Pre_GI Gene

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Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:9450747 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
94503469450756411MerR family transcriptional regulatorQuickGO ontologyBLASTP
945074794533862640chaperoneQuickGO ontologyBLASTP
94533929453841450thioredoxin 2QuickGO ontologyBLASTP
94538489454111264hypothetical proteinBLASTP
945414794558921746thioredoxin reductaseQuickGO ontologyBLASTP
94559929456453462heat shock proteinQuickGO ontologyBLASTP
94566879457079393hypothetical proteinBLASTP
94572439457485243hypothetical proteinBLASTP
945789194590121122hypothetical proteinBLASTP
945902794604211395hypothetical protein
94606139460726114hypothetical protein
94611539461449297alcohol dehydrogenaseQuickGO ontologyBLASTP
946163494630641431arabinaseQuickGO ontologyBLASTP
94637019464699999LacI family transcriptional regulatorQuickGO ontologyBLASTP
946489594661961302sugar-binding lipoproteinQuickGO ontologyBLASTP
94662479467131885ABC transporterQuickGO ontologyBLASTP
94671389468034897ABC transporter permeaseQuickGO ontologyBLASTP
946803194706702640rhamnosidase AQuickGO ontologyBLASTP