Pre_GI: BLASTP Hits

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Query: NC_015848:1708176:1714578 Mycobacterium canettii CIPT 140010059, complete genome

Start: 1714578, End: 1714976, Length: 399

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002755:1684161:169049116904911690961471Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein2e-64243
NC_008769:1709078:171548017154801715878399Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein2e-64243
NC_009565:1688642:169504416950441695442399Mycobacterium tuberculosis F11, complete genomehypothetical protein2e-64243
NC_000962:1684005:169040716904071690805399Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein2e-64243
NC_002945:1680751:168715316871531687551399Mycobacterium bovis AF2122/97, complete genomehypothetical protein2e-64243
NC_012207:1681971:168837316883731688771399Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein2e-64243
NC_009525:1685522:169192416919241692322399Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein2e-64243
NC_012943:2707677:272266127226612723059399Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein2e-64243
NC_016768:2704350:271933427193342719732399Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein2e-64243
NC_016804:1679357:168575916857591686157399Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein2e-64243
NC_017026:1686500:169142316914231691821399Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein2e-64243
NC_019950:1689910:169374916937491694144396Mycobacterium canettii CIPT 140060008 complete genome1e-61234