Pre_GI Gene

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Host: NC_004556 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004556:1132354 Xylella fastidiosa Temecula1, complete genome

Host Lineage: Xylella fastidiosa; Xylella; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1998 from a naturally infected Californian, USA grapevine. This organism was first identified in 1993 as the causal agent of citrus variegated chlorosis, a disease that affects varieties of sweet oranges. Other strains of this species cause a range of diseases in mulberry, pear, almond, elm, sycamore, oak, maple, pecan and coffee which collectively result in multimillion dollar devastation of economically important plants. It does not contain a type III secretion system, but possesses genes for a type II secretion system for export of exoenzymes that degrade the plant cell wall and allow the bacterium to colonize the plant xylem. The cell produces an exopolysaccharide that is similar to the xanthan gum produced by Xanthomonas campestris pv. campestris.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11320111132382372hypothetical proteinBLASTP
113235411335411188hypothetical proteinBLASTP
11337701134081312hypothetical proteinBLASTP
11341411134488348hypothetical proteinBLASTP
11345791134803225hypothetical protein
11350241135272249hypothetical proteinBLASTP
113543411366271194hypothetical proteinBLASTP
11367361137065330hypothetical proteinBLASTP
113707811383821305hypothetical proteinBLASTP
11385131138641129hypothetical protein
11386611138912252hypothetical proteinBLASTP
11390381139349312hypothetical proteinBLASTP
113939011405651176hypothetical proteinBLASTP
11406531140937285hypothetical protein
11411621141374213hypothetical protein
11415131141776264hypothetical proteinBLASTP
11422531142627375hypothetical proteinBLASTP
1142563114263876tRNA-LysQuickGO ontologyBLASTP
11426801143372693transcriptional regulatorQuickGO ontologyBLASTP
114388811456571770aspartyl-tRNA synthetaseQuickGO ontologyBLASTP
114597511474921518fumarate hydrataseQuickGO ontologyBLASTP
114773311493341602carboxyl-terminal proteaseQuickGO ontologyBLASTP
114944911510561608carboxyl-terminal proteaseQuickGO ontologyBLASTP