Pre_GI: BLASTP Hits

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Query: NC_001263:2574755:2590824 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 2590824, End: 2592560, Length: 1737

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004578:4432983:4438161443816144398821722Pseudomonas syringae pv. tomato str. DC3000, complete genomemalate dehydrogenase6e-121434
NC_007005:1738500:1756231175623117579521722Pseudomonas syringae pv. syringae B728a, complete genomeMalate dehydrogenase (oxaloacetate decarboxylating) (NADP+)3e-119429
NC_012912:2901021:2903703290370329054001698Dickeya zeae Ech1591, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating)1e-118427
NC_014500:1862000:1915571191557119172681698Dickeya dadantii 3937 chromosome, complete genomemalate dehydrogenase, (decarboxylating, NAD-requiring) (malic enzyme)2e-117423
NC_012880:2871480:2871480287148028731771698Dickeya dadantii Ech703, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating)3e-117422
NC_013941:1857724:1879501187950118812251725Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeNAD-dependent malic enzyme1e-116420
NC_005966:159232:1650441650441667441701Acinetobacter sp. ADP1, complete genomeNAD-linked malate dehydrogenase, Rossman fold1e-116420
NC_010511:1351000:1365438136543813671471710Methylobacterium sp. 4-46 chromosome, complete genomemalate dehydrogenase6e-116418
NC_013508:1262333:1262333126233312640301698Edwardsiella tarda EIB202, complete genomemalate dehydrogenase (oxaloacetate-decarboxylating)4e-116418
NC_011750:1809943:1831114183111418328111698Escherichia coli IAI39 chromosome, complete genomemalate dehydrogenase9e-116417
NC_005139:2201820:2264429226442922661081680Vibrio vulnificus YJ016 chromosome I, complete sequencemalic enzyme1e-115417
NC_012917:1740542:1744084174408417457811698Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating)3e-115416
NC_002695:2056545:2075215207521520769391725Escherichia coli O157:H7 str. Sakai, complete genomeNAD-linked malate dehydrogenase7e-115414
NC_011353:1971145:1989815198981519915121698Escherichia coli O157:H7 str. EC4115 chromosome, complete genomemalate dehydrogenase4e-114412
NC_013008:1971662:1988791198879119904881698Escherichia coli O157:H7 str. TW14359 chromosome, complete genomemalate dehydrogenase4e-114412
NC_020063:2230000:2230359223035922320531695Enterobacteriaceae bacterium strain FGI 57, complete genomemalic enzyme3e-114412
NC_013861:469500:4911494911494928581710Legionella longbeachae NSW150, complete genomemalate dehydrogenase, (decarboxylating, NAD-requiring) (malic enzyme)1e-113410
NC_014622:3525017:3542720354272035444441725Paenibacillus polymyxa SC2 chromosome, complete genomemalate dehydrogenase4e-112405
NC_008228:816000:8187998187998204931695Pseudoalteromonas atlantica T6c, complete genomeMalate dehydrogenase (oxaloacetate decarboxylating) (NADP+)2e-111403
NC_014483:3235968:3252383325238332541011719Paenibacillus polymyxa E681 chromosome, complete genomeProbable NAD-dependent malic enzyme 2 (NAD-ME 2)2e-110400
NC_016582:10287865:1028786510287865102895441680Streptomyces bingchenggensis BCW-1 chromosome, complete genomemalate dehydrogenase7e-105381
NC_016941:807155:8105388105388121721635Staphylococcus aureus subsp. aureus MSHR1132, complete genomeputative malolactic enzyme7e-104378
NC_006526:1976779:2009459200945920111621704Zymomonas mobilis subsp. mobilis ZM4, complete genomemalic enzyme2e-103377
NC_020995:3252500:3269077326907732706991623Enterococcus casseliflavus EC20, complete genomemalolactic enzyme2e-101370
NC_009785:387910:4039814039814056061626Streptococcus gordonii str. Challis substr. CH1, complete genomemalate oxidoreductase4e-101369
NC_013740:15401:1540115401170441644Acidaminococcus fermentans DSM 20731, complete genomeMalate dehydrogenase (oxaloacetate- decarboxylating)7e-101368
NC_016804:2560000:2561568256156825632141647Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative [NAD] dependent malate oxidoreductase2e-97357
NC_012207:2573562:2574975257497525766211647Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative [NAD] dependent malate oxidoreductase2e-97357
NC_004757:427483:4754004754004771421743Nitrosomonas europaea ATCC 19718, complete genomeputative malate oxidoreductase (malic enzyme)2e-87323
NC_014311:1309562:1325508132550813271721665Ralstonia solanacearum PSI07 chromosome, complete genomemalate dehydrogenase9e-69261
NC_012883:104987:1247401247401260621323Thermococcus sibiricus MM 739, complete genomeMalate oxidoreductase5e-1893.2
NC_015435:21736:2698826988282741287Metallosphaera cuprina Ar-4 chromosome, complete genomemalic enzyme (NAD+)2e-1688.2
NC_009440:21947:2720027200284861287Metallosphaera sedula DSM 5348 chromosome, complete genomemalate dehydrogenase3e-1687.4
NC_004668:3184319:3202675320267532038471173Enterococcus faecalis V583, complete genomemalic enzyme family protein5e-1686.3
NC_017316:2710021:2724037272403727252691233Enterococcus faecalis OG1RF chromosome, complete genomemalate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))2e-1584.7
NC_015732:3145634:3160857316085731623081452Spirochaeta caldaria DSM 7334 chromosome, complete genomeMalate dehydrogenase2e-1584.7
NC_003106:282320:2955922955922969231332Sulfolobus tokodaii str. 7, complete genomehypothetical malate oxidoreductase7e-1582.8
NC_017276:2161535:2175939217593921772221284Sulfolobus islandicus REY15A chromosome, complete genomemalate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))3e-1480.5
NC_017275:2283074:2297478229747822987611284Sulfolobus islandicus HVE10/4 chromosome, complete genomemalate dehydrogenase3e-1480.5
NC_007181:1963887:1986520198652019878031284Sulfolobus acidocaldarius DSM 639, complete genomeNAD-dependent malic enzyme5e-1479.7
NC_012589:2379709:2395130239513023964281299Sulfolobus islandicus L.S.2.15, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))8e-1479.3
NC_013769:2363980:2378202237820223795001299Sulfolobus islandicus L.D.8.5 chromosome, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating)9e-1479
NC_012623:277113:2817682817682830661299Sulfolobus islandicus Y.N.15.51 chromosome, complete genomemalate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))9e-1479
NC_002754:2621884:2623145262314526244431299Sulfolobus solfataricus P2, complete genomeNAD-dependent malic enzyme (malate oxidoreductase)9e-1479
NC_012632:2352784:2367019236701923683171299Sulfolobus islandicus M.16.27 chromosome, complete genomemalate dehydrogenase1e-1378.6
NC_012588:2249874:2263808226380822651061299Sulfolobus islandicus M.14.25 chromosome, complete genomemalate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))1e-1378.6
NC_012726:2249831:2264069226406922653521284Sulfolobus islandicus M.16.4 chromosome, complete genomemalate dehydrogenase1e-1378.6
NC_016935:517054:5170545170545184571404Paenibacillus mucilaginosus 3016 chromosome, complete genomeNAD-dependent malic enzyme3e-1170.9
NC_013595:9149273:9161834916183491630271194Streptosporangium roseum DSM 43021, complete genomeMalate dehydrogenase (oxaloacetate- decarboxylating)6e-1169.7
NC_008699:1816392:1835522183552218367121191Nocardioides sp. JS614, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating)3e-1067.4
NC_014935:1223817:1263484126348412647851302Nitratifractor saLSUginis DSM 16511 chromosome, complete genomemalic protein nad-binding protein5e-1066.6
NC_009714:74500:9479194791960381248Campylobacter hominis ATCC BAA-381, complete genomeNADP-dependent malic enzyme (NADP-me)6e-1066.2
NC_016605:233087:2482432482432494031161Pediococcus claussenii ATCC BAA-344 chromosome, complete genomeMalate dehydrogenase (Oxaloacetate-decarboxylase)2e-0964.7
NC_014393:503230:5047675047675059361170Clostridium cellulovorans 743B chromosome, complete genomemalic protein NAD-binding3e-0964.3
NC_015573:162000:1765121765121777681257Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeMalate dehydrogenase5e-0963.5
NC_012560:4350465:4366423436642343676671245Azotobacter vinelandii DJ, complete genomemalate dehydrogenase (oxaloacetate decarboxylating) (NADP+)7e-0962.8
NC_021150:4350461:4366419436641943676631245Azotobacter vinelandii CA6, complete genomemalate dehydrogenase (oxaloacetate decarboxylating) (NADP+)7e-0962.8
NC_015499:197945:2010342010342022631230Thermodesulfobium narugense DSM 14796 chromosome, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))8e-0859.3
NC_014654:188835:2031072031072043391233Halanaerobium sp. 'sapolanicus' chromosome, complete genomemalic protein NAD-binding protein9e-0858.9
NC_014733:2201485:2218770221877022199841215Methylovorus sp. MP688 chromosome, complete genomemalate dehydrogenase (oxaloacetate-decarboxylating) (nadp(+))2e-0757.8
NC_015573:162000:1751471751471763221176Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomemalic protein NAD-binding protein5e-0756.6
NC_009439:574437:5770145770145782821269Pseudomonas mendocina ymp, complete genomemalate dehydrogenase7e-0756.2