Pre_GI: BLASTP Hits

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Query: NC_006510:1995916:2001923 Geobacillus kaustophilus HTA426, complete genome

Start: 2001923, End: 2003089, Length: 1167

Host Lineage: Geobacillus kaustophilus; Geobacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Geobacillus kaustophilus strain HTA426 was first isolated from deep sea sediment of the Mariana Trench in the Pacific Ocean and belongs to a closely related group of thermophilic Bacillus spp. Members of this genus were originally classified as Bacillus. Recent rDNA analysis and DNA-DNA hybridization studies using spore-forming thermophilic subsurface isolates provided enough evidence to define the phylogenetically distinct, physiologically and morphologically consistent taxon Geobacillus. Geobacillus species are chemo-organotrophic, obligately thermophilic, motile, spore-forming, aerobic or facultatively anaerobic. This organism was compared with mesophilic Bacillus spp. to identify genome characteristics and specific genes related to thermophilia. Analysis of the amino acid compositions showed clear differences between Geobacillus kaustophilus and the mesophilic bacilli. In addition, the higher G+C content in Geobacillus kaustophilus rRNA also appears correlated to thermophilia. In addition, tRNA modification by the Geobacillus kaustophilus specific tRNA methyltransferases probably aids in the thermoadaptation of this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014206:1618988:1635813163581316369791167Geobacillus sp. C56-T3 chromosome, complete genomealtronate dehydratase0791
NC_010321:1703000:1712227171222717133871161Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completealtronate dehydratase1e-122440
NC_014964:1695000:1704440170444017056001161Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeAltronate dehydratase1e-122440
NC_007503:1111457:1118854111885411200111158Carboxydothermus hydrogenoformans Z-2901, complete genomehydrolase, UxaA family2e-122439
NC_007503:1111457:1147120114712011482801161Carboxydothermus hydrogenoformans Z-2901, complete genomehydrolase, UxaA family1e-118426
NC_019978:1182056:1191155119115511923121158Halobacteroides halobius DSM 5150, complete genomealtronate dehydratase1e-113409
NC_017279:437665:4545134545134556851173Campylobacter jejuni subsp. jejuni IA3902 chromosome, completeputative altronate hydrolase C-terminus3e-108392
NC_017281:433995:4499934499934511591167Campylobacter jejuni subsp. jejuni S3 chromosome, complete genomealtronate hydrolase5e-108391
NC_015151:1218390:1235574123557412367431170Vulcanisaeta moutnovskia 768-28 chromosome, complete genomealtronate dehydratase5e-97354
NC_002578:1434396:1439747143974714409101164Thermoplasma acidophilum DSM 1728, complete genomehypothetical protein8e-81301
CP002797:4603787:4612003461200346135201518Escherichia coli NA114, complete genomePutative altronate hydrolase3e-80298
NC_007912:1231436:1239717123971712412431527Saccharophagus degradans 2-40, complete genomeGlycogen debranching enzyme GlgX5e-78291
NC_008536:1778500:1782949178294917844841536Solibacter usitatus Ellin6076, complete genomeAltronate dehydratase8e-78291
NC_010557:316000:3233493233493249201572Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceAltronate dehydratase6e-75281
NC_015556:1188500:1189983118998311915211539Pseudomonas fulva 12-X chromosome, complete genomeGalactarate dehydratase3e-74279
NC_010501:1868888:1893012189301218945381527Pseudomonas putida W619, complete genomeAltronate dehydratase3e-74278
NC_017275:927814:9479549479549491201167Sulfolobus islandicus HVE10/4 chromosome, complete genomeD-galactarate dehydratase/Altronate hydrolase domain protein3e-69262
NC_015520:2859820:2868031286803128691881158Mahella australiensis 50-1 BON chromosome, complete genomeGalactarate dehydratase6e-69261
NC_015510:5539153:5556960555696055586151656Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeAltronate dehydratase7e-69261
NC_011978:1500663:1506254150625415074081155Thermotoga neapolitana DSM 4359, complete genomehypothetical protein7e-69261
NC_014041:3197192:3198206319820631998221617Zunongwangia profunda SM-A87 chromosome, complete genomealtronate hydrolase3e-67255
NC_009440:1045882:1053649105364910548091161Metallosphaera sedula DSM 5348 chromosome, complete genomeD-galactarate dehydratase/Altronate hydrolase domain-containing protein4e-67255
AC_000091:3258377:3275137327513732767081572Escherichia coli W3110 DNA, complete genome(D)-galactarate dehydrogenase2e-66253
NC_010473:3354052:3371049337104933726201572Escherichia coli str. K-12 substr. DH10B, complete genome(D)-galactarate dehydrogenase2e-66253
NC_000913:3256307:3273304327330432748751572Escherichia coli K12, complete genome(D)-galactarate dehydrogenase2e-66253
NC_012759:3143455:3160452316045231620231572Escherichia coli BW2952 chromosome, complete genome(D)-galactarate dehydrogenase2e-66253
NC_009800:3307123:3323902332390233254731572Escherichia coli HS, complete genomegalactarate dehydratase2e-66253
NC_012947:630757:6307576307576323281572Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completegalactarate dehydratase4e-66252
NC_012967:3191319:3208211320821132097821572Escherichia coli B str. REL606 chromosome, complete genome(D)-galactarate dehydrogenase4e-66252
NC_002695:3994970:4014517401451740160881572Escherichia coli O157:H7 str. Sakai, complete genomeputative hydrolase4e-66252
NC_013941:3884725:3904159390415939057301572Escherichia coli O55:H7 str. CB9615 chromosome, complete genomegalactarate dehydratase4e-66252
NC_009801:3595001:3610159361015936117301572Escherichia coli E24377A, complete genomegalactarate dehydratase3e-66252
CU928145:3608917:3630249363024936318201572Escherichia coli 55989 chromosome, complete genome(D)-galactarate dehydrogenase3e-66252
CU928160:3344746:3361524336152433630951572Escherichia coli IAI1 chromosome, complete genome(D)-galactarate dehydrogenase3e-66252
CP002185:3475991:3492986349298634945571572Escherichia coli W, complete genome(D)-galactarate dehydrogenase3e-66252
NC_011748:3608917:3630249363024936318201572Escherichia coli 55989, complete genome(D)-galactarate dehydrogenase3e-66252
NC_011415:3523364:3543086354308635446571572Escherichia coli SE11 chromosome, complete genomegalactarate dehydratase3e-66252
NC_011741:3344746:3361524336152433630951572Escherichia coli IAI1 chromosome, complete genome(D)-galactarate dehydrogenase3e-66252
NC_013061:1360081:1364522136452213661741653Pedobacter heparinus DSM 2366, complete genomeAltronate dehydratase6e-66251
NC_014844:442380:4468564468564480551200Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeD-galactarate dehydratase/Altronate hydrolase domain-containing protein9e-66251
NC_011750:3768692:3788126378812637896971572Escherichia coli IAI39 chromosome, complete genome(D)-galactarate dehydrogenase2e-65250
NC_010498:3488513:3505118350511835066891572Escherichia coli SMS-3-5, complete genomegalactarate dehydratase2e-65250
NC_011751:3710786:3730222373022237317931572Escherichia coli UMN026 chromosome, complete genome(D)-galactarate dehydrogenase1e-65250
NC_010468:613812:6138126138126153831572Escherichia coli ATCC 8739, complete genomegalactarate dehydratase1e-65250
NC_011894:3797500:3798020379802037993001281Methylobacterium nodulans ORS 2060, complete genomeD-galactarate dehydratase/Altronate hydrolase domain protein3e-63242
NC_014532:2989185:2998060299806029997001641Halomonas elongata DSM 2581, complete genomealtronate dehydratase4e-61235
NC_004337:3249791:3266776326677632683471572Shigella flexneri 2a str. 301, complete genomeputative hydrolase6e-61234
NC_004741:3240909:3257894325789432594651572Shigella flexneri 2a str. 2457T, complete genomeputative hydrolase6e-61234
NC_017328:3289853:3306839330683933084101572Shigella flexneri 2002017 chromosome, complete genomeputative hydrolase6e-61234
NC_013223:2609697:2640716264071626418791164Desulfohalobium retbaense DSM 5692, complete genomeAltronate dehydratase3e-59229
NC_013716:5020204:5045582504558250470691488Citrobacter rodentium ICC168, complete genomealtronate hydrolase9e-58224
NC_015224:3892972:3930051393005139315411491Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,altronate hydrolase1e-55217
NC_020418:1841138:1856838185683818584331596Morganella morganii subsp. morganii KT, complete genomeAltronate hydrolase1e-54214
NC_014166:1008266:1020256102025610217881533Arcobacter nitrofigilis DSM 7299 chromosome, complete genomegalactarate dehydratase2e-51202
NC_015856:268034:2956062956062971801575Collimonas fungivorans Ter331 chromosome, complete genomeD-galactarate dehydratase1e-50200
NC_014541:643604:6652086652086663921185Ferrimonas balearica DSM 9799 chromosome, complete genomeAltronate dehydratase2e-50199
NC_013526:439813:4581814581814608472667Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeAltronate dehydratase2e-38160
NC_004431:1119700:114144611414461141946501Escherichia coli CFT073, complete genome4e-27122
NC_004431:1119700:114196511419651142171207Escherichia coli CFT073, complete genome1e-1171.6