Pre_GI Gene

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Host: NC_009515 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009515:853932 Methanobrevibacter smithii ATCC 35061, complete genome

Host Lineage: Methanobrevibacter smithii; Methanobrevibacter; Methanobacteriaceae; Methanobacteriales; Euryarchaeota; Archaea

General Information: Methanobrevibacter smithii ATCC 35061 (DSM 861) (strain PS) was isolated from a sewage digester in Gainesville, Florida, USA. Sewage digester isolate. Human gut methanogen. Methanobrevibacter smithii can be isolated from anoxic environments such as anaerobic digesters, anaerobic soil and sediment, and the gastrointestinal tracts of humans, ruminants and other animals. This organism is the dominant archaeal symbiont found in the human gut.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
853932854459528putative zinc-binding proteinQuickGO ontology
854449854886438acetyltransferaseQuickGO ontologyBLASTP
854963855349387hypothetical proteinBLASTP
8553618578172457cation transporter HAD ATPaseQuickGO ontologyBLASTP
857814858608795precorrin-6X reductase CbiJQuickGO ontologyBLASTP
85862085870283tRNA-SerQuickGO ontologyBLASTP
85875885884083tRNA-SerQuickGO ontologyBLASTP
85887985918730930S ribosomal protein S10PQuickGO ontologyBLASTP
8592588605381281elongation factor 1-alphaQuickGO ontologyBLASTP
8606518628432193elongation factor EF-2QuickGO ontologyBLASTP
86286886342856130S ribosomal protein S7PQuickGO ontologyBLASTP
86344286386742630S ribosomal protein S12PQuickGO ontologyBLASTP
8643818660361656methyl-coenzyme M reductase alpha subunit McrAQuickGO ontologyBLASTP
866026866832807methyl-coenzyme M reductase gamma subunit McrGQuickGO ontologyBLASTP
866847867353507methyl-coenzyme M reductase D subunit McrDQuickGO ontologyBLASTP
8673658686901326methyl-coenzyme M reductase beta subunit McrBQuickGO ontologyBLASTP
869655870086432transcription elongation factor NusA-like proteinQuickGO ontologyBLASTP
87009387039230050S ribosomal protein L30eQuickGO ontologyBLASTP
8704018716121212DNA-directed RNA polymerase subunit AQuickGO ontologyBLASTP
8716218743052685DNA-directed RNA polymerase subunit AQuickGO ontologyBLASTP
8743328761431812DNA-directed RNA polymerase subunit BQuickGO ontologyBLASTP