Pre_GI Gene

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Host: NC_011601 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011601:1114104 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11141041114934831high-affinity Fe2Pb2 permeaseQuickGO ontologyBLASTP
111499211161191128hypothetical proteinBLASTP
111612511173961272hypothetical proteinBLASTP
111774711188111065hypothetical proteinBLASTP
11193741120060687hypothetical proteinBLASTP
112032611215431218integraseQuickGO ontologyBLASTP
112171311232421530hypothetical proteinBLASTP
112360211254371836hypothetical proteinBLASTP
11268121127375564hypothetical proteinBLASTP
11290321129571540hypothetical protein
112985811377327875Efa1LifA-like proteinQuickGO ontologyBLASTP
11382031138709507T3SS secreted effector NleE-like protein with internal deletion of 56 aaQuickGO ontologyBLASTP
11442981144840543transposaseQuickGO ontologyBLASTP
11448921145218327transposase Orf1 of IS629QuickGO ontologyBLASTP
11452151146105891transposase Orf2 of IS629QuickGO ontologyBLASTP
114763911486611023transposase Orf1 of IS100QuickGO ontologyBLASTP
11486611149440780transposaseIS proteinQuickGO ontologyBLASTP
11502681150984717hypothetical proteinBLASTP
115098411540793096HsdR family type I site-specific deoxyribonucleaseQuickGO ontologyBLASTP