Pre_GI: OUP Neighbours

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Query: NC_009648:4656187 Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome

D: 36.2804

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a patient in 1994. Opportunistic pathogen that causes multiple hospital-acquired infections. This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.

Number of Neighbours: 72




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_008358:2808299*Hyphomonas neptunium ATCC 15444, complete genome76.7463 %Subject Query24.851
NC_008343:2589680*Granulibacter bethesdensis CGDNIH1, complete genome75.9865 %Subject ←→ Query27.6248
NC_005085:2774370Chromobacterium violaceum ATCC 12472, complete genome75.0888 %Subject ←→ Query28.4919
NC_014306:2703544*Erwinia billingiae Eb661, complete genome75.6526 %Subject ←→ Query28.9032
CP002516:4431235Escherichia coli KO11, complete genome75.3676 %Subject ←→ Query29.0415
NC_008343:2020785*Granulibacter bethesdensis CGDNIH1, complete genome75.2114 %Subject ←→ Query29.1798
NC_008209:695269*Roseobacter denitrificans OCh 114, complete genome75.5331 %Subject ←→ Query29.2583
NC_013282:3781149Cronobacter turicensis, complete genome77.4449 %Subject ←→ Query29.5233
NC_007606:3842708Shigella dysenteriae Sd197, complete genome76.0447 %Subject ←→ Query29.5233
AC_000091:4313167Escherichia coli W3110 DNA, complete genome75.7537 %Subject ←→ Query29.5963
NC_004310:1777721*Brucella suis 1330 chromosome I, complete sequence75.1746 %Subject ←→ Query29.7817
NC_010103:1777000*Brucella canis ATCC 23365 chromosome I, complete sequence75.1685 %Subject ←→ Query30.2076
NC_004741:2593012Shigella flexneri 2a str. 2457T, complete genome77.1599 %Subject ←→ Query30.2225
NC_015968:2583721*Enterobacter asburiae LF7a chromosome, complete genome75.4167 %Subject ←→ Query30.2772
NC_000913:4307471Escherichia coli K12, complete genome76.204 %Subject ←→ Query30.3259
NC_005773:2641715Pseudomonas syringae pv. phaseolicola 1448A, complete genome75.4136 %Subject ←→ Query30.6171
NC_010468:4305105Escherichia coli ATCC 8739, complete genome76.0662 %Subject ←→ Query30.642
NC_004578:6138669Pseudomonas syringae pv. tomato str. DC3000, complete genome75.3523 %Subject ←→ Query30.698
NC_003305:1035342*Agrobacterium tumefaciens str. C58 chromosome linear, complete75.3033 %Subject ←→ Query30.7879
NC_011988:1036618*Agrobacterium vitis S4 chromosome 2, complete genome75.2328 %Subject ←→ Query30.8776
NC_010169:1599936*Brucella suis ATCC 23445 chromosome I, complete sequence75.3462 %Subject ←→ Query30.9754
NC_014837:2709813*Pantoea sp. At-9b chromosome, complete genome77.4387 %Subject ←→ Query31.1649
NC_014500:177824*Dickeya dadantii 3937 chromosome, complete genome75.4841 %Subject ←→ Query31.3108
NC_015663:4347187Enterobacter aerogenes KCTC 2190 chromosome, complete genome75.0398 %Subject ←→ Query31.3169
NC_009667:1076718*Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence76.3909 %Subject ←→ Query31.3911
NC_002655:5194804Escherichia coli O157:H7 EDL933, complete genome76.3848 %Subject ←→ Query31.6239
NC_014837:3739408*Pantoea sp. At-9b chromosome, complete genome76.6146 %Subject ←→ Query31.6269
NC_002695:5164819Escherichia coli O157:H7 str. Sakai, complete genome76.2102 %Subject ←→ Query31.63
NC_003317:190975*Brucella melitensis 16M chromosome I, complete sequence75.3554 %Subject ←→ Query31.8918
NC_015183:51500*Agrobacterium sp. H13-3 chromosome, complete genome75.0398 %Subject ←→ Query31.9053
NC_008740:4109000Marinobacter aquaeolei VT8, complete genome75.4657 %Subject ←→ Query31.9379
NC_015968:1165829Enterobacter asburiae LF7a chromosome, complete genome75.1624 %Subject ←→ Query32.0302
NC_010498:4656716Escherichia coli SMS-3-5, complete genome76.155 %Subject ←→ Query32.4781
NC_010473:4409492Escherichia coli str. K-12 substr. DH10B, complete genome75.1899 %Subject ←→ Query32.701
NC_013850:4612812*Klebsiella variicola At-22 chromosome, complete genome78.9399 %Subject ←→ Query32.7517
NC_013850:1887556*Klebsiella variicola At-22 chromosome, complete genome75.6955 %Subject ←→ Query32.9472
NC_013850:985331Klebsiella variicola At-22 chromosome, complete genome80.7138 %Subject ←→ Query32.9706
AP010958:5022196Escherichia coli O103:H2 str. 12009 DNA, complete genome76.1244 %Subject ←→ Query33.0375
NC_009648:1956070Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome75.8272 %Subject ←→ Query33.077
NC_014500:2479814*Dickeya dadantii 3937 chromosome, complete genome77.6562 %Subject ←→ Query33.1399
NC_003197:2327474Salmonella typhimurium LT2, complete genome76.057 %Subject ←→ Query33.3454
NC_012880:135508Dickeya dadantii Ech703, complete genome75.2175 %Subject ←→ Query33.437
NC_007712:1997010Sodalis glossinidius str. 'morsitans', complete genome76.2163 %Subject ←→ Query33.536
NC_008563:4656000Escherichia coli APEC O1, complete genome75.193 %Subject ←→ Query33.7245
NC_014562:1772842*Pantoea vagans C9-1 chromosome, complete genome75.1532 %Subject ←→ Query33.916
NC_013850:1198134*Klebsiella variicola At-22 chromosome, complete genome82.6256 %Subject ←→ Query33.9433
NC_014500:2589089*Dickeya dadantii 3937 chromosome, complete genome76.5165 %Subject ←→ Query34.2818
NC_011750:4719477Escherichia coli IAI39 chromosome, complete genome75.4626 %Subject ←→ Query34.2899
NC_010102:683444*Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,75.3248 %Subject ←→ Query34.5665
NC_014121:598669Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete76.5165 %Subject ←→ Query34.7003
NC_011083:2375061Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,76.4308 %Subject ←→ Query34.7993
NC_008343:1470360*Granulibacter bethesdensis CGDNIH1, complete genome75.2543 %Subject ←→ Query35.2576
NC_015566:4049000Serratia sp. AS12 chromosome, complete genome75.6036 %Subject ←→ Query35.291
NC_013850:109500*Klebsiella variicola At-22 chromosome, complete genome76.7831 %Subject ←→ Query35.2919
NC_014500:3097362*Dickeya dadantii 3937 chromosome, complete genome75.7996 %Subject ←→ Query35.3492
NC_014121:2745097*Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete75.0735 %Subject ←→ Query35.3994
NC_014121:3188928Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete76.155 %Subject ←→ Query35.6396
NC_013282:2582720Cronobacter turicensis, complete genome76.4338 %Subject ←→ Query35.8851
NC_014306:642152Erwinia billingiae Eb661, complete genome76.0631 %Subject ←→ Query36.2226
NC_009778:1717458Enterobacter sakazakii ATCC BAA-894, complete genome76.0355 %Subject ←→ Query36.5245
AC_000091:273325Escherichia coli W3110 DNA, complete genome76.7341 %Subject ←→ Query36.5733
CP002516:1196000*Escherichia coli KO11, complete genome76.5594 %Subject ←→ Query36.6914
NC_000913:272071Escherichia coli K12, complete genome76.9393 %Subject ←→ Query36.9043
CP002185:2889656*Escherichia coli W, complete genome76.0049 %Subject ←→ Query36.965
NC_014306:679888Erwinia billingiae Eb661, complete genome80.1042 %Subject ←→ Query36.9776
NC_014500:2688095Dickeya dadantii 3937 chromosome, complete genome77.3407 %Subject ←→ Query37.0489
NC_009648:3192483*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome83.0699 %Subject ←→ Query37.0832
CU928160:2785792*Escherichia coli IAI1 chromosome, complete genome76.78 %Subject ←→ Query37.1109
NC_009648:3803622Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome77.9565 %Subject ←→ Query38.2272
NC_004578:5916711Pseudomonas syringae pv. tomato str. DC3000, complete genome75.9099 %Subject ←→ Query39.1576
NC_009778:4188000Enterobacter sakazakii ATCC BAA-894, complete genome75.3278 %Subject ←→ Query43.3593
NC_013508:1491945*Edwardsiella tarda EIB202, complete genome75.095 %Subject Query50.42