Pre_GI: BLASTP Hits

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Query: NC_006361:3615322:3616695 Nocardia farcinica IFM 10152, complete genome

Start: 3616695, End: 3617288, Length: 594

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016887:2269177:226917722691772269770594Nocardia cyriacigeorgica GUH-2, complete genomeTetR family transcriptional regulator2e-72271
NC_016111:986936:998551998551999183633Streptomyces cattleya NRRL 8057, complete genomeTetR-family transcriptional regulator1e-45182
NC_008699:857837:861721861721862353633Nocardioides sp. JS614, complete genomeregulatory protein, TetR3e-42171
NC_019673:1988853:199366419936641994335672Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, TetR family2e-40164
NC_018581:4992952:500418850041885004799612Gordonia sp. KTR9 chromosome, complete genomeTranscriptional regulator4e-32137
NC_009428:833701:853580853580854185606Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomeTetR family transcriptional regulator4e-2097.8
NC_013205:854983:879742879742880350609Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, TetR family2e-1995.1
NC_014834:2264108:229729222972922298074783Rhodopseudomonas palustris DX-1 chromosome, complete genomeTetR family transcriptional regulator7e-1683.6
NC_010623:1871492:188609818860981886784687Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, TetR family6e-1580.5
NC_011000:1262324:126468212646821265407726Burkholderia cenocepacia J2315 chromosome 1, complete sequenceTetR family regulatory protein9e-1580.1
NC_017904:1725180:174104217410421741812771Mycobacterium sp. MOTT36Y chromosome, complete genomeTetR family transcriptional regulator1e-1479.7
NC_008278:175500:183176183176183766591Frankia alni ACN14a, complete genomeputative Transcriptional regulator3e-1374.7
NC_008278:2732890:274044927404492741114666Frankia alni ACN14a, complete genomehypothetical protein1e-1273.2
NC_009952:2381601:239473623947362395365630Dinoroseobacter shibae DFL 12, complete genometranscriptional regulator3e-1271.6
NC_008740:443274:492649492649493263615Marinobacter aquaeolei VT8, complete genometranscriptional regulator, TetR family5e-1270.9
NC_007953:314872:334745334745335404660Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, TetR family5e-1270.9
NC_010184:5085977:510274051027405103369630Bacillus weihenstephanensis KBAB4, complete genometranscriptional regulator, TetR family3e-1168.2
NC_013595:8553904:856484385648438565427585Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, TetR family4e-1167.8
NC_021171:4674086:468021546802154680892678Bacillus sp. 1NLA3E, complete genomeTetR family transcriptional regulator7e-1167
NC_017208:5305969:532188753218875322516630Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeTetR family transcriptional regulator7e-1167
NC_014758:310394:344457344457345041585Calditerrivibrio nitroreducens DSM 19672 chromosome, completetranscriptional regulator, tetr family8e-1167
NC_011725:5201995:525476552547655255394630Bacillus cereus B4264 chromosome, complete genomeTetR family transcriptional regulator1e-1066.6
NC_011772:5158680:520892252089225209551630Bacillus cereus G9842, complete genometranscriptional regulator, TetR family9e-1166.6
NC_018691:2254566:226531422653142265982669Alcanivorax dieselolei B5 chromosome, complete genomeTranscriptional regulator1e-1066.2
NC_012472:5094009:510921551092155109844630Bacillus cereus 03BB102, complete genometranscriptional regulator, TetR family1e-1066.2
NC_005945:5053000:506951050695105070139630Bacillus anthracis str. Sterne, complete genometranscriptional regulator, TetR family1e-1066.2
NC_006274:5122500:513844951384495139078630Bacillus cereus E33L, complete genometranscriptional regulator, TetR family1e-1066.2
NC_014335:5005267:502171150217115022340630Bacillus cereus biovar anthracis str. CI chromosome, completeTetR family transcriptional regulator1e-1066.2
NC_004722:5194000:524727152472715247900630Bacillus cereus ATCC 14579, complete genomeTranscriptional regulator, TetR family1e-1066.2
NC_008600:5046000:509679450967945097432639Bacillus thuringiensis str. Al Hakam, complete genometranscriptional regulator, TetR family1e-1066.2
NC_011773:5091609:512804351280435128672630Bacillus cereus AH820 chromosome, complete genomeTetR family transcriptional regulator1e-1066.2
NC_007530:5033095:506830150683015068903603Bacillus anthracis str. 'Ames Ancestor', complete genometranscriptional regulator, tetr family1e-1066.2
NC_003997:5032969:506817550681755068777603Bacillus anthracis str. Ames, complete genometranscriptional regulator, TetR family1e-1066.2
NC_016779:5009320:506248950624895063118630Bacillus cereus F837/76 chromosome, complete genomeTetR family transcriptional regulator1e-1066.2
NC_014171:5107956:515937151593715160000630Bacillus thuringiensis BMB171 chromosome, complete genomeTetR family transcriptional regulator1e-1066.2
NC_012659:5031827:506820150682015068830630Bacillus anthracis str. A0248, complete genomeTetR family transcriptional regulator1e-1066.2
NC_012581:5052000:507083350708335071462630Bacillus anthracis str. CDC 684 chromosome, complete genomeTetR family transcriptional regulator1e-1066.2
NC_009674:3903893:391946239194623920091630Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeTetR family transcriptional regulator2e-1065.9
NC_005957:5037499:507420550742055074834630Bacillus thuringiensis serovar konkukian str. 97-27, completetranscriptional regulator, TetR family2e-1065.9
NC_003909:4996783:504757850475785048207630Bacillus cereus ATCC 10987, complete genometranscriptional regulator, TetR family4e-1064.7
NC_017200:5149528:518703751870375187666630Bacillus thuringiensis serovar finitimus YBT-020 chromosome,TetR family transcriptional regulator4e-1064.7
NC_004193:701622:715262715262715828567Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator4e-1064.7
NC_016771:5038435:505447550544755055077603Bacillus cereus NC7401, complete genomeTetR family transcriptional regulator5e-1064.3
NC_011969:4993386:504630450463045046933630Bacillus cereus Q1 chromosome, complete genomeTetR family transcriptional regulator5e-1064.3
NC_011658:5087887:510215251021525102781630Bacillus cereus AH187 chromosome, complete genomeTetR family transcriptional regulator5e-1064.3
NC_006361:498305:504157504157504795639Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator7e-1063.9
NC_010611:3413333:341784934178493418448600Acinetobacter baumannii ACICU, complete genomeTranscriptional regulator2e-0962.4
NC_010410:480518:495244495244495891648Acinetobacter baumannii AYE, complete genomeputative transcriptional regulator (TetR family)2e-0962.4
NC_010612:6113155:612666161266616127263603Mycobacterium marinum M, complete genometranscriptional regulatory protein (probably TetR-family)3e-0962
NC_014831:1818968:182454118245411825230690Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, TetR family3e-0961.6
NC_019673:1988853:199991619999162000491576Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, TetR family4e-0961.2
NC_015160:1055220:105522010552201055807588Odoribacter splanchnicus DSM 20712 chromosome, complete genometranscriptional regulator, TetR family5e-0960.8
NC_008699:2916752:293651429365142937146633Nocardioides sp. JS614, complete genomeregulatory protein, TetR6e-0960.8
NC_017955:3670670:370022737002273700955729Modestobacter marinus, complete genomeHTH-type transcriptional regulator1e-0859.7
NC_002570:3911153:391820939182093918817609Bacillus halodurans C-125, complete genometranscriptional regulator (TetR/AcrR family)1e-0859.7
NC_010382:1020516:102975210297521030384633Lysinibacillus sphaericus C3-41, complete genomeTetR family transcriptional regulator2e-0858.9
NC_014830:3438504:347522834752283475842615Intrasporangium calvum DSM 43043 chromosome, complete genometranscriptional regulator, TetR family4e-0858.2
NC_008699:833737:853126853126853728603Nocardioides sp. JS614, complete genomeregulatory protein, TetR4e-0858.2
NC_016023:1083826:110000311000031100566564Bacillus coagulans 36D1 chromosome, complete genomeTetR family transcriptional regulator6e-0857.4
NC_013385:1064188:107194410719441072534591Ammonifex degensii KC4, complete genometranscriptional regulator, TetR family7e-0857
NC_020133:5710661:572194157219415722498558Mycobacterium liflandii 128FXT, complete genomeTetR family transcriptional regulator8e-0857
NC_009077:4810379:482799648279964828661666Mycobacterium sp. JLS, complete genometranscriptional regulator, TetR family1e-0756.6
NC_010814:155834:180041180041180643603Geobacter lovleyi SZ, complete genometranscriptional regulator, TetR family1e-0756.6
NC_016023:1538000:154173415417341542369636Bacillus coagulans 36D1 chromosome, complete genomeTetR family transcriptional regulator2e-0755.5
NC_008146:2744612:276880427688042769427624Mycobacterium sp. MCS, complete genometranscriptional regulator, TetR family2e-0755.5
NC_008705:2763131:278669227866922787315624Mycobacterium sp. KMS, complete genometranscriptional regulator, TetR family2e-0755.5
NC_009253:3317533:332094233209423321559618Desulfotomaculum reducens MI-1 chromosome, complete genomeTetR family transcriptional regulator2e-0755.5
NC_015172:2986867:302742730274273028068642Syntrophobotulus glycolicus DSM 8271 chromosome, complete genometranscriptional regulator, TetR family3e-0755.1
NC_013406:5066769:508499650849965085649654Paenibacillus sp. Y412MC10 chromosome, complete genomeTetR family transcriptional regulator3e-0754.7
NC_010723:622928:622928622928623533606Clostridium botulinum E3 str. Alaska E43, complete genomeTetR-family transcriptional regulator4e-0754.7
NC_013385:1007616:100995610099561010600645Ammonifex degensii KC4, complete genometranscriptional regulator, TetR family5e-0754.3
NC_016147:1788219:180650518065051807080576Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeTetR family transcriptional regulator5e-0754.3
NC_015563:2656628:268139926813992682013615Delftia sp. Cs1-4 chromosome, complete genomeregulatory protein TetR7e-0753.9
NC_009725:692237:692237692237693085849Bacillus amyloliquefaciens FZB42, complete genomeYerO8e-0753.5
NC_020272:3245834:326538932653893266237849Bacillus amyloliquefaciens IT-45, complete genomeHTH-type transcriptional regulator YerO8e-0753.5
NC_014551:691594:691594691594692448855Bacillus amyloliquefaciens DSM 7, complete genometranscriptional regulator (TetR/AcrR family)8e-0753.5
NC_011000:1262324:129188312918831292545663Burkholderia cenocepacia J2315 chromosome 1, complete sequenceTetR family regulatory protein8e-0753.5
NC_011832:820658:883580883580884251672Candidatus Methanosphaerula palustris E1-9c, complete genometranscriptional regulator, TetR family1e-0652.8
NC_015953:3159234:316659831665983167191594Streptomyces sp. SirexAA-E chromosome, complete genomeTetR family transcriptional regulator2e-0652.8
NC_018524:1279156:129739812973981297970573Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeputative transcriptional regulator2e-0652.4
NC_009633:337706:353145353145353717573Alkaliphilus metalliredigens QYMF chromosome, complete genomeTetR family transcriptional regulator2e-0652.4
NC_018681:3541484:356185235618523562475624Nocardia brasiliensis ATCC 700358 chromosome, complete genomeputative transcriptional regulator, TetR family protein2e-0652.4
NC_015589:3852217:386542538654253865997573Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeregulatory protein TetR2e-0652.4
NC_008570:3220539:327467032746703275311642Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeTetR family regulatory protein2e-0652
NC_010676:2720068:271940327194032720071669Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, TetR family3e-0652
NC_002570:1041342:106282010628201063431612Bacillus halodurans C-125, complete genometranscriptional regulator (TetR/AcrR family)3e-0652
NC_017904:2724941:272761627276162728188573Mycobacterium sp. MOTT36Y chromosome, complete genomeTetR family transcriptional regulator3e-0652
NC_016947:2380500:240160224016022402195594Mycobacterium intracellulare MOTT-02 chromosome, complete genomeTetR family transcriptional regulator4e-0651.6
NC_014915:3320768:336686733668673367790924Geobacillus sp. Y412MC52 chromosome, complete genomeregulatory protein TetR3e-0651.6
NC_016830:3869572:394187439418743942548675Pseudomonas fluorescens F113 chromosome, complete genomeTetR family transcriptional regulator3e-0651.6
NC_014387:3227875:323418632341863234752567Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeTetR family transcriptional regulator5e-0650.8
NC_015224:1641819:164285416428541643564711Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative DNA-binding transcriptional regulator8e-0650.4
NC_015594:160848:165046165046165639594Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeregulatory protein TetR8e-0650.4
NC_013799:1117750:112189411218941122469576Hydrogenobacter thermophilus TK-6, complete genometranscriptional regulator, TetR family6e-0650.4
NC_017161:1117741:112188511218851122460576Hydrogenobacter thermophilus TK-6 chromosome, complete genomeTetR family transcriptional regulator6e-0650.4
NC_008268:3162824:3181094318109431822901197Rhodococcus sp. RHA1, complete genomeprobable transcriptional regulator8e-0650.1
NC_015580:1328361:132836113283611329092732Novosphingobium sp. PP1Y, complete genomeTetR family transcriptional regulator1e-0550.1
NC_015690:2039215:206876320687632069362600Paenibacillus mucilaginosus KNP414 chromosome, complete genomeTetR family transcriptional regulator1e-0550.1
NC_013715:193647:206119206119206739621Rothia mucilaginosa DY-18, complete genometranscriptional regulator1e-0550.1
NC_007761:3564449:358390635839063584508603Rhizobium etli CFN 42, complete genomeprobable transcriptional regulator protein, TetR family1e-0550.1