Pre_GI Gene

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Host: NC_015275 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015275:882022 Clostridium lentocellum DSM 5427 chromosome, complete genome

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
8820228840972076glycoside hydrolase family 35QuickGO ontologyBLASTP
8842288862432016methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
8862768900733798Arabinogalactan endo-14-beta-galactosidaseQuickGO ontologyBLASTP
8901728921121941hypothetical protein
8923408937281389MATE efflux family proteinQuickGO ontologyBLASTP
893928894716789protein of unknown function DUF477QuickGO ontologyBLASTP
894719895288570LemA family proteinQuickGO ontologyBLASTP
8955588968801323PASPAC sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
8973958988911497anthranilate synthase component IQuickGO ontologyBLASTP
898888899454567glutamine amidotransferase of anthranilate synthaseQuickGO ontologyBLASTP
8994589004801023anthranilate phosphoribosyltransferaseQuickGO ontologyBLASTP
900477901265789Indole-3-glycerol-phosphate synthaseQuickGO ontologyBLASTP