Pre_GI: BLASTP Hits

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Query: NC_000962:1684005:1693996 Mycobacterium tuberculosis H37Rv, complete genome

Start: 1693996, End: 1694544, Length: 549

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain has been derived from the original human-lung H37 isolate in 1934, and has been used extensively worldwide in biomedical research. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019950:1689910:1698752169875216999001149Mycobacterium canettii CIPT 140060008 complete genomeLipopolysaccharide biosynthesis protein RffA6e-104375
NC_016804:1679357:1689348168934816904961149Mycobacterium bovis BCG str. Mexico chromosome, complete genomeTDP-4-oxo-6-deoxy-D-glucose transaminase1e-103374
NC_008769:1709078:1719069171906917202171149Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein1e-103374
NC_002945:1680751:1690741169074116918891149Mycobacterium bovis AF2122/97, complete genomeTDP-4-oxo-6-deoxy-D-glucose transaminase1e-103374
NC_012207:1681971:1691962169196216931101149Mycobacterium bovis BCG str. Tokyo 172, complete genomeTDP-4-oxo-6-deoxy-D-glucose transaminase1e-103374
NC_009565:1688642:169863316986331699175543Mycobacterium tuberculosis F11, complete genomehypothetical protein2e-101367
NC_012943:2707677:271892827189282719470543Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein2e-101367
NC_016768:2704350:271560127156012716143543Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein2e-101367
NC_010612:2777687:2788950278895027900981149Mycobacterium marinum M, complete genomepyridoxal phosphate-dependent enzyme, WecE4e-86316
NC_009525:1685522:169551316955131695953441Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein1e-80298
NC_015848:1708176:171816717181671718607441Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein1e-80298
NC_008702:2942246:2950840295084029519821143Azoarcus sp. BH72, complete genomeaminotransferase4e-65246
NC_008380:855246:8627448627448638591116Rhizobium leguminosarum bv. viciae 3841, complete genomeputative lipopolysaccharide biosynthesis protein3e-62237
NC_016112:3103716:3132649313264931337761128Methylomicrobium alcaliphilum chromosome, complete genomelipopolysaccharide biosynthesis protein, TDP-4-oxo-6-deoxy-D-glucose transaminase5e-57219
NC_014973:2894248:2904650290465029057861137Geobacter sp. M18 chromosome, complete genomeTDP-4-keto-6-deoxy-D-glucose transaminase1e-55215
NC_007796:3379614:3381854338185433830201167Methanospirillum hungatei JF-1, complete genomeTDP-4-keto-6-deoxy-D-glucose transaminase4e-46183
NC_015500:311845:3346893346893358161128Treponema brennaborense DSM 12168 chromosome, complete genomeTDP-4-keto-6-deoxy-D-glucose transaminase5e-46183
NC_005139:305420:3136013136013147521152Vibrio vulnificus YJ016 chromosome I, complete sequencelipopolysaccharide biosynthesis protein4e-45180
NC_007712:4067500:4082611408261140837321122Sodalis glossinidius str. 'morsitans', complete genomeputative lipopolysaccharide biosynthesis protein1e-44179
NC_006512:551312:5756335756335767751143Idiomarina loihiensis L2TR, complete genomePredicted pyridoxal phosphate-dependent enzyme9e-45179
NC_013410:2519441:2545567254556725467121146Fibrobacter succinogenes subsp. succinogenes S85 chromosome,TDP-4-oxo-6-deoxy-D-glucose transaminase6e-45179
NC_009719:3532587:3555397355539735565331137Parvibaculum lavamentivorans DS-1 chromosome, complete genomeTDP-4-oxo-6-deoxy-D-glucose transaminase4e-44177
NC_010524:674216:6891266891266902561131Leptothrix cholodnii SP-6, complete genomeTDP-4-keto-6-deoxy-D-glucose transaminase5e-44177
NC_017026:1686500:169501316950131695279267Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein6e-44176
NC_015633:413587:4172874172874184321146Vibrio anguillarum 775 chromosome chromosome I, complete sequencedTDP-4-dehydro-6-deoxy-D-glucose 4-aminotransferase4e-43174
NC_013595:7109039:7122343712234371235721230Streptosporangium roseum DSM 43021, complete genomeTDP-4-oxo-6-deoxy-D-glucose transaminase5e-42170
NC_014830:532122:5354495354495366031155Intrasporangium calvum DSM 43043 chromosome, complete genomeTDP-4-keto-6-deoxy-D-glucose transaminase2e-40164
NC_016604:297687:3233773233773245281152Mycobacterium rhodesiae NBB3 chromosome, complete genomeTDP-4-keto-6-deoxy-D-glucose transaminase1e-38159
NC_015138:1016000:1032145103214510332751131Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeTDP-4-keto-6-deoxy-D-glucose transaminase8e-36149
NC_011663:1709003:1720746172074617218701125Shewanella baltica OS223 chromosome, complete genomeTDP-4-oxo-6-deoxy-D-glucose transaminase2e-29128
NC_019960:425246:4356984356984368281131Prevotella dentalis DSM 3688 chromosome 1, complete sequenceTDP-4-keto-6-deoxy-D-glucose transaminase4e-28124
NC_007796:3351962:3368737336873733699121176Methanospirillum hungatei JF-1, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase5e-1373.9
NC_014121:3399685:3421841342184134229921152Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completePsb26e-1167
NC_009337:1448607:1452047145204714531591113Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase7e-1167
NC_018876:2277160:2282134228213422832731140Methanolobus psychrophilus R15 chromosome, complete genomehypothetical protein2e-1065.1
NC_010645:73573:9486894868960461179Bordetella avium 197N, complete genomelipopolysaccharide biosynthesis protein3e-1064.7
NC_015160:136055:1377161377161388791164Odoribacter splanchnicus DSM 20712 chromosome, complete genomeUDP-4-keto-6-deoxy-N-acetylglucosamine4-aminotra nsferase5e-1063.9
NC_020063:1659795:1667619166761916687701152Enterobacteriaceae bacterium strain FGI 57, complete genomeUDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase6e-1063.5
NC_011886:4336417:4343115434311543442241110Arthrobacter chlorophenolicus A6, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase7e-1063.5
NC_015666:1672740:1689451168945116906381188Halopiger xanaduensis SH-6 chromosome, complete genomeglutamine--scyllo-inositol transaminase9e-1063.2
NC_016002:3704006:3714039371403937151871149Pseudogulbenkiania sp. NH8B, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase1e-0962.8
NC_013665:738883:7551987551987563671170Methanocella paludicola SANAE, complete genomeputative aminotransferase2e-0962.4
NC_012856:604767:6315306315306326841155Ralstonia pickettii 12D chromosome 1, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase1e-0962.4
NC_008322:1595500:1604416160441616055791164Shewanella sp. MR-7, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase3e-0961.2
NC_016887:4403872:441971744197174420553837Nocardia cyriacigeorgica GUH-2, complete genomePyridoxal phosphate-dependent aminotransferase3e-0961.2
NC_014355:844248:8589768589768601361161Candidatus Nitrospira defluvii, complete genomeUDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase5e-0960.5
NC_005071:87907:1102641102641114301167Prochlorococcus marinus str. MIT 9313, complete genomecapsular polysaccharide biosynthesis protein6e-0960.5
NC_014394:707305:7073057073057084261122Gallionella capsiferriformans ES-2 chromosome, complete genomeGlutamine--scyllo-inositol transaminase7e-0960.1
NC_010814:794211:8119388119388130441107Geobacter lovleyi SZ, complete genomeGlutamine--scyllo-inositol transaminase1e-0859.7
NC_002927:118982:1609701609701622021233Bordetella bronchiseptica RB50, complete genomelipopolysaccharide biosynthesis protein1e-0859.3
NC_016620:341699:3730013730013741671167Bacteriovorax marinus SJ, complete genomelipopolysaccharide biosynthesis protein1e-0859.3
NC_010814:1551624:1557384155738415585351152Geobacter lovleyi SZ, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase2e-0858.5
NC_015577:1794560:1829539182953918307201182Treponema azotonutricium ZAS-9 chromosome, complete genomeUDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase3e-0858.2
NC_013522:698114:7177937177937189171125Thermanaerovibrio acidaminovorans DSM 6589, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase3e-0858.2
NC_016609:8271000:8284235828423582853561122Niastella koreensis GR20-10 chromosome, complete genomeglutamine--scyllo-inositol transaminase4e-0857.8
NC_009901:1693500:1715486171548617166491164Shewanella pealeana ATCC 700345, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase4e-0857.8
NC_011297:415760:4349744349744361311158Dictyoglomus thermophilum H-6-12, complete genomeUDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate)aminotransferase)4e-0857.8
NC_009454:2663539:2680416268041626815431128Pelotomaculum thermopropionicum SI, complete genomepyridoxal phosphate-dependent enzyme6e-0857
NC_016616:49388:7909379093802531161Dechlorosoma suillum PS chromosome, complete genomeUDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase7e-0856.6
NC_009092:1504363:1532052153205215332181167Shewanella loihica PV-4, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase2e-0755.8
NC_015276:632206:6434386434386446011164Marinomonas mediterranea MMB-1 chromosome, complete genomeUDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase2e-0755.8
NC_019673:2671458:2677077267707726781711095Saccharothrix espanaensis DSM 44229 complete genomePleiotropic regulatory protein1e-0755.8
NC_013421:3279499:3299129329912933002921164Pectobacterium wasabiae WPP163, complete genomeUDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase2e-0755.5
NC_013960:379461:3935973935973947571161Nitrosococcus halophilus Nc4 chromosome, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase2e-0755.1
NC_014973:1071500:1080891108089110819551065Geobacter sp. M18 chromosome, complete genomeglutamine--scyllo-inositol transaminase3e-0755.1
NC_010170:2374852:2393374239337423945341161Bordetella petrii, complete genomesugar aminotransferase3e-0754.7
NC_009615:3308538:3327871332787133290011131Parabacteroides distasonis ATCC 8503 chromosome, complete genomeaminotransferase4e-0754.3
NC_012856:604767:6170326170326181801149Ralstonia pickettii 12D chromosome 1, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase4e-0754.3
NC_009434:4140362:4152328415232841534881161Pseudomonas stutzeri A1501, complete genomeaminotransferase WbpE5e-0753.9
NC_014972:322056:3439703439703451001131Desulfobulbus propionicus DSM 2032 chromosome, complete genomeglutamine--scyllo-inositol transaminase7e-0753.5
NC_017075:4421486:4453670445367044548301161Rubrivivax gelatinosus IL144, complete genomeputative aminotransferase8e-0753.5
NC_017068:2436960:2489575248957524907231149Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative aminotransferase8e-0753.5
NC_020304:2677372:2693030269303026941871158Desulfocapsa sulfexigens DSM 10523, complete genomeUDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase9e-0753.1
NC_017079:5034500:5041721504172150428421122Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeputative aminotransferase1e-0652.8
NC_007759:2608173:2630586263058626317701185Syntrophus aciditrophicus SB, complete genomepleiotrophic regulatory protein1e-0652.8
NC_016815:1543308:1552202155220215533621161Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequenceRkpM, polysaccharide biosynthesis protein1e-0652.8
NC_013665:849508:8966058966058976901086Methanocella paludicola SANAE, complete genomeputative aminotransferase1e-0652.8
NC_014761:2189500:2205158220515822063001143Oceanithermus profundus DSM 14977 chromosome, complete genomeudp-4-keto-6-deoxy-n-acetylglucosamine 4-aminotransferase1e-0652.8
NC_008609:3119502:3145185314518531463001116Pelobacter propionicus DSM 2379, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase1e-0652.8
NC_009767:997500:1016687101668710178891203Roseiflexus castenholzii DSM 13941, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase2e-0652.4
NC_015589:1240197:1251560125156012527201161Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeUDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase2e-0652.4
NC_017059:31564:4752347523487341212Rhodospirillum photometricum DSM 122, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase2e-0652
NC_017506:2504746:2529850252985025310071158Marinobacter adhaerens HP15 chromosome, complete genomeDegT/DnrJ/EryC1/StrS family aminotransferase2e-0652
NC_007498:1774859:1786185178618517873721188Pelobacter carbinolicus DSM 2380, complete genomeputative amino-sugar biosynthesis protein2e-0652
NC_007517:1468719:1481248148124814823541107Geobacter metallireducens GS-15, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase2e-0652
NC_003910:2175305:2177597217759721787661170Colwellia psychrerythraea 34H, complete genomeflagellin modification protein/polysaccharide biosynthesis protein2e-0652
NC_012586:922095:9380119380119391711161Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceRkpM, polysaccharide biosynthesis protein2e-0652
NC_014915:3259440:3261433326143332626081176Geobacillus sp. Y412MC52 chromosome, complete genomeUDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase3e-0651.6
NC_013411:3251500:3255464325546432566391176Geobacillus sp. Y412MC61, complete genomeUDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase3e-0651.6
NC_015145:4191745:4194556419455641957221167Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomePLP-dependent enzyme possibly involved in cell wall biogenesis3e-0651.6
NC_011831:2410607:2444366244436624455351170Chloroflexus aggregans DSM 9485, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase3e-0651.6
NC_012108:4118888:4123830412383041249901161Desulfobacterium autotrophicum HRM2, complete genomeArnB3e-0651.6
NC_010516:2877407:2881331288133128824371107Clostridium botulinum B1 str. Okra, complete genomespore coat polysaccharide biosynthesis protein SpsC5e-0650.8
NC_009138:1138917:1139780113978011410181239Herminiimonas arsenicoxydans, complete genomeputative polysaccharide biosynthesis protein7e-0650.1
NC_008554:1177199:1195520119552011967131194Syntrophobacter fumaroxidans MPOB, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase7e-0650.1
NC_003551:154883:1548831548831560671185Methanopyrus kandleri AV19, complete genomePredicted pyridoxal-phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis1e-0549.7