Pre_GI: BLASTP Hits

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Query: NC_003911:2540453:2555372 Silicibacter pomeroyi DSS-3, complete genome

Start: 2555372, End: 2556031, Length: 660

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015675:4565500:4581355458135545824161062Mesorhizobium opportunistum WSM2075 chromosome, complete genomeintegrase family protein2e-64244
NC_009719:1135523:1153403115340311545451143Parvibaculum lavamentivorans DS-1 chromosome, complete genomeintegrase family protein4e-64244
NC_008686:1383891:1388943138894313899981056Paracoccus denitrificans PD1222 chromosome 1, complete sequencephage integrase family protein5e-58224
NC_008358:263458:2825832825832836441062Hyphomonas neptunium ATCC 15444, complete genomesite-specific recombinase, phage integrase family5e-58224
NC_017325:1488841:1500241150024115013261086Sinorhizobium meliloti SM11 chromosome, complete genomephage integrase family protein1e-32139
NC_009049:2131017:2151144215114421522411098Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencephage integrase family protein4e-32137
NC_015733:1943385:1947826194782619489471122Pseudomonas putida S16 chromosome, complete genomechorismate mutase family protein7e-32137
NC_004129:2201780:2207060220706022082021143Pseudomonas fluorescens Pf-5, complete genomesite-specific recombinase, phage integrase family3e-28125
NC_012660:1737423:1738537173853717396881152Pseudomonas fluorescens SBW25 chromosome, complete genomeputative phage integrase6e-27120
NC_015381:3457784:3491685349168534928421158Burkholderia gladioli BSR3 chromosome 1, complete sequencephage integrase9e-26116
NC_014910:3727887:3734725373472537357771053Alicycliphilus denitrificans BC chromosome, complete genomeintegrase family protein5e-25114
NC_012724:3100430:3117025311702531181251101Burkholderia glumae BGR1 chromosome 1, complete genomePhage integrase7e-23107
NC_018679:3843870:3849053384905338501291077Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completephage integrase family protein site-specific recombinase1e-22106
NC_011138:3881446:3884050388405038851921143Alteromonas macleodii 'Deep ecotype', complete genomesite-specific recombinase, phage integrase family protein2e-22105
NC_013961:3413011:341905934190593419892834Erwinia amylovora, complete genomeputative integrase/recombinase HI15729e-21100
NC_013364:4990365:500060150006015001365765Escherichia coli O111:H- str. 11128, complete genome2e-1892.8
NC_015850:1006980:1008592100859210096021011Acidithiobacillus caldus SM-1 chromosome, complete genomeputative phage integrase1e-1480.1
NC_011745:3443371:3443889344388934450131125Escherichia coli ED1a chromosome, complete genomeShufflon-specific DNA recombinase6e-1477.8
NC_015563:3571682:359131135913113592255945Delftia sp. Cs1-4 chromosome, complete genomeintegrase family protein5e-1271.2
NC_010084:534937:541878541878542864987Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase family protein5e-1271.2
NC_007651:3560652:356953635695363570204669Burkholderia thailandensis E264 chromosome I, complete sequencesite-specific recombinase, phage integrase family4e-1168.2
NC_008313:2685531:2688767268876726898131047Ralstonia eutropha H16 chromosome 1, complete sequencephage integrase family protein5e-1167.8
NC_008781:4178115:418438241843824185365984Polaromonas naphthalenivorans CJ2, complete genomephage integrase family protein2e-1066.2
NC_012880:3529017:3548469354846935495931125Dickeya dadantii Ech703, complete genomeintegrase family protein2e-1065.5
NC_004463:925140:940715940715941704990Bradyrhizobium japonicum USDA 110, complete genomeprobable site-specific integrase/recombinase1e-0963.5
NC_004547:611178:6162356162356173621128Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeshufflon-specific DNA recombinase2e-0962.8
NC_008380:4968492:497566649756664976619954Rhizobium leguminosarum bv. viciae 3841, complete genomeputative shufflon-specific DNA recombinase3e-0962
NC_010501:4379920:4392912439291243939341023Pseudomonas putida W619, complete genomeintegrase family protein5e-0961.2
NC_012796:1600600:1605716160571616067561041Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase5e-0961.2
NC_003295:1654000:1669739166973916708031065Ralstonia solanacearum GMI1000, complete genomePUTATIVE INTEGRASE/RECOMBINASE PROTEIN6e-0960.8
NC_012856:3000839:3011439301143930124941056Ralstonia pickettii 12D chromosome 1, complete genomeintegrase family protein1e-0860.1
NC_015684:362236:3848903848903859091020Oligotropha carboxidovorans OM5 chromosome, complete genomeshufflon-specific DNA recombinase1e-0860.1
NC_008060:2913671:2934382293438229354251044Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencephage integrase2e-0859.7
NC_008542:483761:4912204912204922631044Burkholderia cenocepacia HI2424 chromosome 1, complete sequencephage integrase family protein2e-0859.7
NC_010511:3106418:3119432311943231204481017Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein2e-0859.3
NC_015381:429940:4389684389684400111044Burkholderia gladioli BSR3 chromosome 1, complete sequencephage integrase2e-0858.9
NC_010172:4185904:4194558419455841955621005Methylobacterium extorquens PA1, complete genomeintegrase family protein4e-0858.2
NC_009659:543000:548709548709549695987Janthinobacterium sp. Marseille chromosome, complete genomephage integrase site specific recombinase5e-0857.8
NC_010943:325739:334344334344334940597Stenotrophomonas maltophilia K279a, complete genomeputative DNA recombinase5e-0857.8
NC_020063:3690308:3710476371047637115491074Enterobacteriaceae bacterium strain FGI 57, complete genomeIntegrase7e-0857.4
NC_014216:2538500:255809425580942559092999Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeintegrase family protein8e-0857.4
NC_010682:3313944:3349996334999633510511056Ralstonia pickettii 12J chromosome 1, complete sequenceintegrase family protein1e-0757
NC_008752:415599:431227431227432225999Acidovorax avenae subsp. citrulli AAC00-1, complete genomephage integrase family protein9e-0857
NC_013364:4990365:500026750002675000596330Escherichia coli O111:H- str. 11128, complete genome1e-0756.6
NC_008314:2686851:2690066269006626911061041Ralstonia eutropha H16 chromosome 2, complete sequencephage integrase family protein2e-0756.2
NC_016809:389561:4020064020064030491044Haemophilus influenzae 10810, complete genomeDLP12 prophage integrase2e-0755.8
NC_008800:1300500:1308992130899213101101119Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative integrase/recombinase protein3e-0755.5
NC_007626:3996000:4009811400981140109021092Magnetospirillum magneticum AMB-1, complete genomeIntegrase3e-0755.5
NC_008825:564392:5822395822395832431005Methylibium petroleiphilum PM1, complete genomehypothetical protein3e-0755.1
NC_007626:959684:9702309702309713091080Magnetospirillum magneticum AMB-1, complete genomeIntegrase4e-0754.7
NC_008782:841134:851174851174852145972Acidovorax sp. JS42, complete genomephage integrase family protein4e-0754.7
NC_015731:2148517:2150716215071621518041089Nitrosomonas sp. Is79A3 chromosome, complete genomeintegrase family protein5e-0754.7
NC_010511:6485500:649108764910876491626540Methylobacterium sp. 4-46 chromosome, complete genome5e-0754.7
NC_015942:403296:4146714146714157651095Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase family protein5e-0754.7
NC_018679:3843870:3850496385049638516621167Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeshufflon-specific DNA recombinase7e-0754.3
NC_003919:2435058:245801424580142458607594Xanthomonas axonopodis pv. citri str. 306, complete genomeDNA recombinase6e-0754.3
NC_014355:243543:2579012579012590221122Candidatus Nitrospira defluvii, complete genomephage integrase6e-0754.3
NC_007508:1446526:1462729146272914638351107Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeshufflon-specific recombinase1e-0653.5
NC_007651:3719191:373395337339533734393441Burkholderia thailandensis E264 chromosome I, complete sequencesite-specific recombinase, phage integrase family1e-0653.1
NC_012988:4633930:4641261464126146422741014Methylobacterium extorquens DM4, complete genomeintegrase2e-0652.4
NC_009052:4335754:4352962435296243540921131Shewanella baltica OS155, complete genomephage integrase family protein3e-0652
AC_000091:558920:5640385640385652011164Escherichia coli W3110 DNA, complete genomepredicted integrase7e-0650.8
NC_010473:498252:5033705033705045331164Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted integrase7e-0650.8
NC_000913:558920:5640385640385652011164Escherichia coli K12, complete genomeDLP12 prophage; predicted integrase7e-0650.8
NC_006905:368942:3728473728473740101164Salmonella enterica subsp. enterica serovar Choleraesuis strInt7e-0650.8
NC_012759:461680:4667984667984679611164Escherichia coli BW2952 chromosome, complete genomeDLP12 prophage; putative integrase7e-0650.8
NC_011751:643976:6449436449436461061164Escherichia coli UMN026 chromosome, complete genomeputative integrase; DLP12 prophage7e-0650.8
NC_011415:600375:6083326083326094951164Escherichia coli SE11 chromosome, complete genomephage integrase7e-0650.8
NC_012947:3231893:3247313324731332484761164Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeintegrase7e-0650.8
NC_012967:531000:5369295369295380921164Escherichia coli B str. REL606 chromosome, complete genomeputative integrase7e-0650.8
NC_015422:910292:9166939166939177841092Alicycliphilus denitrificans K601 chromosome, complete genomeintegrase family protein7e-0650.8
NC_011000:183928:2032112032112043381128Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative plasmid recombinase8e-0650.4
NC_008702:2039462:2046178204617820472541077Azoarcus sp. BH72, complete genomesite-specific recombinase, phage integrase family8e-0650.4