Pre_GI: BLASTP Hits

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Query: NC_004129:4093610:4095118 Pseudomonas fluorescens Pf-5, complete genome

Start: 4095118, End: 4096425, Length: 1308

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002947:5386489:5407428540742854087351308Pseudomonas putida KT2440, complete genomeaminopeptidase, putative0775
NC_018644:446102:4644934644934657791287Alpha proteobacterium HIMB59 chromosome, complete genomeMetallopeptidase family M24,creatininase/prolidase family protein9e-103374
NC_015733:2581324:2586761258676125880891329Pseudomonas putida S16 chromosome, complete genomemetallopeptidase-like protein3e-101369
NC_007963:2644930:2669907266990726711901284Chromohalobacter salexigens DSM 3043, complete genomepeptidase M242e-88326
NC_016943:1560000:1572821157282115740981278Blastococcus saxobsidens DD2, complete genomeproline dipeptidase2e-74280
NC_008148:1567703:1578809157880915801191311Rubrobacter xylanophilus DSM 9941, complete genomepeptidase M241e-68260
NC_014654:188835:1953221953221965331212Halanaerobium sp. 'sapolanicus' chromosome, complete genomepeptidase M242e-26120
NC_008705:4053070:4053070405307040542031134Mycobacterium sp. KMS, complete genomepeptidase M242e-1377.8
NC_008146:4019711:4018588401858840197211134Mycobacterium sp. MCS, complete genomepeptidase M242e-1377.8
NC_007164:1434305:1458021145802114591121092Corynebacterium jeikeium K411, complete genomeputative dipeptidase3e-1273.2
NC_017179:2539031:2554246255424625553251080Clostridium difficile BI1, complete genomeXaa-Pro dipeptidase1e-1068.6
NC_013315:2531019:2546234254623425473131080Clostridium difficile CD196 chromosome, complete genomeXaa-Pro dipeptidase1e-1068.6
NC_013316:2623199:2626790262679026278691080Clostridium difficile R20291, complete genomeputative Xaa-Pro dipeptidase1e-1068.6
NC_016783:1313008:1352139135213913532301092Corynebacterium diphtheriae INCA 402 chromosome, complete genomeputative metallopeptidase9e-1065.5
NC_016787:1276983:1317258131725813183491092Corynebacterium diphtheriae HC03 chromosome, complete genomeputative metallopeptidase9e-1065.5
NC_016790:1259356:1294640129464012957311092Corynebacterium diphtheriae VA01 chromosome, complete genomeputative metallopeptidase9e-1065.5
NC_016802:1317365:1328739132873913298301092Corynebacterium diphtheriae HC02 chromosome, complete genomeputative metallopeptidase9e-1065.5
NC_016788:1315877:1327250132725013283411092Corynebacterium diphtheriae HC04 chromosome, complete genomeputative metallopeptidase7e-1065.5
NC_015680:663341:6641466641466651921047Pyrococcus yayanosii CH1 chromosome, complete genomeX-Pro dipeptidase7e-1065.5
NC_016789:1334514:1373647137364713747381092Corynebacterium diphtheriae PW8 chromosome, complete genomeputative metallopeptidase1e-0965.1
NC_016799:1343020:1383292138329213843831092Corynebacterium diphtheriae 31A chromosome, complete genomeputative metallopeptidase1e-0965.1
NC_016800:1344189:1356404135640413574951092Corynebacterium diphtheriae BH8 chromosome, complete genomeputative metallopeptidase1e-0965.1
NC_016801:1361597:1372967137296713740581092Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeputative metallopeptidase1e-0965.1
NC_016782:1316467:1327840132784013289311092Corynebacterium diphtheriae 241 chromosome, complete genomeputative metallopeptidase1e-0965.1
NC_016786:1316436:1327810132781013289011092Corynebacterium diphtheriae HC01 chromosome, complete genomeputative metallopeptidase1e-0965.1
NC_016785:1297208:1309423130942313105141092Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeputative metallopeptidase1e-0965.1
NC_002935:1315019:1354148135414813552451098Corynebacterium diphtheriae NCTC 13129, complete genomePutative metallopeptidase1e-0964.7
NC_014219:2491021:2500894250089425019551062Bacillus selenitireducens MLS10 chromosome, complete genomepeptidase M241e-0964.3
NC_014926:295988:3046643046643056951032Thermovibrio ammonificans HB-1 chromosome, complete genomepeptidase M242e-0964.3
NC_017195:1411936:1431450143145014325441095Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeXaa-Pro dipeptidase2e-0963.9
NC_013411:735838:7573307573307584241095Geobacillus sp. Y412MC61, complete genomepeptidase M244e-0963.2
NC_014206:771765:7930847930847941781095Geobacillus sp. C56-T3 chromosome, complete genomepeptidase M244e-0962.8
NC_007494:867901:8720508720508732281179Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceputative dipeptidase7e-0962.4
NC_015185:1114180:1116189111618911172141026Desulfurobacterium thermolithotrophum DSM 11699 chromosome,peptidase M249e-0962
NC_012034:1783912:1783912178391217849761065Anaerocellum thermophilum DSM 6725, complete genomepeptidase M242e-0860.8
NC_002935:1237585:1239661123966112408001140Corynebacterium diphtheriae NCTC 13129, complete genomePutative dipeptidase2e-0860.8
NC_002678:5020000:5035595503559550367701176Mesorhizobium loti MAFF303099, complete genomeprobable dipeptidase2e-0860.8
NC_013173:3854368:3860992386099238623861395Desulfomicrobium baculatum DSM 4028, complete genomeXaa-Pro dipeptidase2e-0860.8
NC_011979:3341099:3341625334162533426921068Geobacter sp. FRC-32, complete genomepeptidase M242e-0860.8
NC_015949:1180755:1180755118075511818191065Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomepeptidase M242e-0860.5
NC_011958:923789:9271199271199282971179Rhodobacter sphaeroides KD131 chromosome 2, complete genomePeptidase M243e-0860.1
NC_016790:1177349:1180226118022611813651140Corynebacterium diphtheriae VA01 chromosome, complete genomeputative dipeptidase4e-0860.1
NC_013720:5769910:5843354584335458444481095Pirellula staleyi DSM 6068, complete genomepeptidase M244e-0859.7
NC_014721:1777644:1777644177764417787081065Caldicellulosiruptor kristjanssonii 177R1B chromosome, completepeptidase m244e-0859.7
NC_016785:1193471:1193471119347111946101140Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeputative dipeptidase5e-0859.7
NC_016801:1255611:1258487125848712596261140Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeputative dipeptidase6e-0859.3
NC_016802:1212726:1212726121272612138651140Corynebacterium diphtheriae HC02 chromosome, complete genomeputative dipeptidase6e-0859.3
NC_016783:1239293:1239293123929312404321140Corynebacterium diphtheriae INCA 402 chromosome, complete genomeputative dipeptidase5e-0859.3
NC_016771:3633327:3635364363536436364341071Bacillus cereus NC7401, complete genomeproline dipeptidase9e-0858.5
NC_011658:3680829:3682866368286636839361071Bacillus cereus AH187 chromosome, complete genomeputative X-Pro dipeptidase9e-0858.5
NC_016799:1268706:1268706126870612698451140Corynebacterium diphtheriae 31A chromosome, complete genomeputative dipeptidase1e-0757.8
NC_016789:1257392:1257392125739212585311140Corynebacterium diphtheriae PW8 chromosome, complete genomeputative dipeptidase1e-0757.8
NC_002162:643446:6610486610486621211074Ureaplasma parvum serovar 3 str. ATCC 700970, complete genomeXAA-PRO aminopeptidase2e-0757.8
NC_017200:3737185:3739165373916537402351071Bacillus thuringiensis serovar finitimus YBT-020 chromosome,aminopeptidase2e-0757.4
NC_015848:2381148:2401430240143024025571128Mycobacterium canettii CIPT 140010059, complete genomeputative dipeptidase PepE4e-0756.2
NC_014335:3645500:3645669364566936467391071Bacillus cereus biovar anthracis str. CI chromosome, completeproline dipeptidase6e-0755.8
NC_016779:3660000:3660150366015036612201071Bacillus cereus F837/76 chromosome, complete genomeaminopeptidase YpdF7e-0755.5
NC_011773:3729500:3729702372970237307721071Bacillus cereus AH820 chromosome, complete genomeputative X-Pro dipeptidase7e-0755.5
NC_005957:3716487:3716487371648737175571071Bacillus thuringiensis serovar konkukian str. 97-27, completeproline dipeptidase7e-0755.5
NC_013421:553193:5761065761065774311326Pectobacterium wasabiae WPP163, complete genomepeptidase M247e-0755.5
NC_009483:2086021:2114235211423521153051071Geobacter uraniireducens Rf4 chromosome, complete genomepeptidase M241e-0655.1
NC_003997:3692776:3694813369481336958831071Bacillus anthracis str. Ames, complete genomeproline dipeptidase, putative1e-0654.7
NC_007530:3694940:3694940369494036960101071Bacillus anthracis str. 'Ames Ancestor', complete genomeproline dipeptidase, putative1e-0654.7
NC_005945:3693471:3695508369550836965781071Bacillus anthracis str. Sterne, complete genomeproline dipeptidase, putative1e-0654.7
NC_012659:3692803:3694840369484036959101071Bacillus anthracis str. A0248, complete genomeputative X-Pro dipeptidase1e-0654.7
NC_007793:1633080:1645001164500116460621062Staphylococcus aureus subsp. aureus USA300, complete genomeproline dipeptidase1e-0654.7
NC_014171:3779956:3779956377995637810261071Bacillus thuringiensis BMB171 chromosome, complete genomeXaa-Pro dipeptidase2e-0654.3
NC_008146:4019711:4019711401971140209791269Mycobacterium sp. MCS, complete genomepeptidase M242e-0653.9
NC_008705:4053070:4054193405419340554611269Mycobacterium sp. KMS, complete genomepeptidase M242e-0653.9
NC_006274:3773335:3775357377535737764271071Bacillus cereus E33L, complete genomeproline dipeptidase2e-0653.9
NC_015634:2547144:2560975256097525620181044Bacillus coagulans 2-6 chromosome, complete genomepeptidase M242e-0653.9
NC_014724:439594:4404604404604415661107Lactobacillus amylovorus GRL 1112 chromosome, complete genomeproline dipeptidase3e-0653.5
NC_015214:437733:4377334377334388391107Lactobacillus acidophilus 30SC chromosome, complete genomeX-Pro dipeptidase3e-0653.5
NC_007677:1847913:1864039186403918651091071Salinibacter ruber DSM 13855, complete genomeaminopeptidase P, putative8e-0652