Pre_GI Gene

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Host: NC_010001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:232976 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2329762341541179amidohydrolaseQuickGO ontologyBLASTP
234483234971489CMPdCMP deaminase zinc-bindingQuickGO ontologyBLASTP
2351862366161431beta-lactamaseQuickGO ontologyBLASTP
2366172381551539glycoside hydrolase family 43QuickGO ontologyBLASTP
2382982400911794ABC transporter relatedQuickGO ontologyBLASTP
2400942420371944ABC transporter relatedQuickGO ontologyBLASTP
242049242735687hypothetical protein
2429192440521134integral membrane sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
244049244729681two component transcriptional regulator winged helix familyQuickGO ontologyBLASTP
244835245491657hypothetical protein
2456082464748674Fe-4S ferredoxin iron-sulfur binding domain proteinQuickGO ontologyBLASTP
246458246991534alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergenQuickGO ontologyBLASTP
2471332486171485L-fucose isomerase related proteinQuickGO ontologyBLASTP
2491132513232211methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
251342252022681MgtCSapB transporterQuickGO ontologyBLASTP
2521992533261128glycosyl hydrolase family 88QuickGO ontologyBLASTP
2536762547161041peptidylprolyl isomerase FKBP-typeQuickGO ontologyBLASTP