio cholerae M66-2 chromosome I, complete sequencespermidine/putrescine ABC transporter substrate-binding protein4e-1169.3
NC_002505:1507860:1523041152304115241411101Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein4e-1169.3
NC_014166:2649444:2664773266477326657801008Arcobacter nitrofigilis DSM 7299 chromosome, complete genomefamily 1 extracellular solute-binding protein7e-1168.6
NC_010939:405477:4411834411834422651083Actinobacillus pleuropneumoniae serovar 7 str. AP76, completespermidine/putrescine-binding periplasmic protein 1 precursor7e-1168.6
NC_009457:1068000:1081457108145710825571101Vibrio cholerae O395 chromosome 2, complete sequencespermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein2e-1067.4
NC_018681:6977670:6992751699275169938241074Nocardia brasiliensis ATCC 700358 chromosome, complete genome2-aminoethylphosphonate ABC transporter substrate-binding protein3e-1066.6
NC_009922:2721343:2741311274131127423571047Alkaliphilus oremlandii OhILAs, complete genomeextracellular solute-binding protein family 12e-1066.6
NC_010278:398521:4181284181284192101083Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,spermidine/putrescine-binding periplasmic protein6e-1065.5
NC_009053:393700:4134014134014144831083Actinobacillus pleuropneumoniae L20, complete genomespermidine/putrescine-binding periplasmic protein 1 precursor6e-1065.5
NC_011985:194973:2123562123562133961041Agrobacterium radiobacter K84 chromosome 1, complete genomespermidine/putrescine ABC transporter9e-1065.1
NC_008309:1155218:1155218115521811562551038Haemophilus somnus 129PT, complete genomespermidine/putrescine-binding periplasmic protein1e-0964.7
NC_014010:1850500:1899804189980419008741071Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeABC transporter substrate-binding protein6e-0962
NC_014735:149922:1499221499221510611140Halogeometricum borinquense DSM 11551 plasmid pHBOR01, completeABC-type Fe3+ transport system, periplasmic component2e-0860.8
NC_009718:1470972:1474505147450514755391035Fervidobacterium nodosum Rt17-B1, complete genomeextracellular solute-binding protein2e-0860.5
NC_012225:1015452:1022782102278210238101029Brachyspira hyodysenteriae WA1, complete genomeperiplasmic-iron-binding protein BitB6e-0858.9
NC_016048:1930089:1955292195529219563651074Oscillibacter valericigenes Sjm18-20, complete genomespermidine/putrescine ABC transporter spermidine/putrescine-binding protein1e-0757.8
NC_015683:241377:2606732606732616741002Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein2e-0757.4
NC_012225:1015452:1023891102389110249101020Brachyspira hyodysenteriae WA1, complete genomeperiplasmic-iron-binding protein BitC2e-0757.4
NC_014217:3024961:3027856302785630289861131Starkeya novella DSM 506 chromosome, complete genomeextracellular solute-binding protein family 12e-0757.4
NC_013172:542896:5511245511245522031080Brachybacterium faecium DSM 4810, complete genomeABC-type Fe3+ transport system, periplasmic component2e-0757
NC_014306:2476316:2497276249727624983041029Erwinia billingiae Eb661, complete genomeABC transporter, periplasmic substrate-binding protein3e-0756.6
NC_013858:416000:4519414519414530321092Azospirillum sp. B510 plasmid pAB510d, complete sequencespermidine/putrescine transport system substrate-binding protein4e-0756.2
NC_017297:1280963:129455712945571295387831Clostridium botulinum F str. 230613 chromosome, complete genomeABC transporter substrate-binding protein4e-0756.2
NC_007604:1442500:1460847146084714618691023Synechococcus elongatus PCC 7942, complete genomeiron transport system substrate-binding protein7e-0755.5
NC_012880:3748665:378308237830823784059978Dickeya dadantii Ech703, complete genomeextracellular solute-binding protein family 15e-0755.5
NC_010067:892729:902946902946903923978Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-0653.1
NC_013315:3214063:3218106321810632192271122Clostridium difficile CD196 chromosome, complete genomeABC transporter substrate-binding protein3e-0653.1
NC_017179:3222015:3226058322605832271071050Clostridium difficile BI1, complete genomeABC transporter substrate-binding protein4e-0652.8
NC_008209:253663:2723772723772734831107Roseobacter denitrificans OCh 114, complete genomespermidine/putrescine-binding periplasmic protein, putative5e-0652.4
NC_016612:3361802:3379230337923033803421113Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputrescine ABC transporter periplasmic-binding protein6e-0652
NC_016932:175872:191788191788192777990Corynebacterium pseudotuberculosis 316 chromosome, complete genomeSpermidine/putrescine-binding periplasmic protein7e-0652
NC_001263:243000:2635362635362645671032Deinococcus radiodurans R1 chromosome 1, complete sequenceABC transporter, periplasmic substrate-binding protein, solute-binding family 18e-0652
NC_015376:965000:9682399682399692551017Burkholderia gladioli BSR3 chromosome chromosome 2, completeextracellular solute-binding family protein 158e-0652