Pre_GI: BLASTP Hits

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Query: NC_014323:961825:970186 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 970186, End: 971163, Length: 978

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015856:1182974:1197577119757711985781002Collimonas fungivorans Ter331 chromosome, complete genomephage integrase5e-148523
NC_010002:2110953:2110953211095321119541002Delftia acidovorans SPH-1, complete genomeintegrase family protein1e-96353
NC_014910:1708045:1711662171166217126751014Alicycliphilus denitrificans BC chromosome, complete genomeintegrase family protein7e-77287
NC_011206:1233985:123407912340791235074996Acidithiobacillus ferrooxidans ATCC 53993, complete genomeintegrase family protein4e-21102
NC_014355:288000:2962442962442972841041Candidatus Nitrospira defluvii, complete genomeputative phage integrase4e-2099
NC_015563:3786192:380114638011463801531386Delftia sp. Cs1-4 chromosome, complete genome7e-1788.2
NC_009659:543000:548709548709549695987Janthinobacterium sp. Marseille chromosome, complete genomephage integrase site specific recombinase1e-1687.4
NC_015259:485015:5473145473145485251212Polymorphum gilvum SL003B-26A1 chromosome, complete genomeIntegrase family protein4e-1685.9
NC_015259:673662:7011397011397022691131Polymorphum gilvum SL003B-26A1 chromosome, complete genomeIntegrase family protein6e-1685.1
NC_015850:1006980:1008592100859210096021011Acidithiobacillus caldus SM-1 chromosome, complete genomeputative phage integrase5e-1582
NC_008789:350650:3635873635873647261140Halorhodospira halophila SL1, complete genomephage integrase family protein7e-1581.6
NC_015856:3170771:319264131926413192829189Collimonas fungivorans Ter331 chromosome, complete genomephage integrase1e-1480.9
NC_009943:748788:7553137553137565061194Candidatus Desulfococcus oleovorans Hxd3, complete genomeintegrase family protein3e-1479.3
NC_011745:3443371:3443889344388934450131125Escherichia coli ED1a chromosome, complete genomeShufflon-specific DNA recombinase4e-1479
NC_010501:4379920:4392912439291243939341023Pseudomonas putida W619, complete genomeintegrase family protein7e-1478.2
NC_012108:1973861:1990732199073219918861155Desulfobacterium autotrophicum HRM2, complete genometyrosine recombinase XerD8e-1478.2
NC_006350:3957454:396679739667973967651855Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative bacteriophage integrase1e-1377.8
NC_015064:2341152:2360406236040623614641059Acidobacterium sp. MP5ACTX9 chromosome, complete genomeintegrase family protein2e-1377
NC_014355:243543:2579012579012590221122Candidatus Nitrospira defluvii, complete genomephage integrase2e-1376.6
NC_014355:1223243:1233478123347812345481071Candidatus Nitrospira defluvii, complete genomeputative integrase2e-1376.6
NC_012880:3529017:3548469354846935495931125Dickeya dadantii Ech703, complete genomeintegrase family protein7e-1375.1
NC_016631:4113794:4148964414896441500041041Granulicella mallensis MP5ACTX8 chromosome, complete genomeintegrase family protein8e-1374.7
NC_007759:2179000:2183062218306221841561095Syntrophus aciditrophicus SB, complete genomephage integrase family protein1e-1274.3
NC_008702:2039462:2046178204617820472541077Azoarcus sp. BH72, complete genomesite-specific recombinase, phage integrase family2e-1273.9
NC_011757:5693584:5696052569605256971161065Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein3e-1272.8
NC_015458:2338437:2340983234098323420711089Pusillimonas sp. T7-7 chromosome, complete genomesite-specific recombinase, phage integrase family4e-1272.8
NC_016602:3122700:3133060313306031342471188Vibrio furnissii NCTC 11218 chromosome 1, complete sequencephage integrase family protein7e-1271.6
NC_008609:3921113:3938275393827539394831209Pelobacter propionicus DSM 2379, complete genomephage integrase family protein1e-1170.9
NC_007651:3719191:373247537324753732954480Burkholderia thailandensis E264 chromosome I, complete sequencesite-specific recombinase, phage integrase family2e-1170.5
NC_021184:4456904:446146844614684462346879Desulfotomaculum gibsoniae DSM 7213, complete genomesite-specific recombinase XerD2e-1170.1
NC_013722:3117442:3131487313148731325811095Xanthomonas albilineans, complete genomeputative shufflon-specific dna recombinase protein2e-1170.1
NC_014972:1126426:1145414114541411465951182Desulfobulbus propionicus DSM 2032 chromosome, complete genomeintegrase family protein2e-1170.1
NC_008380:4968492:497566649756664976619954Rhizobium leguminosarum bv. viciae 3841, complete genomeputative shufflon-specific DNA recombinase2e-1170.1
NC_008260:2340824:2352446235244623535491104Alcanivorax borkumensis SK2, complete genomeshufflon-specific DNA recombinase4e-1168.9
NC_020911:4465500:4465774446577444670331260Octadecabacter antarcticus 307, complete genomeDNA integration/recombination/inversion protein5e-1168.9
NC_014972:1621850:163002716300271630962936Desulfobulbus propionicus DSM 2032 chromosome, complete genomeintegrase family protein7e-1168.6
NC_007626:3996000:4009811400981140109021092Magnetospirillum magneticum AMB-1, complete genomeIntegrase6e-1168.6
NC_015681:1558873:1561014156101415622041191Thermodesulfatator indicus DSM 15286 chromosome, complete genomeintegrase family protein6e-1168.6
NC_015633:2801321:2823882282388228250841203Vibrio anguillarum 775 chromosome chromosome I, complete sequenceDNA integration/recombination/inversion protein5e-1168.6
NC_012796:1600600:1605716160571616067561041Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase1e-1067.8
NC_004547:611178:6162356162356173621128Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeshufflon-specific DNA recombinase2e-1067
NC_008687:302450:3053223053223065031182Paracoccus denitrificans PD1222 chromosome 2, complete sequencephage integrase family protein2e-1067
NC_007519:3355768:3362885336288533641081224Desulfovibrio alaskensis G20 chromosome, complete genomephage integrase family site specific recombinase4e-1065.9
NC_011958:976500:9867399867399880431305Rhodobacter sphaeroides KD131 chromosome 2, complete genomePhage integrase5e-1065.5
NC_015381:429940:4389684389684400111044Burkholderia gladioli BSR3 chromosome 1, complete sequencephage integrase4e-1065.5
NC_008060:2913671:2934382293438229354251044Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencephage integrase6e-1065.1
NC_008542:483761:4912204912204922631044Burkholderia cenocepacia HI2424 chromosome 1, complete sequencephage integrase family protein6e-1065.1
NC_007626:959684:9702309702309713091080Magnetospirillum magneticum AMB-1, complete genomeIntegrase1e-0964.3
NC_008825:564392:5822395822395832431005Methylibium petroleiphilum PM1, complete genomehypothetical protein1e-0963.9
NC_015435:537483:554461554461555315855Metallosphaera cuprina Ar-4 chromosome, complete genomephage integrase family protein2e-0963.9
NC_009076:3876733:388817438881743888692519Burkholderia pseudomallei 1106a chromosome I, complete sequencesite-specific recombinase, phage integrase family2e-0963.9
NC_011768:5900500:5905877590587759071061230Desulfatibacillum alkenivorans AK-01, complete genomeintegrase family protein3e-0963.2
NC_015388:1020747:102930310293031030148846Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeintegrase family protein2e-0963.2
NC_010682:3313944:3349996334999633510511056Ralstonia pickettii 12J chromosome 1, complete sequenceintegrase family protein2e-0963.2
NC_015580:141379:1621711621711633671197Novosphingobium sp. PP1Y, complete genomephage integrase3e-0962.8
NC_012856:3000839:3011439301143930124941056Ralstonia pickettii 12D chromosome 1, complete genomeintegrase family protein3e-0962.8
NC_017249:4365935:4371805437180543730791275Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein4e-0962.4
NC_015379:6226661:6232535623253562336681134Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative phage integrase4e-0962.4
NC_008043:615049:6341046341046353391236Silicibacter sp. TM1040 mega plasmid, complete sequencephage integrase7e-0961.6
NC_012796:2757500:2757717275771727589461230Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase7e-0961.6
NC_015519:2489728:250341725034172504274858Tepidanaerobacter sp. Re1 chromosome, complete genomeintegrase family protein1e-0861.2
NC_009952:366959:3847653847653859581194Dinoroseobacter shibae DFL 12, complete genomephage integrase family protein1e-0860.8
NC_016048:2055199:2072316207231620733231008Oscillibacter valericigenes Sjm18-20, complete genometyrosine recombinase XerC1e-0860.8
NC_015942:403296:4146714146714157651095Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase family protein1e-0860.8
NC_011985:1831961:1844038184403818453331296Agrobacterium radiobacter K84 chromosome 1, complete genometyrosine site-specific integrase/recombinase protein1e-0860.5
NC_021184:4456904:446470544647054465562858Desulfotomaculum gibsoniae DSM 7213, complete genomesite-specific recombinase XerD2e-0860.1
NC_012108:2037429:2046862204686220479591098Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein2e-0860.1
NC_010793:1922000:1940379194037919415181140Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase3e-0859.7
NC_008781:4178115:418438241843824185365984Polaromonas naphthalenivorans CJ2, complete genomephage integrase family protein3e-0859.7
NC_004578:568236:5847805847805860211242Pseudomonas syringae pv. tomato str. DC3000, complete genomesite-specific recombinase, phage integrase family5e-0858.9
NC_011989:594353:6107606107606117911032Agrobacterium vitis S4 chromosome 1, complete sequenceIntegrase4e-0858.9
NC_004463:925140:940715940715941704990Bradyrhizobium japonicum USDA 110, complete genomeprobable site-specific integrase/recombinase6e-0858.5
NC_007722:168937:175211175211176203993Erythrobacter litoralis HTCC2594, complete genomesite-specific recombinase, phage integrase family protein6e-0858.5
NC_008554:4839116:4849957484995748512041248Syntrophobacter fumaroxidans MPOB, complete genomephage integrase family protein7e-0858.2
NC_014010:1020488:1055855105585510572671413Candidatus Puniceispirillum marinum IMCC1322 chromosome, completehypothetical protein1e-0757.8
NC_014391:16188:1618816188173391152Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeintegrase family protein1e-0757.8
NC_008687:256692:2735792735792747331155Paracoccus denitrificans PD1222 chromosome 2, complete sequencephage integrase family protein2e-0757
NC_005139:1784000:1822239182223918234471209Vibrio vulnificus YJ016 chromosome I, complete sequenceintegrase2e-0757
NC_017325:1488841:1500241150024115013261086Sinorhizobium meliloti SM11 chromosome, complete genomephage integrase family protein2e-0757
NC_016587:523215:5480775480775494561380Azospirillum lipoferum 4B plasmid AZO_p4, complete sequenceputative phage integrase2e-0756.6
NC_014973:3290545:3300347330034733013691023Geobacter sp. M18 chromosome, complete genomeintegrase family protein2e-0756.6
NC_009615:4563831:4576630457663045777811152Parabacteroides distasonis ATCC 8503 chromosome, complete genomesite-specific recombinase2e-0756.6
NC_008751:2988235:2994488299448829957411254Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomephage integrase family protein3e-0756.6
NC_015731:2148517:2150716215071621518041089Nitrosomonas sp. Is79A3 chromosome, complete genomeintegrase family protein3e-0756.2
NC_010814:1441327:1473385147338514746501266Geobacter lovleyi SZ, complete genomeintegrase family protein3e-0756.2
NC_012918:1697860:1721959172195917229631005Geobacter sp. M21 chromosome, complete genomeintegrase family protein3e-0756.2
NC_009052:4335754:4351610435161043529651356Shewanella baltica OS155, complete genomephage integrase family protein3e-0756.2
NC_014910:3727887:3734725373472537357771053Alicycliphilus denitrificans BC chromosome, complete genomeintegrase family protein3e-0756.2
NC_014960:2371989:240852724085272409405879Anaerolinea thermophila UNI-1, complete genomeputative site-specific recombinase4e-0755.8
NC_015164:493159:5400695400695413671299Bacteroides salanitronis DSM 18170 chromosome, complete genomeintegrase family protein5e-0755.5
NC_009074:3791232:380235838023583802657300Burkholderia pseudomallei 668 chromosome I, complete sequencesite-specific recombinase, phage integrase family5e-0755.5
NC_007722:168937:1762001762001773691170Erythrobacter litoralis HTCC2594, complete genomesite-specific recombinase, phage integrase family protein6e-0755.5
NC_004459:2443000:2501649250164925028571209Vibrio vulnificus CMCP6 chromosome I, complete sequenceIntegrase6e-0755.5
NC_014217:800406:808989808989809348360Starkeya novella DSM 506 chromosome, complete genomehypothetical protein6e-0755.1
NC_004461:921364:929825929825930715891Staphylococcus epidermidis ATCC 12228, complete genomexerC protein1e-0654.7
NC_013943:2705983:2705983270598327071761194Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeintegrase family protein1e-0654.7
NC_014034:1036652:1041679104167910429081230Rhodobacter capsulatus SB1003 chromosome, complete genomephage integrase1e-0654.3
NC_008011:213386:2187032187032198691167Lawsonia intracellularis PHE/MN1-00, complete genomeprophage DLP12 integrase1e-0654.3
NC_010511:3106418:3119432311943231204481017Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein1e-0654.3
NC_014355:243543:260538260538261491954Candidatus Nitrospira defluvii, complete genometyrosine recombinase xerC2e-0653.9
NC_009253:3017280:3019218301921830203211104Desulfotomaculum reducens MI-1 chromosome, complete genomephage integrase family protein2e-0653.9
NC_007168:1705763:171536717153671716260894Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein2e-0653.9
NC_012988:4633930:4641261464126146422741014Methylobacterium extorquens DM4, complete genomeintegrase1e-0653.9
NC_015733:1943385:1947826194782619489471122Pseudomonas putida S16 chromosome, complete genomechorismate mutase family protein2e-0653.5
NC_021184:4493440:451747245174724518329858Desulfotomaculum gibsoniae DSM 7213, complete genomesite-specific recombinase XerD2e-0653.5
NC_015656:1592021:159641615964161596859444Frankia symbiont of Datisca glomerata chromosome, complete genome2e-0653.5
NC_009052:4335754:4352962435296243540921131Shewanella baltica OS155, complete genomephage integrase family protein2e-0653.5
NC_015740:3486226:350299735029973503659663Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeintegrase2e-0653.1
NC_020304:752012:7746467746467757581113Desulfocapsa sulfexigens DSM 10523, complete genomesite-specific recombinase XerD2e-0653.1
NC_008314:2686851:2690066269006626911061041Ralstonia eutropha H16 chromosome 2, complete sequencephage integrase family protein3e-0653.1
NC_021184:148000:156671156671157588918Desulfotomaculum gibsoniae DSM 7213, complete genomesite-specific recombinase XerD4e-0652.8
NC_015593:797675:8029208029208041221203Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeintegrase family protein4e-0652.8
NC_009429:622359:6440406440406451941155Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, completehypothetical protein3e-0652.8
NC_012779:2127542:215020621502062151093888Edwardsiella ictaluri 93-146, complete genomeintegrase family protein3e-0652.8
NC_012917:2971702:2989228298922829902351008Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeintegrase family protein3e-0652.8
NC_016818:1605918:161022516102251611211987Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completesite-specific recombinase XerD3e-0652.8
NC_017047:1551836:155616615561661557152987Rahnella aquatilis HX2 chromosome, complete genomeintegrase family protein3e-0652.8
NC_009077:4671417:4676733467673346780071275Mycobacterium sp. JLS, complete genomephage integrase family protein3e-0652.8
NC_015730:3693391:371579737157973716258462Roseobacter litoralis Och 149 chromosome, complete genome5e-0652.4
NC_004129:2201780:2207060220706022082021143Pseudomonas fluorescens Pf-5, complete genomesite-specific recombinase, phage integrase family4e-0652.4
NC_008358:263458:2825832825832836441062Hyphomonas neptunium ATCC 15444, complete genomesite-specific recombinase, phage integrase family4e-0652.4
NC_015422:3581848:3595358359535835966021245Alicycliphilus denitrificans K601 chromosome, complete genomeintegrase family protein4e-0652.4
NC_015410:1202370:120237012023701203362993Pseudomonas mendocina NK-01 chromosome, complete genomeintegrase4e-0652.4
NC_010172:4185904:4194558419455841955621005Methylobacterium extorquens PA1, complete genomeintegrase family protein7e-0652
NC_014217:2760898:2760898276089827622741377Starkeya novella DSM 506 chromosome, complete genomeintegrase family protein6e-0652
NC_015593:2103815:2134060213406021352591200Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeintegrase family protein5e-0652
NC_008686:1383891:1388943138894313899981056Paracoccus denitrificans PD1222 chromosome 1, complete sequencephage integrase family protein5e-0652
NC_007626:1863747:187427318742731875064792Magnetospirillum magneticum AMB-1, complete genomeIntegrase5e-0652
NC_012622:1646000:166542116654211666296876Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeintegrase family protein9e-0651.6
NC_020908:4263552:426684742668474267752906Octadecabacter arcticus 238, complete genomeintegrase/recombinase8e-0651.6
NC_020908:2466446:247991324799132480827915Octadecabacter arcticus 238, complete genomeintegrase/recombinase8e-0651.6
NC_015593:2553500:2557151255715125582871137Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeintegrase family protein8e-0651.6
NC_013235:1354443:1359930135993013617831854Nakamurella multipartita DSM 44233, complete genomeintegrase family protein8e-0651.6
NC_014972:480355:4934964934964946591164Desulfobulbus propionicus DSM 2032 chromosome, complete genomeintegrase family protein8e-0651.6
NC_009656:5185704:5191294519129451924091116Pseudomonas aeruginosa PA7 chromosome, complete genomeprophage CP-933T integrase8e-0651.6
NC_008009:1408000:1411109141110914124731365Acidobacteria bacterium Ellin345, complete genomephage integrase8e-0651.6
NC_015381:3457784:3491685349168534928421158Burkholderia gladioli BSR3 chromosome 1, complete sequencephage integrase7e-0651.6
NC_015593:2841856:2849928284992828509651038Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeintegrase family protein9e-0651.2
NC_010084:534937:541878541878542864987Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase family protein9e-0651.2
NC_014414:1104386:1104386110438611056511266Parvularcula bermudensis HTCC2503 chromosome, complete genomePhage integrase9e-0651.2
NC_008278:1845000:186443218644321864845414Frankia alni ACN14a, complete genomePutative integrase (partial)1e-0551.2