Pre_GI Gene

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Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:6663889 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
66638896664713825DNA repair hydrolaseQuickGO ontologyBLASTP
666472466658151092transposaseQuickGO ontologyBLASTP
666591166671551245hypothetical proteinBLASTP
66671456667330186hypothetical protein
6667292666736978hypothetical protein
666738166685561176regulatory protein phosphataseQuickGO ontologyBLASTP
66685906669315726hypothetical proteinBLASTP
666939466705151122hypothetical proteinBLASTP
66711166671367252hypothetical proteinBLASTP
6671741667181474tRNA-ProQuickGO ontology
667201566734151401cell division trigger factorQuickGO ontologyBLASTP
66738066674429624ATP dependent Clp protease proteolytic subunit 1QuickGO ontologyBLASTP
66745126675192681ATP dependent Clp protease proteolytic subunit 2QuickGO ontologyBLASTP
667539666766821287ATP dependent Clp Protease ATP binding subunitQuickGO ontologyBLASTP
66767846677119336hypothetical protein
66771986678157960hypothetical proteinBLASTP
667829566809252631valyl tRNA synthetaseQuickGO ontologyBLASTP
668112966826371509folylpolyglutamate synthaseQuickGO ontologyBLASTP
66826486683001354hypothetical proteinBLASTP
66831396683552414nucleoside diphosphate kinaseQuickGO ontologyBLASTP
668391166849421032rod shape-determining proteinQuickGO ontologyBLASTP
66851176686070954rod shape-determining proteinQuickGO ontologyBLASTP
66860996686770672rod shape-determining proteinQuickGO ontologyBLASTP