Pre_GI: BLASTP Hits

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Query: NC_005126:1265071:1299015 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 1299015, End: 1299914, Length: 900

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014228:4360676:437776743777674378651885Xenorhabdus nematophila ATCC 19061, complete genometransposase7e-148523
NC_011313:871445:886357886357887238882Aliivibrio salmonicida LFI1238 chromosome 2, complete sequencetransposase6e-103374
NC_014228:3353896:335389633538963354780885Xenorhabdus nematophila ATCC 19061, complete genometransposase1e-98359
NC_004347:1038253:104398710439871044865879Shewanella oneidensis MR-1, complete genometransposase, putative2e-96352
NC_019771:4922140:493501949350194935906888Anabaena cylindrica PCC 7122, complete genometransposase IS4 family protein4e-76285
NC_004757:2730057:273758027375802738458879Nitrosomonas europaea ATCC 19718, complete genomeTransposase IS4 family8e-74277
NC_015311:403281:429020429020429925906Prevotella denticola F0289 chromosome, complete genometransposase, IS4 family6e-71267
NC_010729:619664:642231642231643133903Porphyromonas gingivalis ATCC 33277, complete genometransposase in ISPg37e-70264
NC_010729:1179008:118597611859761186878903Porphyromonas gingivalis ATCC 33277, complete genometransposase in ISPg37e-70264
NC_010729:1179008:117900811790081179910903Porphyromonas gingivalis ATCC 33277, complete genometransposase in ISPg37e-70264
NC_010729:1179008:118466611846661185568903Porphyromonas gingivalis ATCC 33277, complete genometransposase in ISPg31e-69263
NC_015164:1158796:117926611792661180171906Bacteroides salanitronis DSM 18170 chromosome, complete genometransposase IS4 family protein2e-69263
NC_002950:209569:231068231068231970903Porphyromonas gingivalis W83, complete genomeISPg3, transposase7e-69260
NC_002950:1334500:133982213398221340724903Porphyromonas gingivalis W83, complete genomeISPg3, transposase2e-68259
NC_010729:1179008:118361011836101184512903Porphyromonas gingivalis ATCC 33277, complete genometransposase in ISPg33e-68258
NC_009615:3904962:393885039388503939755906Parabacteroides distasonis ATCC 8503 chromosome, complete genometransposase3e-68258
NC_015164:1158796:118038011803801181285906Bacteroides salanitronis DSM 18170 chromosome, complete genometransposase IS4 family protein4e-67254
NC_019904:4744744:476330447633044764200897Echinicola vietnamensis DSM 17526 chromosome, complete genometransposase family protein9e-65247
NC_010981:712843:7256257256257275511927Wolbachia pipientis, complete genome9e-59227
NC_008508:772038:790168790168791085918Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1,Transposase, ISLbp31e-58227
NC_010981:1111417:111422511142251115097873Wolbachia pipientis, complete genometransposase2e-58226
NC_010981:314745:362176362176363048873Wolbachia pipientis, complete genometransposase2e-58226
NC_010981:425387:430749430749431621873Wolbachia pipientis, complete genometransposase2e-58226
NC_010981:712843:726165726165727037873Wolbachia pipientis, complete genometransposase2e-58226
NC_010981:242500:246045246045246917873Wolbachia pipientis, complete genometransposase2e-58226
NC_008510:2877000:288091128809112881828918Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,Transposase, ISLbp39e-58223
NC_013892:1890500:197515019751501975629480Xenorhabdus bovienii SS-2004 chromosome, complete genometransposase4e-54211
NC_016610:2605922:262071826207182621380663Tannerella forsythia ATCC 43037 chromosome, complete genome8e-49194
NC_015571:1265121:127201012720101272477468Porphyromonas gingivalis TDC60, complete genometransposase in ISPg37e-38157
NC_018605:558391:561328561328561870543Cardinium endosymbiont cPer1 of Encarsia pergandiella, completeTransposase4e-35148
NC_012962:3933715:395444739544473954707261Photorhabdus asymbiotica, complete genomeTransposase2e-34145
NC_009488:89844:973339733398013681Orientia tsutsugamushi str. Boryong, complete genome4e-27122
NC_012962:3933715:395475139547513954948198Photorhabdus asymbiotica, complete genomeTransposase1e-21103
NC_008021:1634912:165077716507771651640864Streptococcus pyogenes MGAS9429, complete genometransposase5e-21102
NC_016593:2015321:201833920183392019217879Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein3e-1996.3
NC_012793:2122036:212203621220362122914879Geobacillus sp. WCH70, complete genometransposase IS4 family protein3e-1995.9
NC_006510:2910000:293402429340242934902879Geobacillus kaustophilus HTA426, complete genometransposase3e-1995.9
NC_013411:681907:690319690319691197879Geobacillus sp. Y412MC61, complete genometransposase IS4 family protein6e-1995.1
NC_014915:2900209:291136029113602912238879Geobacillus sp. Y412MC52 chromosome, complete genometransposase IS4 family protein6e-1995.1
NC_013411:597235:641533641533642411879Geobacillus sp. Y412MC61, complete genometransposase IS4 family protein6e-1995.1
NC_014915:595569:610826610826611704879Geobacillus sp. Y412MC52 chromosome, complete genometransposase IS4 family protein6e-1995.1
NC_013411:1454465:147088214708821471760879Geobacillus sp. Y412MC61, complete genometransposase IS4 family protein6e-1995.1
NC_014915:1880748:188257318825731883451879Geobacillus sp. Y412MC52 chromosome, complete genometransposase IS4 family protein6e-1994.7
NC_013411:2739989:274263527426352743513879Geobacillus sp. Y412MC61, complete genometransposase IS4 family protein6e-1994.7
NC_020210:901240:916353916353917231879Geobacillus sp. GHH01, complete genometransposase8e-1994.7
NC_020210:1275031:129724012972401298118879Geobacillus sp. GHH01, complete genometransposase8e-1994.4
NC_020210:788639:797319797319798197879Geobacillus sp. GHH01, complete genometransposase8e-1994.4
NC_006510:3321426:335462233546223355500879Geobacillus kaustophilus HTA426, complete genometransposase8e-1994.4
NC_006510:1731939:174842917484291749307879Geobacillus kaustophilus HTA426, complete genometransposase8e-1994.4
NC_016593:596500:626895626895627773879Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein8e-1994.4
NC_020210:1704500:175666017566601757538879Geobacillus sp. GHH01, complete genometransposase2e-1893.6
NC_016593:868500:875547875547876425879Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein2e-1893.6
NC_016593:2447938:245609624560962456974879Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein2e-1892.8
NC_013412:33834:394853948540363879Geobacillus sp. Y412MC61 plasmid pGYMC6101, complete sequencetransposase IS4 family protein7e-1891.3
NC_014916:22644:363693636937247879Geobacillus sp. Y412MC52 plasmid pGYMC5201, complete sequencetransposase IS4 family protein7e-1891.3
NC_015660:3174424:318761631876163188494879Geobacillus thermoglucosidasius C56-YS93 chromosome, completetransposase IS4 family protein1e-1790.5
NC_012891:1949882:195991719599171960780864Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,transposase3e-1789
NC_016593:868500:870339870339871217879Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein9e-1787.8
NC_019435:747162:752663752663753553891Lactococcus lactis subsp. cremoris UC509.9, complete genometransposase for insertion sequence element IS982B2e-1686.3
NC_012793:2122036:213556721355672136445879Geobacillus sp. WCH70, complete genometransposase IS4 family protein3e-1686.3
NC_012793:3275751:329430932943093295187879Geobacillus sp. WCH70, complete genometransposase IS4 family protein3e-1686.3
NC_009328:2161116:220606122060612206939879Geobacillus thermodenitrificans NG80-2 chromosome, complete genometransposase4e-1685.5
NC_014206:2516000:253159625315962532159564Geobacillus sp. C56-T3 chromosome, complete genometransposase IS4 family protein9e-1684.3
NC_008527:611836:616065616065616955891Lactococcus lactis subsp. cremoris SK11, complete genomeTransposase9e-1684.3
NC_020210:3341976:339091933909193391797879Geobacillus sp. GHH01, complete genometransposase8e-1684.3
NC_006510:1014500:103667910366791037557879Geobacillus kaustophilus HTA426, complete genometransposase8e-1684.3
NC_008527:611836:619712619712620602891Lactococcus lactis subsp. cremoris SK11, complete genomeTransposase2e-1583.2
NC_014393:92500:976289762898569942Clostridium cellulovorans 743B chromosome, complete genometransposase IS4 family protein2e-1583.2
NC_008527:740060:745561745561746451891Lactococcus lactis subsp. cremoris SK11, complete genomeTransposase2e-1583.2
NC_010793:1811401:184539718453971845678282Orientia tsutsugamushi str. Ikeda, complete genometransposase2e-1583.2
NC_014915:1080793:108550410855041086382879Geobacillus sp. Y412MC52 chromosome, complete genometransposase IS4 family protein2e-1583.2
NC_013411:1941762:194556019455601946438879Geobacillus sp. Y412MC61, complete genometransposase IS4 family protein2e-1583.2
NC_008505:36638:547435474355633891Lactococcus lactis subsp. cremoris SK11 plasmid 3, completeTransposase2e-1583.2
NC_014206:2516000:253233425323342533212879Geobacillus sp. C56-T3 chromosome, complete genometransposase IS4 family protein2e-1582.8
NC_004350:1252500:125267212526721253145474Streptococcus mutans UA159, complete genomeputative transposase7e-1581.3
NC_014393:3425694:344860534486053449546942Clostridium cellulovorans 743B chromosome, complete genometransposase IS4 family protein1e-1480.9
NC_014393:4541000:454598545459854546926942Clostridium cellulovorans 743B chromosome, complete genometransposase IS4 family protein1e-1480.9
NC_014393:92500:108993108993109934942Clostridium cellulovorans 743B chromosome, complete genometransposase IS4 family protein9e-1580.9
NC_015930:821342:841541841541842431891Lactococcus garvieae ATCC 49156, complete genometransposase2e-1479.7
NC_003272:3275413:328553632855363286429894Nostoc sp. PCC 7120, complete genometransposase3e-1479
NC_003272:3275413:327541332754133276306894Nostoc sp. PCC 7120, complete genometransposase4e-1479
NC_018528:65000:800008000080701702Lactobacillus helveticus R0052 chromosome, complete genometransposase8e-1477.8
NC_010793:541040:544569544569544877309Orientia tsutsugamushi str. Ikeda, complete genometransposase9e-1477.8
NC_009328:2161116:220083622008362201714879Geobacillus thermodenitrificans NG80-2 chromosome, complete genometransposase2e-1273.2
NC_013928:1828099:183171118317111832253543Streptococcus mutans NN2025, complete genometransposase3e-1272.8
NC_013504:1388480:140077614007761401633858Lactobacillus johnsonii FI9785 chromosome, complete genometransposase4e-1272.4
NC_010793:1811401:184078018407801841172393Orientia tsutsugamushi str. Ikeda, complete genometransposase3e-1169.7
NC_017028:109811:131289131289131480192Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completetransposase1e-1067.4
NC_017028:1131896:113170811317081131941234Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completetransposase-like protein2e-1067
NC_015722:4539:145011450114830330Candidatus Midichloria mitochondrii IricVA chromosome, completehypothetical protein7e-1064.7
NC_015722:462450:481901481901482233333Candidatus Midichloria mitochondrii IricVA chromosome, completeputative transposase7e-1064.7
NC_009488:1917000:191811119181111918287177Orientia tsutsugamushi str. Boryong, complete genome1e-0860.8
NC_005125:2269343:228210522821052282341237Gloeobacter violaceus PCC 7421, complete genomeputative transposase1e-0860.8
NC_010981:242500:247001247001247216216Wolbachia pipientis, complete genome3e-0859.3
NC_009488:803873:819444819444819641198Orientia tsutsugamushi str. Boryong, complete genome5e-0858.5
NC_009488:1465781:146997914699791470176198Orientia tsutsugamushi str. Boryong, complete genome5e-0858.5
NC_015311:365007:376278376278376481204Prevotella denticola F0289 chromosome, complete genome2e-0756.6
NC_015722:4539:308553085531409555Candidatus Midichloria mitochondrii IricVA chromosome, completeputative transposase3e-0755.8
NC_014727:1512546:152639115263911526858468Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,transposase1e-0654.3
NC_010830:1543548:156410715641071564931825Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein2e-0653.5
NC_017513:548882:557827557827558366540Neisseria meningitidis G2136 chromosome, complete genometransposase IS4 family2e-0653.5
NC_017513:618500:637770637770638309540Neisseria meningitidis G2136 chromosome, complete genometransposase IS4 family2e-0653.5
NC_017513:887344:898525898525899064540Neisseria meningitidis G2136 chromosome, complete genometransposase IS4 family2e-0653.5
NC_017513:997716:100476010047601005299540Neisseria meningitidis G2136 chromosome, complete genometransposase IS4 family2e-0653.5
NC_017513:997716:101901510190151019554540Neisseria meningitidis G2136 chromosome, complete genometransposase IS4 family2e-0653.5
NC_017515:1855114:186604018660401866579540Neisseria meningitidis M04-240196 chromosome, complete genometransposase IS4 family2e-0653.5
NC_017515:76861:847418474185280540Neisseria meningitidis M04-240196 chromosome, complete genometransposase IS4 family2e-0653.5
NC_010830:1362822:138215013821501382974825Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein2e-0653.1
NC_015161:1556766:156737415673741568024651Deinococcus proteolyticus MRP chromosome, complete genometransposase IS4 family protein2e-0653.1
NC_009488:1059147:107789310778931078135243Orientia tsutsugamushi str. Boryong, complete genome6e-0651.6