Pre_GI Gene

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Host: NC_011353 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011353:1307106 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
130710613084161311efflux ABC transporter permeaseQuickGO ontologyBLASTP
13084251309213789hypothetical proteinBLASTP
130921013105981389hypothetical proteinBLASTP
13106091311553945malonyl CoA-acyl carrier protein transacylaseQuickGO ontologyBLASTP
13115501312536987hypothetical proteinBLASTP
131290313141051203integraseQuickGO ontologyBLASTP
131429213161091818hypothetical proteinBLASTP
13171221317241120hypothetical protein
131816013195451386hypothetical proteinBLASTP
13204411321328888IS629 transposase orfBQuickGO ontologyBLASTP
13213281321654327IS629 transposase orfAQuickGO ontologyBLASTP
13217151322242528hypothetical proteinBLASTP
132239713247572361type III restriction enzyme res subunit familyQuickGO ontologyBLASTP
13249191325095177hypothetical proteinBLASTP
132551413270521539IS66 family element transposaseQuickGO ontologyBLASTP
13271021327449348IS66 family element orf2QuickGO ontologyBLASTP
13274461327607162IS66 family element orf1QuickGO ontologyBLASTP
13279021328213312transposase InsI for insertion sequence element IS30BCDQuickGO ontologyBLASTP
13283531329171819ISSd1 transposase orfBQuickGO ontologyBLASTP
13292841329823540complement resistance proteinQuickGO ontologyBLASTP
13309051331075171hypothetical protein
13311221331481360diacylglycerol kinaseQuickGO ontologyBLASTP
133157413331931620integral membrane proteinQuickGO ontologyBLASTP