Pre_GI: BLASTP Hits

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Query: NC_004337:1065609:1066742 Shigella flexneri 2a str. 301, complete genome

Start: 1066742, End: 1068007, Length: 1266

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1984 from a patient in Beijing, China. It is similar to pathogenic Escherichia coli except for the more numerous insertion sequences and contains a virulence plasmid (pCP301). Causes enteric disease. Shigella This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017328:1075535:1076668107666810779331266Shigella flexneri 2002017 chromosome, complete genomePeroxidase ycdB precursor0872
NC_013361:1284579:1286600128660012878711272Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein0855
NC_010468:2809125:2825084282508428263551272Escherichia coli ATCC 8739, complete genomeDyp-type peroxidase family0854
AC_000091:1083798:1083798108379810850691272Escherichia coli W3110 DNA, complete genomehypothetical protein0854
NC_013364:1257801:1259822125982212610931272Escherichia coli O111:H- str. 11128, complete genomehypothetical protein0853
NC_011601:1114104:1116125111612511173961272Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein0849
NC_013716:1178383:1182156118215611834271272Citrobacter rodentium ICC168, complete genomeputative peroxidase0775
NC_015663:3466471:3470414347041434716971284Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein0733
NC_009778:2227627:2284583228458322858661284Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein0727
NC_006155:2084669:2084669208466920859731305Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-180631
NC_005810:1663672:1684954168495416862581305Yersinia pestis biovar Microtus str. 91001, complete genomeiron-dependent peroxidase9e-180629
NC_003143:2101902:2103043210304321043471305Yersinia pestis CO92, complete genomehypothetical protein9e-180629
NC_004088:2691565:2712481271248127137851305Yersinia pestis KIM, complete genomehypothetical protein9e-180629
NC_010159:2128157:2130185213018521314891305Yersinia pestis Angola, complete genomeDyp-type peroxidase family protein9e-180629
NC_009381:1414985:1431838143183814331421305Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein9e-180629
NC_014029:2388500:2405717240571724070211305Yersinia pestis Z176003 chromosome, complete genomehypothetical protein9e-180629
NC_017154:2100587:2102585210258521038891305Yersinia pestis D106004 chromosome, complete genomehypothetical protein9e-180629
NC_017160:2414000:2434723243472324360271305Yersinia pestis D182038 chromosome, complete genomehypothetical protein9e-180629
NC_017168:3535786:3556666355666635579701305Yersinia pestis A1122 chromosome, complete genomehypothetical protein9e-180629
NC_010465:2582080:2598055259805525993591305Yersinia pseudotuberculosis YPIII, complete genomeDyp-type peroxidase family7e-179627
NC_013592:1465015:1468874146887414701871314Dickeya dadantii Ech586, complete genomeDyp-type peroxidase family1e-178626
NC_020211:3151458:3165801316580131670991299Serratia marcescens WW4, complete genomedeferrrochelatase, periplasmic4e-177621
NC_012660:3179980:3180826318082631821481323Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein2e-137489
NC_008150:1384102:1386121138612113871701050Yersinia pestis Antiqua, complete genomehypothetical protein7e-131467
NC_007777:4016000:4037245403724540385131269Frankia sp. CcI3, complete genomeTat-translocated enzyme6e-111401
NC_015656:2900730:2902942290294229043151374Frankia symbiont of Datisca glomerata chromosome, complete genomeTat-translocated protein1e-110400
NC_007164:2446879:94829482106901209Corynebacterium jeikeium K411, complete genomeputative iron-dependent peroxidase1e-99363
NC_013715:1606396:1606396160639616077181323Rothia mucilaginosa DY-18, complete genomepredicted iron-dependent peroxidase7e-61234
NC_013192:1886337:1905223190522319064611239Leptotrichia buccalis DSM 1135, complete genomeDyp-type peroxidase family3e-60233
NC_013131:4422000:4425191442519144264981308Catenulispora acidiphila DSM 44928, complete genomeDyp-type peroxidase family4e-60232
NC_015683:1432995:1438854143885414401611308Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein2e-48193
NC_003450:1770324:1772655177265517738631209Corynebacterium glutamicum ATCC 13032, complete genomeiron-dependent peroxidase3e-48192
NC_006958:1771796:1774127177412717753351209Corynebacterium glutamicum ATCC 13032, complete genomePredicted iron-dependent peroxidase, secreted protein3e-48192
NC_006361:1720031:1742949174294917442501302Nocardia farcinica IFM 10152, complete genomeputative peroxidase2e-47190
NC_017031:1298450:1301507130150713028321326Corynebacterium pseudotuberculosis P54B96 chromosome, completeDyp-type peroxidase family protein8e-47188
NC_017305:1295321:1299102129910213004271326Corynebacterium pseudotuberculosis PAT10 chromosome, completeDyp-type peroxidase family protein8e-47188
NC_014329:1298644:1301701130170113030081308Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein6e-47188
NC_016781:1297782:1301521130152113028281308Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeDyp-type peroxidase family protein6e-47188
NC_016932:1284000:1286436128643612877431308Corynebacterium pseudotuberculosis 316 chromosome, complete genomeDyp-type peroxidase family protein6e-47188
NC_017300:1295344:1299083129908313003901308Corynebacterium pseudotuberculosis 1002 chromosome, completeDyp-type peroxidase family protein6e-47188
NC_017301:1297649:1301388130138813026981311Corynebacterium pseudotuberculosis C231 chromosome, completeDyp-type peroxidase family protein6e-47188
NC_017303:1297793:1301532130153213028421311Corynebacterium pseudotuberculosis I19 chromosome, complete genomeDyp-type peroxidase family protein6e-47188
NC_016785:1357500:1371829137182913731001272Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeputative iron-dependent peroxidase1e-45184
NC_016787:1350676:1387013138701313882841272Corynebacterium diphtheriae HC03 chromosome, complete genomeputative iron-dependent peroxidase1e-45184
NC_016788:1376000:1390478139047813917491272Corynebacterium diphtheriae HC04 chromosome, complete genomeputative iron-dependent peroxidase1e-45184
NC_016790:1345638:1363079136307913643501272Corynebacterium diphtheriae VA01 chromosome, complete genomeputative iron-dependent peroxidase1e-45184
NC_016782:1385800:1393946139394613952171272Corynebacterium diphtheriae 241 chromosome, complete genomeputative iron-dependent peroxidase2e-45183
NC_016783:1397975:1416025141602514172961272Corynebacterium diphtheriae INCA 402 chromosome, complete genomeputative iron-dependent peroxidase2e-45183
NC_016786:1359064:1393916139391613951871272Corynebacterium diphtheriae HC01 chromosome, complete genomeputative iron-dependent peroxidase2e-45183
NC_016789:1432000:1440671144067114419421272Corynebacterium diphtheriae PW8 chromosome, complete genomeputative iron-dependent peroxidase2e-45183
NC_016799:1439000:1447244144724414485151272Corynebacterium diphtheriae 31A chromosome, complete genomeputative iron-dependent peroxidase2e-45183
NC_016800:1411000:1423282142328214245531272Corynebacterium diphtheriae BH8 chromosome, complete genomeputative iron-dependent peroxidase2e-45183
NC_016801:1422500:1436934143693414382051272Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeputative iron-dependent peroxidase2e-45183
NC_016802:1317365:1379931137993113812021272Corynebacterium diphtheriae HC02 chromosome, complete genomeputative iron-dependent peroxidase4e-45182
NC_002935:1378566:1406797140679714080171221Corynebacterium diphtheriae NCTC 13129, complete genomePutative secreted protein5e-45182
NC_014550:3377834:3414461341446134156151155Arthrobacter arilaitensis Re117, complete genomeDyp-type peroxidase family protein8e-41168
NC_010545:1089286:1102091110209111032991209Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein2e-39163
NC_008150:1384102:138718713871871387426240Yersinia pestis Antiqua, complete genomehypothetical protein2e-32140
NC_008278:7409711:7429281742928174305401260Frankia alni ACN14a, complete genomeHypothetical protein, Putative Dyp-type iron-dependent peroxidase domain, putative secreted protein3e-32139
NC_019673:4974422:4984615498461549857301116Saccharothrix espanaensis DSM 44229 complete genomeDyp-type peroxidase family protein5e-21102
NC_008699:56500:5659556595580401446Nocardioides sp. JS614, complete genomeDyp-type peroxidase family9e-0858.5
NC_006155:3237990:324284532428453243744900Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-0653.9
NC_010634:3155741:316059631605963161495900Yersinia pseudotuberculosis PB1/+, complete genomeDyp-type peroxidase family protein2e-0653.9
NC_012560:5338707:687768777758882Azotobacter vinelandii DJ, complete genomeDyp-type peroxidase protein2e-0653.9
NC_009708:1497898:151142115114211512320900Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeDyp-type peroxidase family protein6e-0652.4