Pre_GI: BLASTP Hits

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Query: NC_005126:3485330:3491932 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 3491932, End: 3492717, Length: 786

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012962:1827000:183845918384591839256798Photorhabdus asymbiotica, complete genomecobalt-precorrin-6a reductase3e-136484
NC_013892:853366:860330860330861124795Xenorhabdus bovienii SS-2004 chromosome, complete genomecobalt-precorrin-6A reductase8e-84310
NC_011094:2061000:208474020847402085531792Salmonella enterica subsp. enterica serovar Schwarzengrund strcobalt-precorrin-6x reductase4e-75281
NC_011149:2040396:206305220630522063843792Salmonella enterica subsp. enterica serovar Agona str. SL483,precorrin-6x reductase1e-74279
NC_013316:3863728:388042738804273881179753Clostridium difficile R20291, complete genomecobalt-precorrin-6a reductase9e-47187
NC_009089:3998347:401502340150234015775753Clostridium difficile 630, complete genomecobalt-precorrin-6a reductase9e-47187
NC_019903:1058657:106854310685431069343801Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,cobalt-precorrin 6A reductase2e-36152
NC_015690:7518732:752189675218967522681786Paenibacillus mucilaginosus KNP414 chromosome, complete genomeprecorrin-6x reductase5e-34144
NC_015519:488550:494022494022494777756Tepidanaerobacter sp. Re1 chromosome, complete genomeprecorrin-6x reductase1e-32140
NC_010382:3350816:336559233655923366344753Lysinibacillus sphaericus C3-41, complete genomecobalt-precorrin-6A reductase2e-32139
NC_016641:1085862:109792510979251098689765Paenibacillus terrae HPL-003 chromosome, complete genomeprecorrin-6x reductase2e-32139
NC_021171:415771:421489421489422262774Bacillus sp. 1NLA3E, complete genomeprecorrin-6x reductase1e-31136
NC_012491:1263469:127360112736011274374774Brevibacillus brevis NBRC 100599, complete genomeprecorrin-6x reductase9e-31134
NC_011898:1558208:1579636157963615808591224Clostridium cellulolyticum H10, complete genomeprecorrin-6x reductase3e-30132
NC_016791:1132451:1142910114291011441271218Clostridium sp. BNL1100 chromosome, complete genomeprecorrin-6x reductase6e-30130
NC_015573:1979202:198286719828671983685819Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeprecorrin-6x reductase1e-28126
NC_014483:4957315:497075449707544971533780Paenibacillus polymyxa E681 chromosome, complete genomeprecorrin-6x reductase2e-28126
NC_016627:4203775:4218278421827842195071230Clostridium clariflavum DSM 19732 chromosome, complete genomeprecorrin-6x reductase5e-28124
NC_014622:5315500:532903653290365329815780Paenibacillus polymyxa SC2 chromosome, complete genomeprecorrin-6x reductase6e-28124
NC_009253:2927802:293555429355542936315762Desulfotomaculum reducens MI-1 chromosome, complete genomeprecorrin-6x reductase2e-27123
NC_004557:749330:764990764990765760771Clostridium tetani E88, complete genomeprecorrin-6x reductase5e-27121
NC_010001:1702350:1719119171911917210861968Clostridium phytofermentans ISDg, complete genomeprecorrin-6x reductase4e-27121
NC_009633:74500:973169731698092777Alkaliphilus metalliredigens QYMF chromosome, complete genomeprecorrin-6x reductase1e-25117
NC_014633:442755:473679473679474419741Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceprecorrin-6x reductase1e-25116
NC_008593:2250871:225505422550542255833780Clostridium novyi NT, complete genomeprecorrin-6x reductase2e-25116
NC_015565:624298:638128638128638889762Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeprecorrin-6x reductase9e-25114
NC_014734:3086165:310121331012133101953741Paludibacter propionicigenes WB4 chromosome, complete genomeprecorriN-6x reductase8e-25114
NC_013517:1055854:111316111131611113913753Sebaldella termitidis ATCC 33386, complete genomeprecorrin-6x reductase1e-24113
NC_021182:1245692:126257812625781263351774Clostridium pasteurianum BC1, complete genomeprecorrin-6x reductase7e-24110
NC_011059:1391734:140492614049261405699774Prosthecochloris aestuarii DSM 271, complete genomePrecorrin-6x reductase CbiJ/CobK9e-24110
NC_000909:467607:487940487940488689750Methanocaldococcus jannaschii DSM 2661, complete genomecobalamin biosynthesis protein (cbiJ)5e-23108
NC_013192:232778:269942269942270742801Leptotrichia buccalis DSM 1135, complete genomeprecorrin-6x reductase4e-23108
NC_014328:3482980:348524534852453486021777Clostridium ljungdahlii ATCC 49587 chromosome, complete genomecobalt-precorrin-6A reductase3e-23108
NC_009617:1487110:149234714923471493120774Clostridium beijerinckii NCIMB 8052 chromosome, complete genomecobalt-precorrin-6x reductase4e-21101
NC_013156:728397:750445750445751176732Methanocaldococcus fervens AG86, complete genomeprecorrin-6x reductase1e-20100
NC_009515:853932:857814857814858608795Methanobrevibacter smithii ATCC 35061, complete genomeprecorrin-6X reductase, CbiJ3e-1892.4
NC_017295:1507956:152363115236311524419789Clostridium acetobutylicum EA 2018 chromosome, complete genomecobalt-precorrin-6x reductase2e-1685.9
NC_003030:1510000:152421715242171525005789Clostridium acetobutylicum ATCC 824, complete genomeprecorrin-6x reductase2e-1685.9
NC_015687:1508664:152581815258181526606789Clostridium acetobutylicum DSM 1731 chromosome, complete genomecobalt-precorrin-6x reductase2e-1685.9
NC_011026:2624775:264795126479512648730780Chloroherpeton thalassium ATCC 35110, complete genomeprecorrin-6x reductase5e-1581.6
NC_015065:232240:245702245702246478777Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequenceprecorrin-6x reductase2e-1376.3
NC_016516:463460:466695466695467447753Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeprecorrin-6x reductase CbiJ/CobK3e-1272.8
NC_016511:472666:475898475898476650753Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeprecorrin-6x reductase CbiJ/CobK3e-1272.8
NC_014039:499233:502462502462503214753Propionibacterium acnes SK137 chromosome, complete genomeprecorrin-6x reductase CbiJ/CobK3e-1272.8
NC_006085:481231:4844604844604855001041Propionibacterium acnes KPA171202, complete genomeprecorrin-6x reductase3e-1272.4
NC_016631:2112175:211136921113692112178810Granulicella mallensis MP5ACTX8 chromosome, complete genomeprecorrin-6x reductase9e-1270.9
NC_010511:2703684:270593727059372706698762Methylobacterium sp. 4-46 chromosome, complete genomeprecorrin-6x reductase5e-0961.6
NC_016776:2956444:2958246295824629601741929Bacteroides fragilis 638R, complete genomeputative bifunctional CbiD/CbiJ cobalamin biosynthesis protein1e-0860.5
NC_006347:2899653:2899653289965329015811929Bacteroides fragilis YCH46, complete genomeprecorrin-6X reductase CbiD1e-0860.5
NC_003228:2973266:2973266297326629751941929Bacteroides fragilis NCTC 9343, complete genomeputative bifunctional CbiD/CbiJ cobalamin biosynthesis protein1e-0860.5
NC_021177:4258102:427109542710954271859765Streptomyces fulvissimus DSM 40593, complete genomeCobalt-precorrin-6x reductase2e-0859.7
NC_003888:3602753:362569536256953626462768Streptomyces coelicolor A3(2), complete genomeprecorrin-6x reductase5e-0858.2