Pre_GI: BLASTP Hits

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Query: NC_004578:6334735:6362330 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 6362330, End: 6363979, Length: 1650

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:1738500:1758149175814917598251677Pseudomonas syringae pv. syringae B728a, complete genomeSulfatase0813
NC_004578:4432983:4436285443628544379281644Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein0808
NC_016830:1645879:1669263166926316709121650Pseudomonas fluorescens F113 chromosome, complete genometransmembrane sulfatase0776
NC_010322:29983:4060840608423051698Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein3e-127455
NC_002947:8394:2785027850295471698Pseudomonas putida KT2440, complete genomehypothetical protein3e-127455
NC_009512:27783:3982639826415231698Pseudomonas putida F1, complete genomeprotein of unknown function DUF17053e-127455
NC_010501:30000:4454244542462391698Pseudomonas putida W619, complete genomeprotein of unknown function DUF17053e-127455
NC_017986:2548720:2574030257403025757271698Pseudomonas putida ND6 chromosome, complete genomehypothetical protein1e-126454
NC_015733:5909821:5921913592191359234931581Pseudomonas putida S16 chromosome, complete genomehypothetical protein3e-124445
NC_009350:137645:1463011463011479231623Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completeputative sulfatase9e-117421
NC_010067:3247169:3270322327032232719651644Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-115417
NC_016818:2836851:2836851283685128384851635Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative membrane-associated, metal-dependent hydrolase3e-114412
NC_009350:137645:1446061446061462311626Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completeputative sulfatase2e-113409
NC_009659:1984980:1993155199315519946721518Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein4e-111402
NC_016147:623666:6403386403386420531716Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeinner membrane protein6e-111401
NC_013508:1289159:1325627132562713272521626Edwardsiella tarda EIB202, complete genomeputative sulfatase6e-111401
NC_010995:1101614:1103502110350211051601659Cellvibrio japonicus Ueda107, complete genomesulfatase1e-110400
NC_013361:1284579:1308571130857113101901620Escherichia coli O26:H11 str. 11368 chromosome, complete genomemembrane-associated metal-dependent hydrolase4e-109395
NC_013364:1257801:1280009128000912816281620Escherichia coli O111:H- str. 11128, complete genomeputative membrane-associated metal-dependent hydrolase4e-109395
NC_013008:1307392:1331860133186013334791620Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein9e-109394
NC_011353:1307106:1331574133157413331931620Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeintegral membrane protein9e-109394
NC_002655:1448605:1471760147176014733791620Escherichia coli O157:H7 EDL933, complete genomehypothetical protein9e-109394
NC_002655:1053082:1076153107615310777721620Escherichia coli O157:H7 EDL933, complete genomehypothetical protein9e-109394
NC_013353:3853082:3863541386354138651601620Escherichia coli O103:H2 str. 12009, complete genomemembrane-associated, metal-dependent hydrolase2e-108393
AP010958:3853082:3863541386354138651601620Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative membrane-associated, metal-dependent hydrolase2e-108393
NC_009348:3029963:3059680305968030613051626Aeromonas salmonicida subsp. salmonicida A449, complete genomemembrane-associated, metal-dependent hydrolase6e-108391
NC_014541:3927500:3947380394738039490231644Ferrimonas balearica DSM 9799 chromosome, complete genomephosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase1e-106387
NC_019940:929071:9307079307079323231617Thioflavicoccus mobilis 8321 chromosome, complete genomemembrane-associated, metal-dependent hydrolase2e-104380
NC_017518:1701958:1722848172284817244821635Neisseria meningitidis NZ-05/33 chromosome, complete genomeputative sulfatase5e-103375
NC_003112:1685330:1701922170192217035561635Neisseria meningitidis MC58, complete genomeYhbX/YhjW/YijP/YjdB family protein5e-103375
NC_013446:2820000:2828782282878228303651584Comamonas testosteroni CNB-2, complete genomesulfatase5e-101369
NC_010002:1879220:1912670191267019144361767Delftia acidovorans SPH-1, complete genomesulfatase1e-97357
NC_015633:2565753:2589243258924325908921650Vibrio anguillarum 775 chromosome chromosome I, complete sequenceIntegral membrane protein8e-97354
NC_018679:278250:2846142846142862211608Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completesulfatase3e-95349
NC_002695:1364833:1387988138798813892741287Escherichia coli O157:H7 str. Sakai, complete genomeputative outer membrane protein6e-92338
NC_008782:1917634:1943299194329919449631665Acidovorax sp. JS42, complete genomesulfatase4e-90332
NC_015497:3794000:3800182380018238017891608Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomesulfatase2e-86320
NC_014733:2095996:2116998211699821186321635Methylovorus sp. MP688 chromosome, complete genomesulfatase5e-85315
NC_012969:2136243:2220333222033322219941662Methylovorus glucosetrophus SIP3-4 chromosome, complete genomesulfatase6e-84311
NC_011138:397329:397727397727398629903Alteromonas macleodii 'Deep ecotype', complete genomeputative sulfatase2e-78293
NC_011745:3443371:347501534750153475890876Escherichia coli ED1a chromosome, complete genomehypothetical protein2e-75283
NC_009441:3597020:3610835361083536123551521Flavobacterium johnsoniae UW101 chromosome, complete genomelipid A phosphoethanolamine transferase6e-59228
NC_015968:204969:2108302108302125211692Enterobacter asburiae LF7a chromosome, complete genomesulfatase3e-40166
NC_004337:3590323:3679848367984836815721725Shigella flexneri 2a str. 301, complete genomehypothetical protein2e-39164
NC_011601:3951324:3957076395707639587671692Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomephosphoethanolamine transferase3e-39163
NC_009436:203365:2033652033652050561692Enterobacter sp. 638, complete genomephosphoethanolamine transferase4e-39163
NC_006347:3843228:3866890386689038685901701Bacteroides fragilis YCH46, complete genomeputative integral membrane protein7e-38159
NC_020064:79422:1020591020591037981740Serratia marcescens FGI94, complete genomeputative membrane-associated, metal-dependent hydrolase2e-37157
NC_013961:3709800:3714043371404337157101668Erwinia amylovora, complete genomeUPF0141 inner membrane protein yhjW1e-37157
NC_013971:3713000:3714301371430137159681668Erwinia amylovora ATCC 49946 chromosome, complete genomephosphoethanolamine transferase EptB1e-37157
NC_012214:3931824:3934861393486139365281668Erwinia pyrifoliae Ep1/96, complete genomephosphoethanolamine transferase8e-37155
NC_015566:1941407:1953534195353419551861653Serratia sp. AS12 chromosome, complete genomesulfatase1e-36155
NC_015224:4386599:4391193439119343928841692Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,phosphoethanolamine transferase4e-36153
NC_012559:2854640:2876074287607428777621689Laribacter hongkongensis HLHK9, complete genomehypothetical protein1e-34148
NC_017047:1434500:1458716145871614603921677Rahnella aquatilis HX2 chromosome, complete genomephosphoethanolamine transferase4e-33142
NC_010465:62348:9231592315940061692Yersinia pseudotuberculosis YPIII, complete genomesulfatase1e-32141
NC_015061:1481500:1505773150577315074491677Rahnella sp. Y9602 chromosome, complete genomesulfatase2e-32140
NC_008150:4601202:4616617461661746183081692Yersinia pestis Antiqua, complete genomehypothetical protein2e-32140
NC_007705:1583373:1606777160677716083661590Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomehypothetical protein5e-28126
NC_006834:1602994:1624537162453716261951659Xanthomonas oryzae pv. oryzae KACC10331, complete genomeconserved hypothetical protein, putative integral membrane protein7e-28125
NC_017267:3612682:3616586361658636181751590Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completesulfatase4e-27123
NC_010688:1192410:1247633124763312492911659Xanthomonas campestris pv. campestris, complete genomehypothetical protein3e-26120
NC_013173:1259898:1266638126663812683321695Desulfomicrobium baculatum DSM 4028, complete genomesulfatase9e-1995.5
NC_013446:2820000:285039728503972851395999Comamonas testosteroni CNB-2, complete genomesulfatase4e-1686.7
NC_015437:27325:7424574245760741830Selenomonas sputigena ATCC 35185 chromosome, complete genomesulfatase2e-1584.3
NC_016514:1142607:1165290116529011668701581Enterobacter cloacae EcWSU1 chromosome, complete genomephosphoethanolamine transferase yhbX6e-1582.8
NC_010002:1879220:1902189190218919038441656Delftia acidovorans SPH-1, complete genomesulfatase6e-1582.8
NC_010519:416658:4391604391604407761617Haemophilus somnus 2336 chromosome, complete genomesulfatase1e-1275.5
NC_013364:928486:9310929310929326751584Escherichia coli O111:H- str. 11128, complete genomeputative hydrolase, inner membrane3e-1170.5
NC_013353:922937:9255439255439271261584Escherichia coli O103:H2 str. 12009, complete genomehydrolase, inner membrane3e-1170.5
AP010958:922937:9255439255439271261584Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted hydrolase, inner membrane3e-1170.5
NC_013416:875758:8877058877058892191515Aggregatibacter actinomycetemcomitans D11S-1, complete genomeDca1e-0965.5
NC_008253:4735418:4740756474075647422551500Escherichia coli 536, complete genomehypothetical protein YjgX (putative sulfatase)4e-0757
NC_011138:397329:400142400142400870729Alteromonas macleodii 'Deep ecotype', complete genomelipid A phosphoethanolamine transferase, associated with polymyxin resistance4e-0653.5