Pre_GI Gene

Some Help

Host: NC_013008 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013008:1971662 Escherichia coli O157:H7 str. TW14359 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli O157:H7 str. TW14359 was isolated from spinach during the E. coli outbreak in 2006. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
197012119716651545nitrate reductase 2 NRZ subunit betaQuickGO ontologyBLASTP
197166219754023741nitrate reductase 2 NRZ subunit alphaQuickGO ontologyBLASTP
197548419768721389nitratenitrite transporterQuickGO ontologyBLASTP
197717819784371260non-LEE-encoded type III effectorQuickGO ontologyBLASTP
19785001979168669hypothetical proteinBLASTP
197992719810271101outer membrane porin proteinQuickGO ontologyBLASTP
19812861982167882hypothetical proteinBLASTP
19854591986343885formate dehydrogenase-N Fe-S subunit beta nitrate-inducibleQuickGO ontologyBLASTP
19863361986989654formate dehydrogenase-N subunit gammaQuickGO ontologyBLASTP
19872171987501285DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
198764719886571011alcohol dehydrogenaseQuickGO ontologyBLASTP
198879119904881698malate dehydrogenaseQuickGO ontologyBLASTP
1990645199078213830S ribosomal subunit S22QuickGO ontologyBLASTP
19908841991099216biofilm-dependent modulation proteinQuickGO ontologyBLASTP
19912661991406141hypothetical protein
19914441991875432osmotically inducible stress-inducible membrane proteinQuickGO ontologyBLASTP
19919311992857927D-ala-D-ala ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
19928501993836987D-ala-D-ala ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
19938331994729897ATP-dependent peptide transporter membrane subunitQuickGO ontologyBLASTP
19947261995706981D-ala-D-ala ABC transporter membrane proteinQuickGO ontologyBLASTP