Pre_GI: BLASTP Hits

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Query: NC_004578:2560473:2564794 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 2564794, End: 2565138, Length: 345

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010322:1817598:182171518217151822059345Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein1e-51201
NC_013592:956829:987474987474987818345Dickeya dadantii Ech586, complete genomeprotein of unknown function DUF4693e-21100
NC_003143:1033500:104919210491921049518327Yersinia pestis CO92, complete genomehypothetical protein2e-1994.7
NC_008150:361224:368624368624368950327Yersinia pestis Antiqua, complete genomehypothetical protein2e-1994.7
NC_004088:3661601:367727036772703677596327Yersinia pestis KIM, complete genomehypothetical protein2e-1994.7
NC_005810:3964468:396974939697493970075327Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-1994.7
NC_008149:3529428:354509635450963545422327Yersinia pestis Nepal516, complete genomehypothetical protein2e-1994.7
NC_010159:138879:155868155868156194327Yersinia pestis Angola, complete genomehypothetical protein2e-1994.7
NC_010634:3692321:370799737079973708323327Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-1994.7
NC_006155:3779381:379501537950153795341327Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-1994.7
NC_010465:933488:938862938862939188327Yersinia pseudotuberculosis YPIII, complete genomeprotein of unknown function DUF4692e-1994.7
NC_009381:627685:632965632965633291327Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-1994.7
NC_009708:986918:992398992398992724327Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-1994.7
NC_014029:1001000:100633810063381006664327Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-1994.7
NC_017154:941065:948483948483948809327Yersinia pestis D106004 chromosome, complete genomehypothetical protein2e-1994.7
NC_017160:945176:950456950456950782327Yersinia pestis D182038 chromosome, complete genomehypothetical protein2e-1994.7
NC_017168:50391:557565575656082327Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-1994.7
NC_017265:854492:859773859773860099327Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-1994.7
NC_012779:261438:279737279737280063327Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-1891.3
NC_013508:275081:296711296711297037327Edwardsiella tarda EIB202, complete genomehypothetical protein8e-1889
NC_011992:1912200:191559519155951915933339Acidovorax ebreus TPSY, complete genomeprotein of unknown function DUF4692e-1787.8
NC_010084:1054000:107159010715901071925336Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein8e-1785.9
NC_020418:1397112:142172914217291422055327Morganella morganii subsp. morganii KT, complete genomePutative protein YggL8e-1785.5
NC_016818:3851542:385330538533053853631327Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein2e-1684.7
NC_017047:3907854:390897339089733909299327Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein2e-1684.3
NC_015061:3840463:384158238415823841908327Rahnella sp. Y9602 chromosome, complete genomehypothetical protein2e-1684.3
NC_007974:785216:798109798109798459351Ralstonia metallidurans CH34 chromosome 2, complete sequenceprotein of unknown function DUF4699e-1062.4
NC_010645:369408:375893375893376273381Bordetella avium 197N, complete genomehypothetical protein2e-0960.8