Pre_GI: BLASTP Hits

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Query: NC_005140:883857:902486 Vibrio vulnificus YJ016 chromosome II, complete sequence

Start: 902486, End: 903913, Length: 1428

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014966:919442:9328219328219343051485Vibrio vulnificus MO6-24/O chromosome II, complete sequencesignal transduction histidine kinase0984
NC_013457:140474:1435711435711450251455Vibrio sp. Ex25 chromosome 2, complete genomesignal transduction histidine kinase0763
NC_016628:193000:1962961962961977711476Vibrio furnissii NCTC 11218 chromosome 2, complete sequencesensor histidine kinase0735
NC_012667:839318:8624008624008638991500Vibrio cholerae MJ-1236 chromosome 2, complete genomesignal transduction histidine kinase0716
NC_012583:683887:7066087066087081071500Vibrio cholerae O395 chromosome chromosome II, complete sequencesensor histidine kinase0716
NC_005957:4850659:4850659485065948521671509Bacillus thuringiensis serovar konkukian str. 97-27, completesensory transduction protein3e-1067
NC_016610:1310275:1332960133296013352782319Tannerella forsythia ATCC 43037 chromosome, complete genomeATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein1e-0862
NC_013757:1544348:1573944157394415758481905Geodermatophilus obscurus DSM 43160, complete genomemulti-sensor signal transduction histidine kinase2e-0861.2
NC_013730:1074393:1095802109580210972471446Spirosoma linguale DSM 74, complete genomehistidine kinase2e-0860.8
NC_009832:4482500:4494141449414144957841644Serratia proteamaculans 568, complete genomehistidine kinase4e-0859.7
NC_015164:1877981:1886675188667518880631389Bacteroides salanitronis DSM 18170 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase6e-0859.3
NC_005071:866468:8811218811218824431323Prochlorococcus marinus str. MIT 9313, complete genometwo-component sensor histidine kinase7e-0858.9
NC_013169:474856:4883334883334895021170Kytococcus sedentarius DSM 20547, complete genomesignal transduction histidine kinase7e-0858.9
NC_011206:2685499:2721519272151927227931275Acidithiobacillus ferrooxidans ATCC 53993, complete genomeintegral membrane sensor signal transduction histidine kinase9e-0858.5
NC_011761:2785660:2821701282170128229541254Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completesensor histidine kinase9e-0858.5
NC_012587:3177583:3181521318152131827681248Rhizobium sp. NGR234, complete genomesensor protein1e-0758.5
NC_008820:1197898:1199688119968812010221335Prochlorococcus marinus str. MIT 9303, complete genometwo-component sensor histidine kinase2e-0758.2
NC_007952:1416000:1435009143500914364091401Burkholderia xenovorans LB400 chromosome 2, complete sequenceHeavy metal sensor signal transduction histidine kinases (STHK)1e-0758.2
NC_015177:1859879:1861016186101618627761761Pedobacter saltans DSM 12145 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase2e-0757.8
NC_007761:57199:5719957199585271329Rhizobium etli CFN 42, complete genometwo-component sensor histidine kinase protein2e-0757.8
NC_000911:2511514:2518321251832125218573537Synechocystis sp. PCC 6803, complete genomehybrid sensory kinase2e-0757.8
NC_012803:1980955:1984872198487219860411170Micrococcus luteus NCTC 2665, complete genomesignal transduction histidine kinase2e-0757.4
NC_015164:2935363:2956174295617429584922319Bacteroides salanitronis DSM 18170 chromosome, complete genomeintegral membrane sensor hybrid histidine kinase2e-0757.4
NC_015376:3249773:3267309326730932684361128Burkholderia gladioli BSR3 chromosome chromosome 2, completeResponse regulator receiver sensor signal transduction histidine kinase3e-0757.4
NC_016002:2946702:2958450295845029597781329Pseudogulbenkiania sp. NH8B, complete genomesensor histidine kinase3e-0757
NC_012969:2476318:2499150249915025004961347Methylovorus glucosetrophus SIP3-4 chromosome, complete genomehistidine kinase3e-0757
NC_009675:3067567:3087792308779230907312940Anaeromyxobacter sp. Fw109-5 chromosome, complete genomemulti-sensor signal transduction histidine kinase3e-0757
NC_010001:232976:2429192429192440521134Clostridium phytofermentans ISDg, complete genomeintegral membrane sensor signal transduction histidine kinase4e-0756.6
NC_007510:2284000:2303497230349723048581362Burkholderia sp. 383 chromosome 1, complete sequenceperiplasmic sensor signal transduction histidine kinase4e-0756.6
NC_010994:57362:5736257362586721311Rhizobium etli CIAT 652, complete genometwo-component sensor histidine kinase protein4e-0756.6
NC_008150:2451872:2451872245187224532211350Yersinia pestis Antiqua, complete genomeputative two-component system sensor kinase6e-0756.2
NC_005810:2905362:2905362290536229067111350Yersinia pestis biovar Microtus str. 91001, complete genomeputative two-component system sensor kinase6e-0756.2
NC_003143:3346834:3346834334683433481831350Yersinia pestis CO92, complete genomeputative two-component system sensor kinase6e-0756.2
NC_014029:3401238:3401238340123834025871350Yersinia pestis Z176003 chromosome, complete genomeputative two-component system sensor kinase6e-0756.2
NC_017154:3344273:3344273334427333456221350Yersinia pestis D106004 chromosome, complete genomeputative two-component system sensor kinase6e-0756.2
NC_017160:3326199:3326199332619933275481350Yersinia pestis D182038 chromosome, complete genomeputative two-component system sensor kinase6e-0756.2
NC_011757:1067543:1082976108297610843101335Methylobacterium chloromethanicum CM4, complete genomehistidine kinase6e-0756.2
NC_012811:139498:1549681549681563021335Methylobacterium extorquens AM1 megaplasmid, complete sequencePeriplasmic sensor signal transduction histidine kinase6e-0756.2
NC_009792:4017510:4039164403916440423463183Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-0756.2
NC_011985:61003:6166661666630031338Agrobacterium radiobacter K84 chromosome 1, complete genometwo-component sensor histidine kinase protein4e-0756.2
NC_017986:3283433:3285429328542932867571329Pseudomonas putida ND6 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase8e-0755.8
NC_004663:2246756:2258318225831822603752058Bacteroides thetaiotaomicron VPI-5482, complete genometwo-component system sensor histidine kinase1e-0655.5
NC_014171:261952:2702572702572714771221Bacillus thuringiensis BMB171 chromosome, complete genometwo component system histidine kinase1e-0655.1
NC_009706:3882500:390170939017093902632924Clostridium kluyveri DSM 555 chromosome, complete genomesensory transduction kinase1e-0655.1
NC_011837:3814000:383321238332123834135924Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-0655.1
NC_008609:3672653:3700534370053437019761443Pelobacter propionicus DSM 2379, complete genomeintegral membrane sensor signal transduction histidine kinase1e-0654.7
NC_015183:51500:5275152751540821332Agrobacterium sp. H13-3 chromosome, complete genometwo component sensor kinase2e-0654.3
NC_018515:3108755:3114394311439431158001407Desulfosporosinus meridiei DSM 13257 chromosome, complete genomesignal transduction histidine kinase2e-0654.3
NC_008340:2034810:2060677206067720620471371Alkalilimnicola ehrlichei MLHE-1, complete genomeGAF sensor signal transduction histidine kinase3e-0653.9
NC_012559:854507:8569978569978591652169Laribacter hongkongensis HLHK9, complete genomeSensor protein3e-0653.9
NC_004193:375416:6112396112396126211383Oceanobacillus iheyensis HTE831, complete genometwo-component sensor histidine kinase2e-0653.9
NC_013892:4129500:4131105413110541324751371Xenorhabdus bovienii SS-2004 chromosome, complete genomesensory histidine kinase in two-component regulatory system with CpxR, regulates genes involved in folding/degrading periplasmic proteins, senses chan2e-0653.9
NC_015589:1468774:1471516147151614729101395Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeATP-binding region ATPase domain-containing protein2e-0653.9
NC_007508:237771:2714342714342728761443Xanthomonas campestris pv. vesicatoria str. 85-10, complete genometwo-component system sensor histidine kinase2e-0653.9
NC_017208:256163:2694592694592707541296Bacillus thuringiensis serovar chinensis CT-43 chromosome, completetwo component system histidine kinase2e-0653.9
NC_016894:2809125:2826805282680528285561752Acetobacterium woodii DSM 1030 chromosome, complete genomephosphate regulon sensor protein PhoR23e-0653.5
NC_013730:906389:9193319193319208091479Spirosoma linguale DSM 74, complete genomesignal transduction histidine kinase, nitrogen specific, NtrB4e-0653.1
NC_014483:4532000:4533933453393345350361104Paenibacillus polymyxa E681 chromosome, complete genomeSignal transduction histidine kinase5e-0652.8
NC_016751:1776669:1797459179745917986881230Marinitoga piezophila KA3 chromosome, complete genomehistidine kinase6e-0652.4
NC_016609:6177651:6174535617453561776543120Niastella koreensis GR20-10 chromosome, complete genomehistidine kinase8e-0652.4
NC_014364:2246524:2271687227168722727571071Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase9e-0652
NC_008254:3143770:3162985316298531644511467Mesorhizobium sp. BNC1, complete genomeperiplasmic sensor signal transduction histidine kinase9e-0652