Pre_GI: BLASTP Hits

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Query: NC_021182:1983456:1989738 Clostridium pasteurianum BC1, complete genome

Start: 1989738, End: 1990619, Length: 882

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021182:1761789:176965717696571770553897Clostridium pasteurianum BC1, complete genomehydrogenase (NiFe) small subunit HydA1e-154545
NC_021182:1983456:199100819910081991901894Clostridium pasteurianum BC1, complete genomehydrogenase (NiFe) small subunit HydA1e-147522
NC_021182:2013500:202827420282742029167894Clostridium pasteurianum BC1, complete genomehydrogenase (NiFe) small subunit HydA4e-131467
NC_013173:2261396:226413822641382265085948Desulfomicrobium baculatum DSM 4028, complete genomehydrogenase (NiFe) small subunit HydA2e-50199
NC_014541:1165991:1194170119417011953181149Ferrimonas balearica DSM 9799 chromosome, complete genomehydrogenase (NiFe) small subunit HydA6e-50197
NC_014314:1:2201022010230591050Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completehydrogenase (NiFe) small subunit HydA1e-49196
NC_009092:1989977:2017409201740920185451137Shewanella loihica PV-4, complete genomehydrogenase (NiFe) small subunit HydA1e-47190
NC_014216:1061265:1072576107257610738321257Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomehydrogenase (NiFe) small subunit HydA3e-46185
NC_009720:2424975:2433685243368524347971113Xanthobacter autotrophicus Py2, complete genomehydrogenase (NiFe) small subunit HydA3e-46185
NC_021184:1257722:126379612637961264764969Desulfotomaculum gibsoniae DSM 7213, complete genomehydrogenase (NiFe) small subunit HydA3e-46185
NC_013851:2610847:2629413262941326305101098Allochromatium vinosum DSM 180 chromosome, complete genomehydrogenase (NiFe) small subunit HydA7e-45181
NC_017192:1933106:1944229194422919454641236Arcobacter sp. L, complete genomeNi/Fe-hydrogenase small subunit1e-44179
NC_007973:1411714:1414328141432814154221095Ralstonia metallidurans CH34 chromosome 1, complete sequencehydrogenase (NiFe) small subunit (hydA)1e-43177
NC_011830:2940500:2942816294281629439041089Desulfitobacterium hafniense DCB-2, complete genomehydrogenase (NiFe) small subunit HydA3e-43176
NC_011059:921690:9356989356989367921095Prosthecochloris aestuarii DSM 271, complete genomehydrogenase (NiFe) small subunit HydA2e-43176
NC_015557:30622:4921349213502831071Hydrogenobaculum sp. 3684 chromosome, complete genomehydrogenase (NiFe) small subunit HydA1e-42173
NC_008687:256692:2831972831972842821086Paracoccus denitrificans PD1222 chromosome 2, complete sequencehydrogenase (NiFe) small subunit HydA2e-42172
NC_011353:1195179:1216292121629212174101119Escherichia coli O157:H7 str. EC4115 chromosome, complete genomenickel-dependent hydrogenase 1, small subunit2e-42172
NC_014365:1094516:111291211129121113841930Desulfarculus baarsii DSM 2075 chromosome, complete genomehydrogenase (NiFe) small subunit HydA4e-42172
NC_018515:937994:9562149562149572901077Desulfosporosinus meridiei DSM 13257 chromosome, complete genomehydrogenase (NiFe) small subunit HydA8e-42171
NC_011745:1055354:1075360107536010764781119Escherichia coli ED1a chromosome, complete genomehydrogenase 1, small subunit1e-41170
NC_015761:1488807:1491306149130614924091104Salmonella bongori NCTC 12419, complete genomeuptake hydrogenase small subunit3e-41169
NC_016856:1621279:1623778162377816248811104Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative hydrogenase-1 small subunit3e-41169
NC_003197:1611302:1613801161380116149041104Salmonella typhimurium LT2, complete genomeputative hydrogenase-1 small subunit3e-41169
NC_019940:3660754:3664470366447036655671098Thioflavicoccus mobilis 8321 chromosome, complete genomehydrogenase (NiFe) small subunit HydA4e-41168
NC_010067:1116148:1119281111928111203991119Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-41168
NC_004463:1872537:1888916188891618900071092Bradyrhizobium japonicum USDA 110, complete genomeuptake hydrogenase small subunit precursor homolog3e-41168
NC_017249:8358438:8364483836448383655741092Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-41168
NC_013943:2610902:2615995261599526171011107Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomehydrogenase (NiFe) small subunit HydA9e-41167
NC_003198:1463253:1480110148011014812131104Salmonella enterica subsp. enterica serovar Typhi str. CT18,uptake hydrogenase small subunit1e-40167
NC_015499:352934:3605103605103615801071Thermodesulfobium narugense DSM 14796 chromosome, complete genomehydrogenase (NiFe) small subunit HydA4e-39161
NC_013851:2317091:2337830233783023389331104Allochromatium vinosum DSM 180 chromosome, complete genomehydrogenase (NiFe) small subunit HydA6e-39161
NC_010278:1467146:1484733148473314858751143Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hydrogenase 2 small subunit1e-38160
NC_011060:1947795:1951538195153819526261089Pelodictyon phaeoclathratiforme BU-1, complete genomehydrogenase (NiFe) small subunit HydA9e-39160
NC_012483:3529895:3533668353366835348101143Acidobacterium capsulatum ATCC 51196, complete genomenickel-dependent hydrogenase, small subunit5e-38158
NC_011740:2986514:3006959300695930080771119Escherichia fergusonii ATCC 35469, complete genomehydrogenase 2, small subunit5e-38158
NC_015557:1333158:133315813331581334120963Hydrogenobaculum sp. 3684 chromosome, complete genomehydrogenase (NiFe) small subunit HydA7e-38157
NC_010067:1414000:143387114338711434863993Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-37157
NC_009921:4035225:4034026403402640352281203Frankia sp. EAN1pec, complete genomehydrogenase (NiFe) small subunit HydA5e-37155
NC_018515:3411276:3416846341684634179461101Desulfosporosinus meridiei DSM 13257 chromosome, complete genomehydrogenase (NiFe) small subunit HydA2e-37155
NC_020411:1333352:133335213333521334314963Hydrogenobaculum sp. HO, complete genomehydrogenase (NiFe) small subunit HydA7e-37154
NC_014166:33138:3444134441368642424Arcobacter nitrofigilis DSM 7299 chromosome, complete genomehydrogenase (NiFe) small subunit HydA5e-35148
NC_013741:838243:8451968451968462541059Archaeoglobus profundus DSM 5631, complete genomehydrogenase (NiFe) small subunit HydA7e-35147
NC_003901:2533000:2571365257136525725251161Methanosarcina mazei Go1, complete genomeF420-nonreducing hydrogenase II precursor2e-31136
NC_014216:608740:610233610233611150918Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomehydrogenase (NiFe) small subunit HydA3e-30132
NC_017192:1933106:194708019470801947970891Arcobacter sp. L, complete genomeNi/Fe-dependent hydrogenase small subunit3e-26119
NC_008340:2272692:2283325228332522843441020Alkalilimnicola ehrlichei MLHE-1, complete genomeNADH ubiquinone oxidoreductase, 20 kDa subunit3e-25115
NC_003272:784437:795536795536796498963Nostoc sp. PCC 7120, complete genome[NiFe] uptake hydrogenase small subunit1e-24113
NC_007413:5742406:575191757519175752879963Anabaena variabilis ATCC 29413, complete genomeNADH ubiquinone oxidoreductase, 20 kDa subunit1e-24113
NC_008687:256692:278284278284279273990Paracoccus denitrificans PD1222 chromosome 2, complete sequenceNADH ubiquinone oxidoreductase, 20 kDa subunit4e-24112
NC_015312:6717973:672773567277356728706972Pseudonocardia dioxanivorans CB1190 chromosome, complete genomecytochrome-c3 hydrogenase5e-24111
NC_008595:2687245:2716404271640427174591056Mycobacterium avium 104, complete genomeNADH ubiquinone oxidoreductase, 20 kda subunit1e-1997.4
NC_015931:71361:7220772207737121506Pyrolobus fumarii 1A, complete genomeNiFe hydrogenase2e-0963.2