Pre_GI: BLASTP Hits

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Query: NC_004547:913553:943025 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 943025, End: 944548, Length: 1524

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:1038500:1046997104699710485201524Pectobacterium wasabiae WPP163, complete genomeArabinogalactan endo-1,4-beta-galactosidase0986
NC_012917:833721:8612678612678627901524Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeArabinogalactan endo-1,4-beta-galactosidase0986
NC_020272:2748733:2748733274873327498451113Bacillus amyloliquefaciens IT-45, complete genomearabinogalactan endo-1,4-beta-galactosidase6e-137488
NC_017191:2174741:2176842217684221779601119Bacillus amyloliquefaciens XH7 chromosome, complete genomearabinogalactan endo-1,4-beta-galactosidase8e-137487
NC_017190:1196356:1223560122356012246781119Bacillus amyloliquefaciens LL3 chromosome, complete genomesecreted arabinogalactan oligomer endo-hydrolase8e-137487
NC_017188:2172706:2174807217480721759251119Bacillus amyloliquefaciens TA208 chromosome, complete genomesecreted arabinogalactan oligomer endo-hydrolase8e-137487
NC_014551:1279229:1306421130642113075391119Bacillus amyloliquefaciens DSM 7, complete genomesecreted arabinogalactan oligomer endo-hydrolase8e-137487
NC_019842:1203291:1224811122481112259231113Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,GanA1e-136486
NC_009725:1159637:1180093118009311812051113Bacillus amyloliquefaciens FZB42, complete genomeGanA3e-136485
NC_020410:1123121:1147771114777111488831113Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeGanA9e-135480
NC_014393:1782811:1790663179066317948084146Clostridium cellulovorans 743B chromosome, complete genomeLPXTG-motif cell wall anchor domain-containing protein5e-84311
NC_010688:673454:6780016780016790021002Xanthomonas campestris pv. campestris, complete genomeexported arabinogalactan endo-1,4-beta-galactosidase1e-66254
NC_017271:4193000:4213292421329242142931002Xanthomonas campestris pv. raphani 756C chromosome, completearabinogalactan endo-1,4-beta-galactosidase1e-65250
NC_016010:637535:6421136421136431141002Xanthomonas axonopodis pv. citrumelo F1 chromosome, completearabinogalactan endo-1,4-beta-galactosidase4e-64246
NC_014622:3525017:3547732354773235487841053Paenibacillus polymyxa SC2 chromosome, complete genomearabinogalactan endo-1,4-beta-galactosidase5e-62239
NC_014483:3235968:3257348325734832584001053Paenibacillus polymyxa E681 chromosome, complete genomeArabinogalactan endo-1,4-beta-galactosidase2e-60234
NC_008061:2106848:2136731213673121378941164Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceArabinogalactan endo-1,4-beta-galactosidase9e-60231
NC_008543:127675:1318771318771330401164Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceArabinogalactan endo-1,4-beta-galactosidase9e-60231
NC_004663:6104875:6118695611869561197561062Bacteroides thetaiotaomicron VPI-5482, complete genomearabinogalactan endo-1,4-beta-galactosidase1e-58227
NC_007508:689046:6890466890466905811536Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomearabinogalactan endo-1,4-beta-galactosidase precursor3e-58226
NC_013174:2321000:2323584232358423246781095Jonesia denitrificans DSM 20603, complete genomeArabinogalactan endo-1,4-beta-galactosidase3e-55216
NC_014933:3637172:3642122364212236433091188Bacteroides helcogenes P 36-108 chromosome, complete genomeArabinogalactan endo-1,4-beta-galactosidase2e-53210
NC_014221:2188250:2197714219771421988381125Truepera radiovictrix DSM 17093 chromosome, complete genomeArabinogalactan endo-1,4-beta-galactosidase6e-53208
NC_009848:3582384:3582384358238435835921209Bacillus pumilus SAFR-032, complete genomearabinogalactan endo-1,4-beta-galactosidase2e-51204
NC_009381:720000:7417767417767429781203Yersinia pestis Pestoides F chromosome, complete genomegalactosidase2e-47190
NC_017168:144000:1657971657971669991203Yersinia pestis A1122 chromosome, complete genomeputative galactosidase2e-47190
NC_015977:2309873:2328049232804923291221074Roseburia hominis A2-183 chromosome, complete genomearabinogalactan endo-1,4-beta-galactosidase9e-46184
NC_013172:466300:4718044718044734771674Brachybacterium faecium DSM 4810, complete genomearabinogalactan endo-1,4-beta-galactosidase2e-45183
NC_013410:3017983:3038408303840830399161509Fibrobacter succinogenes subsp. succinogenes S85 chromosome,arabinogalactan endo-1,4-beta-galactosidase4e-39162
NC_016593:956839:9715029715029739462445Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein5e-36152
NC_015275:882022:8862768862768900733798Clostridium lentocellum DSM 5427 chromosome, complete genomeArabinogalactan endo-1,4-beta-galactosidase9e-35148
NC_013172:466300:4734744734744746731200Brachybacterium faecium DSM 4810, complete genomearabinogalactan endo-1,4-beta-galactosidase3e-34146
NC_007508:1517393:1534486153448615356971212Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative galactosidase precursor5e-30132
NC_017271:1517820:1539758153975815409661209Xanthomonas campestris pv. raphani 756C chromosome, completearabinogalactan endo-1,4-beta-galactosidase1e-29131
NC_003919:1491001:1508458150845815096691212Xanthomonas axonopodis pv. citri str. 306, complete genomearabinogalactan endo-1,4-beta-galactosidase7e-28125
NC_016627:3205333:3209626320962632113501725Clostridium clariflavum DSM 19732 chromosome, complete genomebeta-xylosidase9e-24112
NC_013744:300000:3369123369123411534242Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completeRicin B lectin1e-20101
NC_016582:11820671:1185629811856298118578061509Streptomyces bingchenggensis BCW-1 chromosome, complete genomecellulose-binding family II protein9e-2098.6
NC_014623:1829000:1839391183939118416282238Stigmatella aurantiaca DW4/3-1 chromosome, complete genomealpha-glucosidase-like protein5e-1892.8
NC_015977:2309873:232438723243872324929543Roseburia hominis A2-183 chromosome, complete genomeArabinogalactan endo-1,4-beta-galactosidase6e-1789.4
NC_019897:1224798:1224798122479812260541257Thermobacillus composti KWC4 chromosome, complete genomebeta-glucanase/beta-glucan synthetase8e-1789
NC_013093:5922777:5926380592638059279031524Actinosynnema mirum DSM 43827, complete genomeAlpha-N-arabinofuranosidase2e-1584.7
NC_015977:2309873:2323270232327023244061137Roseburia hominis A2-183 chromosome, complete genomearabinogalactan endo-1,4-beta-galactosidase1e-1481.3
NC_015514:3508022:3533569353356935350711503Cellulomonas fimi ATCC 484 chromosome, complete genomealpha-N-arabinofuranosidase2e-1480.9
NC_015690:4361000:4387115438711543887821668Paenibacillus mucilaginosus KNP414 chromosome, complete genomeCellulase6e-1479.3
NC_010995:948041:9641469641469655101365Cellvibrio japonicus Ueda107, complete genomebeta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43C6e-1479.3
NC_011898:3772899:3779339377933937855606222Clostridium cellulolyticum H10, complete genomeprotein of unknown function DUF2916e-1479.3
NC_016935:4117485:4153215415321541548821668Paenibacillus mucilaginosus 3016 chromosome, complete genomecellulase6e-1479.3
NC_016791:1266404:1272471127247112778585388Clostridium sp. BNL1100 chromosome, complete genomehypothetical protein8e-1479
NC_013093:5922777:5922777592277759251612385Actinosynnema mirum DSM 43827, complete genomePectinesterase8e-1272.4
NC_016582:11878078:1188415611884156118863572202Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein8e-1272.4
NC_013132:7204082:7220238722023872238013564Chitinophaga pinensis DSM 2588, complete genomeRicin B lectin8e-1272.4
NC_015738:978794:9864649864649898923429Eggerthella sp. YY7918, complete genomehypothetical protein2e-1171.2
NC_014638:56500:6288162881654842604Bifidobacterium bifidum PRL2010 chromosome, complete genome1,4-beta-N-acetylmuramidase2e-1171.2
NC_014616:54500:5952559525621282604Bifidobacterium bifidum S17 chromosome, complete genome1,4-beta-N-acetylmuramidase2e-1170.9
NC_014623:4140565:4143900414390041453691470Stigmatella aurantiaca DW4/3-1 chromosome, complete genomericin b lectin domain-containing protein3e-1170.5
NC_013929:66500:7330273302749421641Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-1068.6
NC_013745:104385:1055371055371070691533Haloterrigena turkmenica DSM 5511 plasmid pHTUR02, completeglycoside hydrolase family 432e-1067.4
NC_013929:1119384:1144373114437311467332361Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein5e-1066.2
NC_009142:5519208:554459255445925545044453Saccharopolyspora erythraea NRRL 2338, complete genomealpha-glucosidase9e-1065.5
NC_013929:7278414:7308950730895073104551506Streptomyces scabiei 87.22 chromosome, complete genomeglycosyl hydrolase1e-0965.1
NC_014623:7133149:7152104715210471532731170Stigmatella aurantiaca DW4/3-1 chromosome, complete genomebeta-mannanase4e-0963.2
NC_010995:948041:9697379697379716111875Cellvibrio japonicus Ueda107, complete genomealpha-L-arabinfuranosidase, putative, abf43M3e-0860.5
NC_014623:2418762:242522624252262425765540Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein8e-0858.9
NC_015856:2146713:2174752217475221762661515Collimonas fungivorans Ter331 chromosome, complete genomealpha-L-arabinofuranosidase1e-0758.2
NC_013929:9450747:9461634946163494630641431Streptomyces scabiei 87.22 chromosome, complete genomearabinase3e-0757.4
NC_014393:1221000:1238262123826212403942133Clostridium cellulovorans 743B chromosome, complete genomePectate lyase/Amb allergen1e-0655.5
NC_014833:2855543:2855543285554328579692427Ruminococcus albus 7 chromosome, complete genomeRicin B lectin2e-0654.7
NC_003888:8594500:860318186031818603747567Streptomyces coelicolor A3(2), complete genomesecreted protein4e-0653.5