Pre_GI: BLASTP Hits

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Query: NC_004578:4465247:4476573 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 4476573, End: 4477253, Length: 681

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:5481629:549365054936505494351702Pseudomonas fluorescens Pf-5, complete genomeexsB protein5e-114410
NC_011770:4763506:477809447780944778768675Pseudomonas aeruginosa LESB58, complete genomehypothetical protein1e-110398
NC_008463:4566976:459123845912384591912675Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein1e-110398
NC_002516:1031386:105962210596221060296675Pseudomonas aeruginosa PAO1, complete genomehypothetical protein1e-110398
NC_018080:4465618:447930844793084479982675Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein4e-110397
NC_014394:2765261:278089227808922781569678Gallionella capsiferriformans ES-2 chromosome, complete genomeexsB protein3e-93341
NC_014733:2363838:238976323897632390440678Methylovorus sp. MP688 chromosome, complete genomeexsb protein3e-91334
NC_007947:2447635:248956124895612490250690Methylobacillus flagellatus KT, complete genomeExsB7e-91333
NC_015726:2817352:283167428316742832357684Cupriavidus necator N-1 chromosome 1, complete sequence7-cyano-7-deazaguanine synthase4e-85314
NC_012856:737170:762815762815763489675Ralstonia pickettii 12D chromosome 1, complete genomeexsB protein1e-82306
NC_007973:2888824:290632429063242907007684Ralstonia metallidurans CH34 chromosome 1, complete sequenceExsB9e-82302
NC_010513:1162232:118498111849811185673693Xylella fastidiosa M12 chromosome, complete genometranscriptional regulator1e-81302
NC_004556:1132354:114268011426801143372693Xylella fastidiosa Temecula1, complete genometranscriptional regulator3e-81301
NC_002488:1775629:177562917756291776393765Xylella fastidiosa 9a5c, complete genometranscriptional regulator8e-81300
NC_003902:3544743:356046635604663561140675Xanthomonas campestris pv. campestris str. ATCC 33913, completetranscriptional regulator5e-79293
NC_013729:863743:897128897128897835708Kribbella flavida DSM 17836, complete genomeexsB protein4e-68257
NC_019673:2155669:217258621725862173287702Saccharothrix espanaensis DSM 44229 complete genome7-cyano-7-deazaguanine synthase4e-67254
NC_014972:3604534:362817936281793628868690Desulfobulbus propionicus DSM 2032 chromosome, complete genomepreQ(0) biosynthesis protein QueC9e-67253
NC_013926:614206:627319627319628032714Aciduliprofundum boonei T469 chromosome, complete genomeexsB protein7e-66250
NC_016627:3815690:383208038320803832769690Clostridium clariflavum DSM 19732 chromosome, complete genomepreQ(0) biosynthesis protein QueC1e-64246
NC_009012:3653111:366202236620223662690669Clostridium thermocellum ATCC 27405, complete genomeexsB protein3e-62238
NC_009091:1598044:160941616094161610090675Prochlorococcus marinus str. MIT 9301, complete genomehypothetical ATPase6e-51200
NC_014935:1511835:152648915264891527166678Nitratifractor saLSUginis DSM 16511 chromosome, complete genomepreq(0) biosynthesis protein quec3e-50198
NC_012440:1874896:188437218843721885055684Persephonella marina EX-H1, complete genomeExsB protein9e-43173
NC_013939:913890:939966939966940679714Deferribacter desulfuricans SSM1, complete genomeExsB family transcriptional regulator4e-42171
NC_017187:1923733:194405919440591944745687Arcobacter butzleri ED-1, complete genomeExsB family transcriptional regulator4e-41167
NC_014541:3642241:367294736729473673609663Ferrimonas balearica DSM 9799 chromosome, complete genomepreQ(0) biosynthesis protein QueC2e-40165
NC_006512:952894:965774965774966430657Idiomarina loihiensis L2TR, complete genomePredicted PP-loop superfamily ATPase6e-39160
NC_009714:671897:688789688789689451663Campylobacter hominis ATCC BAA-381, complete genomeExsB protein3e-38158
NC_012559:1064821:109298510929851093674690Laribacter hongkongensis HLHK9, complete genomealuminum resistance protein2e-35149
NC_016111:639819:675035675035675706672Streptomyces cattleya NRRL 8057, complete genomeQueuosine biosynthesis protein queC3e-34145
NC_015587:28997:289972899729647651Hydrogenobaculum sp. SHO chromosome, complete genomeexsB protein5e-34144
NC_020411:28995:289952899529645651Hydrogenobaculum sp. HO, complete genomeexsB protein5e-34144
NC_016830:530397:545819545819546523705Pseudomonas fluorescens F113 chromosome, complete genomeprotein QueC3e-33141
NC_004129:5781413:578979157897915790489699Pseudomonas fluorescens Pf-5, complete genomeexsB protein1e-32139
NC_012438:132456:139403139403140062660Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeExsB protein1e-31136
NC_020410:1301500:130422913042291304888660Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete7-cyano-7-deazaguanine synthase3e-31135
NC_017195:1411936:141695214169521417611660Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeExsB protein8e-31133
NC_015675:6276357:629650062965006297198699Mesorhizobium opportunistum WSM2075 chromosome, complete genomeexsB protein2e-30132
NC_014923:5721686:574182957418295742527699Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeexsB protein2e-30132
NC_019973:5650646:567078956707895671487699Mesorhizobium australicum WSM2073, complete genomequeuosine biosynthesis protein QueC2e-30132
NC_013887:213699:216954216954217652699Methanocaldococcus sp. FS406-22 chromosome, complete genomeexsB protein2e-29128
NC_014008:2176633:218180321818032182525723Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeexsB protein1e-27123
NC_015172:3160249:316024931602493160944696Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeexsB protein2e-27122
NC_013156:154233:167596167596168294699Methanocaldococcus fervens AG86, complete genomeexsB protein2e-26119
NC_007778:3974344:397933239793323980027696Rhodopseudomonas palustris HaA2, complete genomeExsB1e-25116
NC_013016:419604:441009441009441668660Neisseria meningitidis alpha14 chromosome, complete genomeputative aluminum resistance protein2e-25115
NC_017501:1829500:183056718305671831226660Neisseria meningitidis 8013, complete genomehypothetical protein5e-25114
NC_017515:1744500:174703717470371747696660Neisseria meningitidis M04-240196 chromosome, complete genomeexsB protein5e-25114
NC_017516:1755500:175807917580791758738660Neisseria meningitidis H44/76 chromosome, complete genomeexsB protein4e-25114
NC_009053:1257302:126886312688631269531669Actinobacillus pleuropneumoniae L20, complete genomequeuosine biosynthesis protein QueC9e-25113
NC_017514:1721416:172238817223881723047660Neisseria meningitidis M01-240149 chromosome, complete genomeexsB protein1e-24113
NC_019907:845663:846049846049846765717Liberibacter crescens BT-1 chromosome, complete genomequeuosine biosynthesis protein QueC1e-23109
NC_009256:3540531:354491835449183545652735Burkholderia vietnamiensis G4 chromosome 1, complete sequenceexsB protein1e-23109
NC_014225:1403007:142402714240271424713687Waddlia chondrophila WSU 86-1044 chromosome, complete genomeQueuosine biosynthesis protein QueC2e-23109
NC_015676:1663700:168583916858391686546708Methanosalsum zhilinae DSM 4017 chromosome, complete genomeexsB protein9e-23107
NC_015151:1872280:1895533189553318970201488Vulcanisaeta moutnovskia 768-28 chromosome, complete genomeexsB protein1e-21103
NC_017075:1:125101251013238729Rubrivivax gelatinosus IL144, complete genome7-cyano-7-deazaguanine synthase7e-21100
NC_017082:532000:557758557758558486729Bradyrhizobium sp. S23321, complete genomehypothetical protein2e-2099.4
NC_014539:1:113771137712081705Burkholderia sp. CCGE1003 chromosome 1, complete sequenceexsB protein2e-2099.4
NC_008781:654289:674080674080674805726Polaromonas naphthalenivorans CJ2, complete genomeexsB protein9e-2097.1
NC_003413:37233:558485584856570723Pyrococcus furiosus DSM 3638, complete genomesuccinoglycan biosynthesis regulator3e-1995.1
NC_011979:2969969:298744629874462988036591Geobacter sp. FRC-32, complete genomeExsB family protein9e-1580.5
NC_003106:1899691:189969118996911900299609Sulfolobus tokodaii str. 7, complete genomehypothetical protein5e-1478.2
NC_009675:4644173:467333346733334673920588Anaeromyxobacter sp. Fw109-5 chromosome, complete genomeExsB family protein5e-1477.8
NC_016645:279232:299196299196299999804Pyrobaculum sp. 1860 chromosome, complete genomeExsB family protein8e-1270.9
NC_012589:783704:798735798735799376642Sulfolobus islandicus L.S.2.15, complete genomeExsB family protein1e-1170.1
NC_015572:4916430:492072349207234921328606Methylomonas methanica MC09 chromosome, complete genomeQueuosine synthesis-like protein3e-1168.9
NC_007494:739403:750218750218750841624Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceputative ExsB2e-1066.2
NC_007907:761486:777423777423778085663Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1066.2
NC_015424:3520783:352929035292903529685396Aeromonas veronii B565 chromosome, complete genome7-cyano-7-deazaguanine synthase 22e-0962.8
NC_011593:2014787:202752420275242028279756Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,ExsB family protein3e-0962
NC_008699:1132790:115717511571751157726552Nocardioides sp. JS614, complete genomeExsB family protein5e-0754.7
NC_007644:2318855:233130023313002331878579Moorella thermoacetica ATCC 39073, complete genomeExsB2e-0652.8