Pre_GI: BLASTP Hits

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Query: NC_002528:505951:518435 Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete

Start: 518435, End: 519763, Length: 1329

Host Lineage: Buchnera aphidicola; Buchnera; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is found in the pea aphid, Acyrthosiphon pisum.Aphid endosymbiont. Almost all aphids contain maternally transmitted bacteriocyte cells, which themselves contain bacteria called Buchnera. The aphids live on a restricted diet (plant sap), rich in carbohydrates, but poor in nitrogenous or other essential compounds. It is believed that the Buchnera provide the essential nutrients the host lacks. Besides a nutritional co-dependence, due to a co-existence of millions of years, Buchnera have lost the ability to produce cell surface components such as lipopolysaccharides. This makes for an obligate endosymbiont relationship between host and Buchnera. Buchnera are prokaryotic cells which belong to the gamma-Proteobacteria, closely related to the Enterobacteriaceae family. Phylogenetic studies using 16S rRNA indicate that the symbiotic relationship was established around 200-250 million years ago. Since Buchnera are closely related to Escherichia coli and Haemophilus influenzae, comparative genomic studies can shed light on the evolutionary mechanisms of intracellular endosymbiosis as well as the different underlying molecular basis between organisms with parasitic behavior and symbionts.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017253:509494:5193365193365206641329Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,trigger factor0662
NC_017256:515579:5192635192635205821320Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,trigger factor2e-141502
NC_017259:480656:4972764972764986041329Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,trigger factor2e-107389
NC_004061:498483:5196985196985210261329Buchnera aphidicola str. Sg (Schizaphis graminum), complete genometrigger factor9e-93340
NC_015663:2694373:2732886273288627341841299Enterobacter aerogenes KCTC 2190 chromosome, complete genometrigger factor4e-33142
NC_017328:385552:4080964080964093941299Shigella flexneri 2002017 chromosome, complete genometrigger factor Tig6e-32139
NC_004337:367687:3902323902323915301299Shigella flexneri 2a str. 301, complete genometrigger factor6e-32139
NC_016632:1049510:1055164105516410564621299Serratia symbiotica str. 'Cinara cedri' chromosome, completetig peptidyl-prolyl cis/trans isomerase (trigger factor)2e-22107
NC_010995:2312901:2324459232445923257721314Cellvibrio japonicus Ueda107, complete genometrigger factor7e-22105
NC_002947:2589951:2626913262691326282441332Pseudomonas putida KT2440, complete genometrigger factor3e-20100
NC_007645:2204066:2209109220910922104491341Hahella chejuensis KCTC 2396, complete genometrigger factor8e-2098.6
NC_007298:1824335:1847131184713118484351305Dechloromonas aromatica RCB, complete genometrigger factor1e-1791.3
NC_007940:1435701:1457403145740314587401338Rickettsia bellii RML369-C, complete genomeTrigger factor2e-1687.4
NC_021150:2348214:2358627235862723599371311Azotobacter vinelandii CA6, complete genometrigger factor2e-1687.4
NC_012560:2348202:2358615235861523599251311Azotobacter vinelandii DJ, complete genometrigger factor2e-1687.4
NC_004578:4204235:4208965420896542102751311Pseudomonas syringae pv. tomato str. DC3000, complete genometrigger factor7e-1685.5
NC_004129:4596040:4606486460648646077961311Pseudomonas fluorescens Pf-5, complete genometrigger factor3e-1583.2
NC_015222:2475792:2485807248580724871111305Nitrosomonas sp. AL212 chromosome, complete genometrigger factor8e-1375.5
NC_011992:1179084:1183753118375311850631311Acidovorax ebreus TPSY, complete genometrigger factor1e-1274.7
NC_008782:1277117:1281785128178512830951311Acidovorax sp. JS42, complete genometrigger factor1e-1274.7
NC_002927:2338549:2381475238147523827851311Bordetella bronchiseptica RB50, complete genometrigger factor1e-1274.7
NC_008702:2259430:2274050227405022753631314Azoarcus sp. BH72, complete genometrigger factor1e-1274.3
NC_010524:2761394:2775259277525927765661308Leptothrix cholodnii SP-6, complete genometrigger factor2e-1274.3
NC_015581:771482:8025498025498038621314Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeTrigger factor3e-1273.6
NC_010645:1523867:1545996154599615473061311Bordetella avium 197N, complete genometrigger factor5e-1272.8
NC_021177:2451000:2461753246175324631471395Streptomyces fulvissimus DSM 40593, complete genomeTIG Trigger factor1e-1171.2
NC_003919:1203405:1231479123147912327711293Xanthomonas axonopodis pv. citri str. 306, complete genometrigger factor2e-1170.9
NC_013929:6663889:6672015667201566734151401Streptomyces scabiei 87.22 chromosome, complete genomecell division trigger factor2e-1170.9
NC_016114:4922630:4930124493012449315241401Streptomyces flavogriseus ATCC 33331 chromosome, complete genometrigger factor3e-1170.5
NC_003888:2814360:2846000284600028474061407Streptomyces coelicolor A3(2), complete genometrigger factor1e-1067.8
NC_002939:1926084:1958330195833019596251296Geobacter sulfurreducens PCA, complete genometrigger factor5e-1065.9
NC_013315:3689422:3698958369895837003011344Clostridium difficile CD196 chromosome, complete genometrigger factor9e-1065.1
NC_011979:2892119:2897032289703228983391308Geobacter sp. FRC-32, complete genometrigger factor2e-0963.9
NC_002488:1099975:1136247113624711375421296Xylella fastidiosa 9a5c, complete genometrigger factor3e-0963.5
NC_004556:531000:5633185633185646131296Xylella fastidiosa Temecula1, complete genometrigger factor8e-0962
NC_010577:530917:5631265631265644211296Xylella fastidiosa M23, complete genometrigger factor8e-0962
NC_007205:841818:8432268432268446591434Candidatus Pelagibacter ubique HTCC1062, complete genometrigger factor1e-0861.6
NC_008710:621822:6407986407986421441347Borrelia turicatae 91E135, complete genometrigger factor, ppiase2e-0860.8
NC_007760:3848190:3862067386206738633561290Anaeromyxobacter dehalogenans 2CP-C, complete genometrigger factor3e-0860.5
NC_009342:2528426:2543233254323325445821350Corynebacterium glutamicum R chromosome, complete genometrigger factor5e-0859.3
NC_011768:1889853:1907526190752619088421317Desulfatibacillum alkenivorans AK-01, complete genometrigger factor7e-0858.9
NC_015846:790374:8108608108608121911332Capnocytophaga canimorsus Cc5 chromosome, complete genomepeptidyl-prolyl cis-trans isomerase, trigger factor1e-0758.2
NC_018643:482676:4850734850734865211449Alpha proteobacterium HIMB5 chromosome, complete genometrigger factor2e-0757.4
NC_015510:3543352:3572127357212735735421416Haliscomenobacter hydrossis DSM 1100 chromosome, complete genometrigger factor3e-0757
NC_009483:2201986:2217011221701122183121302Geobacter uraniireducens Rf4 chromosome, complete genometrigger factor3e-0757
NC_014165:2888961:2901500290150029028911392Thermobispora bispora DSM 43833 chromosome, complete genometrigger factor7e-0755.8
NC_014210:4053094:4065258406525840667031446Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,trigger factor6e-0755.8
NC_011565:777929:7798557798557811831329Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,trigger factor7e-0755.5
NC_014041:661352:6683626683626696841323Zunongwangia profunda SM-A87 chromosome, complete genometrigger factor1e-0654.7
NC_015144:1526669:1535818153581815371581341Weeksella virosa DSM 16922 chromosome, complete genometrigger factor1e-0654.7
NC_013894:543901:5547405547405560351296Thermocrinis albus DSM 14484 chromosome, complete genometrigger factor3e-0653.5
NC_019970:813917:8139178139178152151299Thermoanaerobacterium thermosaccharolyticum M0795, complete genometrigger factor3e-0653.5
NC_015391:1323171:1326977132697713282571281Carnobacterium sp. 17-4 chromosome, complete genometrigger factor3e-0653.5
NC_011969:4140000:4170552417055241718291278Bacillus cereus Q1 chromosome, complete genometrigger factor6e-0652.8
NC_014335:4181710:4213358421335842146351278Bacillus cereus biovar anthracis str. CI chromosome, completetrigger factor6e-0652.4
NC_012659:4273606:4282668428266842839451278Bacillus anthracis str. A0248, complete genometrigger factor6e-0652.4
NC_012472:4255729:4287373428737342886501278Bacillus cereus 03BB102, complete genometrigger factor6e-0652.4
NC_003997:4273579:4282641428264142839181278Bacillus anthracis str. Ames, complete genometrigger factor6e-0652.4
NC_017208:4435573:4458117445811744593941278Bacillus thuringiensis serovar chinensis CT-43 chromosome, completetrigger factor8e-0652
NC_014171:4317520:4343450434345043447271278Bacillus thuringiensis BMB171 chromosome, complete genometrigger factor8e-0652
NC_004722:4405363:4428541442854144298181278Bacillus cereus ATCC 14579, complete genometrigger factor8e-0652