Pre_GI: BLASTP Hits

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Query: NC_004547:1970686:1976824 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1976824, End: 1980243, Length: 3420

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012917:2921932:2936082293608229395133432Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeMethyltransferase type 1102106
NC_013592:1730505:1738842173884217422943453Dickeya dadantii Ech586, complete genomeMethyltransferase regulatory domain, predicted0941
NC_012912:1788308:1797617179761718010513435Dickeya zeae Ech1591, complete genomeMethyltransferase type 120869
NC_014121:1357339:1377923137792313812583336Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative SAM-dependent methyltransferases/Predicted O-linked N-acetylglucosamine transferase0694
NC_016514:2950860:2965370296537029687503381Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein0645
NC_007651:3656433:3656433365643336587782346Burkholderia thailandensis E264 chromosome I, complete sequenceTPR domain protein2e-91338
NC_010002:661696:6786256786256815492925Delftia acidovorans SPH-1, complete genomeTetratricopeptide TPR_2 repeat protein2e-86321
NC_014117:3375796:3377641337764133825454905Burkholderia sp. CCGE1002 chromosome chromosome 1, completeTetratricopeptide TPR_2 repeat protein3e-85317
NC_015563:606783:6147786147786175792802Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein2e-76288
NC_010002:960027:9682399682399701821944Delftia acidovorans SPH-1, complete genomeTPR repeat-containing protein6e-74280
NC_010162:9641549:9649807964980796518672061Sorangium cellulosum 'So ce 56', complete genomeTPR domain-containing protein1e-72275
NC_002939:2844240:2867897286789728696541758Geobacter sulfurreducens PCA, complete genomeTPR domain/SEC-C motif domain protein1e-68262
NC_010814:2217153:2227048222704822321925145Geobacter lovleyi SZ, complete genomeTPR repeat-containing protein2e-66255
NC_002977:1600350:1607847160784716099462100Methylococcus capsulatus str. Bath, complete genomeTPR domain protein1e-63245
NC_007963:2232000:2239021223902122432684248Chromohalobacter salexigens DSM 3043, complete genomesulfotransferase3e-63244
NC_013851:2211120:2227959222795922299592001Allochromatium vinosum DSM 180 chromosome, complete genomeTetratricopeptide TPR_2 repeat protein3e-63244
NC_008576:2011959:2028673202867320315792907Magnetococcus sp. MC-1, complete genomeTetratricopeptide TPR_2 repeat protein2e-58228
NC_017068:2569609:2578412257841225811712760Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein4e-58227
NC_013851:2211120:2226033222603322279311899Allochromatium vinosum DSM 180 chromosome, complete genomeTPR repeat-containing protein1e-57225
NC_010725:4035397:4100670410067041028412172Methylobacterium populi BJ001, complete genomeTetratricopeptide TPR_2 repeat protein2e-56221
NC_019902:97987:1077261077261099452220Thioalkalivibrio nitratireducens DSM 14787, complete genomeTPR domain protein, putative component of TonB system2e-53212
NC_017068:2569609:2582126258212625838141689Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein2e-48195
NC_008340:774206:7786307786307813952766Alkalilimnicola ehrlichei MLHE-1, complete genomemethyltransferase FkbM family2e-48194
NC_007604:41495:5260652606545071902Synechococcus elongatus PCC 7942, complete genomeTPR repeat2e-47191
NC_006576:1551939:1566358156635815682771920Synechococcus elongatus PCC 6301, complete genomeSPY protein2e-47191
NC_015186:132567:1445611445611467622202Acidiphilium multivorum AIU301, complete genomehypothetical protein4e-46187
NC_009484:98250:1119441119441141452202Acidiphilium cryptum JF-5 chromosome, complete genomehypothetical protein8e-46186
NC_010002:661696:6686236686236702841662Delftia acidovorans SPH-1, complete genomeTetratricopeptide domain protein1e-41172
NC_012791:2423466:2429404242940424316262223Variovorax paradoxus S110 chromosome 1, complete genomeTPR repeat-containing protein2e-38162
NC_012559:2563922:2575213257521325777322520Laribacter hongkongensis HLHK9, complete genomeTPR repeat protein1e-38162
NC_014722:1:1783017830195691740Burkholderia rhizoxinica HKI 454, complete genomemethyltransferase3e-38161
NC_003454:1346500:1359401135940113609541554Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeMethyltransferase8e-36153
NC_011989:2549252:2565675256567525677172043Agrobacterium vitis S4 chromosome 1, complete sequencehypothetical protein2e-35151
NC_010571:5127812:5138055513805551396621608Opitutus terrae PB90-1, complete genomeMethyltransferase type 121e-34149
NC_007513:75197:1170371170371192112175Synechococcus sp. CC9902, complete genomeTPR repeat4e-34147
NC_008820:1766973:1787759178775917889461188Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein7e-34146
NC_011884:732000:7479207479207501392220Cyanothece sp. PCC 7425, complete genomeTPR repeat-containing protein7e-32140
NC_008536:1462344:1476448147644814777641317Solibacter usitatus Ellin6076, complete genomeMethyltransferase type 122e-31139
NC_011884:732000:7456957456957479112217Cyanothece sp. PCC 7425, complete genomeTPR repeat-containing protein6e-30134
NC_016931:38350:5513355133567371605Rickettsia massiliae str. AZT80 chromosome, complete genomeputative methyltransferase6e-30134
NC_017042:77363:7736377363789671605Rickettsia rhipicephali str. 3-7-female6-CWPP chromosome, completeputative methyltransferase4e-30134
NC_017044:15697:3358733587351911605Rickettsia parkeri str. Portsmouth chromosome, complete genomePutative methyltransferase9e-30133
NC_010263:13826:3297832978345821605Rickettsia rickettsii str. Iowa, complete genomemethyltransferase2e-29132
NC_009882:13826:3298632986345901605Rickettsia rickettsii str. 'Sheila Smith', complete genomehypothetical protein2e-29132
NC_016908:13826:3298832988345921605Rickettsia rickettsii str. Colombia chromosome, complete genomemethyltransferase2e-29132
NC_016909:16465:3298032980345841605Rickettsia rickettsii str. Arizona chromosome, complete genomemethyltransferase2e-29132
NC_016911:13826:3297732977345811605Rickettsia rickettsii str. Hauke chromosome, complete genomemethyltransferase2e-29132
NC_016913:1134000:1134346113434611359501605Rickettsia rickettsii str. Brazil chromosome, complete genomemethyltransferase2e-29132
NC_016914:13826:3306533065346691605Rickettsia rickettsii str. Hino chromosome, complete genomemethyltransferase2e-29132
NC_009714:1404000:1420549142054914220931545Campylobacter hominis ATCC BAA-381, complete genomeputative methyltransferase2e-29132
NC_017043:735150:7525387525387541421605Rickettsia montanensis str. OSU 85-930 chromosome, complete genomeputative methyltransferase2e-29132
NC_009883:1429000:1451269145126914524891221Rickettsia bellii OSU 85-389, complete genomePutative methyltransferase1e-29132
NC_016915:13927:3302533025346291605Rickettsia rickettsii str. Hlp#2 chromosome, complete genomemethyltransferase3e-29131
NC_016639:13188:3371733717353211605Rickettsia slovaca 13-B chromosome, complete genomePutative methyltransferase3e-29131
NC_017065:13188:3371433714353181605Rickettsia slovaca str. D-CWPP chromosome, complete genomePutative methyltransferase3e-29131
NC_016930:11721:3126631266328701605Rickettsia philipii str. 364D chromosome, complete genomemethyltransferase3e-29131
NC_012633:12000:3037630376319801605Rickettsia africae ESF-5, complete genomePutative methyltransferase3e-29131
NC_003103:12114:3047130471320751605Rickettsia conorii str. Malish 7, complete genomehypothetical protein1e-28129
NC_004113:1026886:1034604103460410379843381Thermosynechococcus elongatus BP-1, complete genomehypothetical protein9e-28126
NC_007513:75197:1149021149021170822181Synechococcus sp. CC9902, complete genomeO-linked N-acetylglucosamine transferase SPINDLY family-like3e-27125
NC_007413:2961611:2974646297464629768682223Anabaena variabilis ATCC 29413, complete genomehypothetical protein3e-24115
NC_003272:637970:6548436548436570622220Nostoc sp. PCC 7120, complete genomehypothetical protein3e-24114
NC_017277:1283477:1292215129221512943682154Synechocystis sp. PCC 6803, complete genomehypothetical protein2e-23112
NC_017052:1283720:1292458129245812946112154Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein2e-23112
NC_017039:1283732:1292470129247012946232154Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein2e-23112
NC_000911:1284552:1293398129339812955512154Synechocystis sp. PCC 6803, complete genomehypothetical protein2e-23112
NC_007775:1002934:1020398102039810242493852Synechococcus sp. JA-3-3Ab, complete genomemethyltransferase, FkbM family1e-21105
NC_007643:2722265:2722265272226527277785514Rhodospirillum rubrum ATCC 11170, complete genomeGlycosyl transferase1e-20103
NC_007776:474361:4856834856834893183636Synechococcus sp. JA-2-3B'a(2-13), complete genomemethyltransferase, FkbM family2e-1792.4
NC_007776:474361:4743614743614763341974Synechococcus sp. JA-2-3B'a(2-13), complete genomeTPR domain protein2e-1482.4
NC_010571:5127812:5134282513428251367172436Opitutus terrae PB90-1, complete genomeTetratricopeptide TPR_2 repeat protein6e-1274.3
NC_007413:2961611:2965749296574929687723024Anabaena variabilis ATCC 29413, complete genomeGlycosyl transferase, family 27e-1067
NC_003272:637970:6503286503286533693042Nostoc sp. PCC 7120, complete genomehypothetical protein1e-0760.1
NC_017277:2039097:2059918205991820614381521Synechocystis sp. PCC 6803, complete genomehypothetical protein2e-0758.9
NC_000911:2043938:2061101206110120626211521Synechocystis sp. PCC 6803, complete genomehypothetical protein2e-0758.9
NC_018145:147759:1638201638201654631644Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completehypothetical protein7e-0757
NC_006526:1202000:1202225120222512038681644Zymomonas mobilis subsp. mobilis ZM4, complete genomehypothetical protein1e-0656.6