Pre_GI: BLASTP Hits

Some Help

Query: NC_006177:1060428:1065806 Symbiobacterium thermophilum IAM 14863, complete genome

Start: 1065806, End: 1067734, Length: 1929

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014376:6296:90379037109561920Clostridium saccharolyticum WM1 chromosome, complete genometranscriptional antiterminator, BglG1e-78294
NC_016641:2291363:2303197230319723051041908Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional antiterminator BglG3e-62240
NC_016641:373623:3840913840913860821992Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional antiterminator3e-50200
NC_014377:532816:5554125554125573791968Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional antiterminator, BglG7e-42172
NC_014376:1586649:1606810160681016087291920Clostridium saccharolyticum WM1 chromosome, complete genometranscriptional antiterminator, BglG1e-39165
NC_014650:1410790:1421157142115714230731917Geobacillus sp. Y4.1MC1 chromosome, complete genometranscriptional antiterminator BglG2e-38161
NC_016023:729843:7367687367687386871920Bacillus coagulans 36D1 chromosome, complete genomePTS modulated transcriptional regulator, MtlR family5e-32139
NC_015634:526889:5354975354975374161920Bacillus coagulans 2-6 chromosome, complete genomePTS modulated transcriptional regulator, MtlR family5e-31136
NC_015389:1977736:1981635198163519836231989Coriobacterium glomerans PW2 chromosome, complete genometranscriptional antiterminator, BglG4e-29130
NC_020244:1264500:1273750127375012756961947Bacillus subtilis XF-1, complete genometranscriptional regulator2e-28128
NC_014976:3469395:3483227348322734851731947Bacillus subtilis BSn5 chromosome, complete genometranscriptional antiterminator4e-28127
NC_013768:418000:4384014384014403351935Listeria monocytogenes 08-5923, complete genomehypothetical protein8e-28125
NC_013766:417991:4383804383804403141935Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein8e-28125
NC_003210:403743:4241304241304260641935Listeria monocytogenes EGD-e, complete genomehypothetical protein1e-27125
NC_017195:1230485:1247625124762512495711947Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeHTH domain family2e-27124
NC_011660:2175537:2196185219618521981221938Listeria monocytogenes HCC23 chromosome, complete genomePRD/PTS system IIA 2 domain protein3e-25117
NC_012472:5015621:5029907502990750318531947Bacillus cereus 03BB102, complete genometranscriptional regulator5e-24113
NC_009725:2517428:2538466253846625404181953Bacillus amyloliquefaciens FZB42, complete genomeManR8e-24112
NC_020995:789665:8061888061888081221935Enterococcus casseliflavus EC20, complete genomehypothetical protein1e-23112
NC_016779:4969626:4983899498389949858451947Bacillus cereus F837/76 chromosome, complete genomeBglG family transcriptional antiterminator3e-23110
NC_020272:1384525:1384525138452513864771953Bacillus amyloliquefaciens IT-45, complete genomeputative licABCH operon regulator2e-22108
NC_019842:2575000:2592489259248925944411953Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,licABCH operon regulator2e-22108
NC_008600:5005345:5019631501963150215861956Bacillus thuringiensis str. Al Hakam, complete genometranscriptional regulator5e-22106
NC_011969:4945441:4961027496102749629731947Bacillus cereus Q1 chromosome, complete genomemanr1e-21105
NC_016511:15100:2629126291277061416Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeHTH domain protein1e-1999
NC_013199:392450:4026624026624045301869Lactobacillus rhamnosus Lc 705, complete genomepredicted ORF1e-1998.6
NC_016516:15102:2581725817277091893Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeHTH domain protein2e-1997.8
NC_013956:2592378:2594311259431125962181908Pantoea ananatis LMG 20103 chromosome, complete genomeLicR5e-1996.7
NC_017188:2512357:2529314252931425312661953Bacillus amyloliquefaciens TA208 chromosome, complete genometranscriptional antiterminator5e-1996.7
NC_017191:2514401:2531358253135825333101953Bacillus amyloliquefaciens XH7 chromosome, complete genomemannose operon transcriptional antiterminator5e-1996.7
NC_016512:15102:2581725817277091893Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeHTH domain protein2e-1894.4
NC_017316:2710021:2711057271105727129191863Enterococcus faecalis OG1RF chromosome, complete genomeputative transcriptional activator SrlM2e-1687.8
NC_004668:3184319:3189426318942631912881863Enterococcus faecalis V583, complete genomeputative transcriptional activator SrlM8e-1685.9
NC_014377:1985714:1997875199787519999622088Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional antiterminator, BglG family1e-1482
NC_011899:2165814:2173706217370621759312226Halothermothrix orenii H 168, complete genometranscriptional antiterminator, BglG2e-1481.6
NC_015391:2449927:2454436245443624563641929Carnobacterium sp. 17-4 chromosome, complete genomelicABCH operon regulator2e-1481.3
NC_014831:1843835:1874104187410418760741971Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional antiterminator, BglG4e-1377
NC_017341:2303005:2304578230457823067102133Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,transcriptional antiterminator, BglG family/DNA-binding protein2e-1274.7
NC_002951:2208813:2210386221038622125182133Staphylococcus aureus subsp. aureus COL, complete genometranscriptional antiterminator, BglG family/DNA-binding protein2e-1274.7
NC_017179:2513804:2534847253484725369762130Clostridium difficile BI1, complete genomeputative transcription antiterminator4e-1067
NC_013315:2505792:2526835252683525289732139Clostridium difficile CD196 chromosome, complete genometranscription antiterminator5e-1067
NC_013316:2585666:2607391260739126095292139Clostridium difficile R20291, complete genomeputative transcription antiterminator5e-1067
NC_006510:2044347:2064172206417220662262055Geobacillus kaustophilus HTA426, complete genomehypothetical protein9e-1065.9
NC_021171:4588792:4633997463399746361052109Bacillus sp. 1NLA3E, complete genomeputative transcriptional regulator2e-0964.7
NC_016012:665171:6812096812096832362028Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeputative PRD domain-containing protein3e-0964.3
NC_010498:4072681:4075489407548940770421554Escherichia coli SMS-3-5, complete genomeputative PTS regulatory protein4e-0757
NC_008253:3941938:3941938394193839434911554Escherichia coli 536, complete genomeputative transcriptional antiterminator6e-0756.6
NC_013411:2975364:2987715298771529898592145Geobacillus sp. Y412MC61, complete genomePTS modulated transcriptional regulator, MtlR family1e-0655.5
NC_014915:2092678:2127646212764621297902145Geobacillus sp. Y412MC52 chromosome, complete genometranscriptional antiterminator, BglG1e-0655.5
NC_011601:4096427:4096427409642740979801554Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometranscriptional antiterminator2e-0655.1
NC_008261:64678:777267772678574849Clostridium perfringens ATCC 13124, complete genometranscription antiterminator2e-0654.7
NC_020181:969599:978102978102978566465Enterobacter aerogenes EA1509E, complete genomePTS system, fructose-specific IIA component3e-0654.3
NC_009617:263060:2782072782072802582052Clostridium beijerinckii NCIMB 8052 chromosome, complete genometranscriptional antiterminator BglG4e-0653.9
NC_010723:3395187:342819634281963429050855Clostridium botulinum E3 str. Alaska E43, complete genometranscription antiterminator LicT6e-0653.1
NC_003210:2721559:2723786272378627258522067Listeria monocytogenes EGD-e, complete genomehypothetical protein1e-0552.4