Pre_GI: BLASTP Hits

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Query: NC_013716:3512950:3550474 Citrobacter rodentium ICC168, complete genome

Start: 3550474, End: 3551550, Length: 1077

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009832:622969:6277976277976288731077Serratia proteamaculans 568, complete genomefilamentation induced by cAMP protein Fic0700
NC_014840:76232:8651586515875911077Pantoea sp. At-9b plasmid pPAT9B03, complete sequencefilamentation induced by cAMP protein Fic0653
NC_004347:4441110:4442851444285144439691119Shewanella oneidensis MR-1, complete genomehypothetical protein1e-130466
NC_008800:4488112:4499404449940445005131110Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein6e-130464
NC_018868:1352000:1355293135529313563991107Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomefilamentation induced by cAMP protein fic8e-125447
NC_015731:3658956:3664325366432536654401116Nitrosomonas sp. Is79A3 chromosome, complete genomefilamentation induced by cAMP protein Fic1e-120433
NC_020541:2551539:2566145256614525672691125Rhodanobacter sp. 2APBS1, complete genomehypothetical protein1e-115416
NC_011901:625712:6578746578746589891116Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein2e-113408
NC_021064:1705961:1722699172269917238891191Propionibacterium avidum 44067, complete genomehypothetical protein4e-94345
NC_014364:394899:4322194322194333041086Spirochaeta smaragdinae DSM 11293 chromosome, complete genomefilamentation induced by cAMP protein Fic2e-86319
NC_015554:1215401:1235142123514212362211080Alteromonas sp. SN2 chromosome, complete genomefilamentation induced by cAMP protein Fic2e-78293
NC_008309:190550:2170202170202181411122Haemophilus somnus 129PT, complete genomehypothetical protein7e-76284
NC_017045:328031:3344673344673355281062Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,filamentation induced by camp protein fic4e-74278
NC_014738:167707:1741431741431752041062Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,filamentation induced by camp protein fic4e-74278
NC_020125:1545578:1557224155722415582851062Riemerella anatipestifer RA-CH-2, complete genomehypothetical protein4e-74278
NC_015138:5342473:5349315534931553503971083Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completefilamentation induced by cAMP protein Fic1e-73276
NC_015577:3589884:3612966361296636140541089Treponema azotonutricium ZAS-9 chromosome, complete genomefilamentation induced by cAMP protein Fic1e-69263
NC_013730:5538323:5544324554432455454571134Spirosoma linguale DSM 74, complete genomefilamentation induced by cAMP protein Fic2e-67256
NC_013061:4286913:4300953430095343020741122Pedobacter heparinus DSM 2366, complete genomefilamentation induced by cAMP protein Fic6e-64244
NC_009707:1685381:1685381168538116864511071Campylobacter jejuni subsp. doylei 269.97 chromosome, completeputative MloA protein1e-63243
NC_009714:1329573:1345833134583313469121080Campylobacter hominis ATCC BAA-381, complete genomeMloA2e-61236
NC_012731:560199:576695576695577066372Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomefilamentation induced by cAMP protein Fic1e-53210
NC_007481:3167434:318181331818133182559747Pseudoalteromonas haloplanktis TAC125 chromosome I, completehypothetical protein5e-43175
NC_009455:173374:1963541963541975081155Dehalococcoides sp. BAV1 chromosome, complete genomefilamentation induced by cAMP protein fic6e-34145
NC_002939:173833:1838831838831850491167Geobacter sulfurreducens PCA, complete genomeFic family protein6e-34145
NC_009051:2240480:2251990225199022531441155Methanoculleus marisnigri JR1, complete genomefilamentation induced by cAMP protein Fic3e-33142
NC_017059:1972895:1976297197629719774811185Rhodospirillum photometricum DSM 122, complete genomeFilamentation induced by cAMP protein Fic6e-33141
NC_014836:2620871:2626075262607526272291155Desulfurispirillum indicum S5 chromosome, complete genomefilamentation induced by cAMP protein Fic1e-32140
NC_019902:2306961:2306961230696123080191059Thioalkalivibrio nitratireducens DSM 14787, complete genomefilamentation induced by cAMP protein Fic3e-32139
NC_018867:1837941:1863991186399118651421152Dehalobacter sp. CF chromosome, complete genomeMloA2e-31137
NC_009051:1455183:1460449146044914615581110Methanoculleus marisnigri JR1, complete genomefilamentation induced by cAMP protein Fic3e-31136
NC_013959:2449315:2469457246945724705811125Sideroxydans lithotrophicus ES-1 chromosome, complete genomefilamentation induced by cAMP protein Fic2e-30134
NC_011883:2826000:2838186283818628393011116Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,filamentation induced by cAMP protein Fic2e-30133
NC_006347:4378684:4393520439352043946531134Bacteroides fragilis YCH46, complete genomehypothetical protein3e-30132
NC_016593:762216:7928967928967939901095Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetranscription regulator containing filamentation induced by cAMP family (Fic) domain and ArsR subfamily HTH domain7e-30131
NC_014206:2941575:2941575294157529426691095Geobacillus sp. C56-T3 chromosome, complete genomefilamentation induced by cAMP protein Fic8e-30131
NC_012969:2476318:2486685248668524878211137Methylovorus glucosetrophus SIP3-4 chromosome, complete genomefilamentation induced by cAMP protein Fic8e-30131
NC_009523:341347:3480283480283491911164Roseiflexus sp. RS-1 chromosome, complete genomefilamentation induced by cAMP protein fic2e-29130
NC_003064:22535:3954739547407281182Agrobacterium tumefaciens str. C58 plasmid AT, complete sequencehypothetical protein9e-29127
NC_003306:22228:3924039240404211182Agrobacterium tumefaciens str. C58 plasmid AT, complete sequencehypothetical protein9e-29127
NC_012780:189949:1934311934311945761146Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequencehypothetical protein1e-28127
NC_020411:90538:9632996329974411113Hydrogenobaculum sp. HO, complete genomefilamentation induced by cAMP protein Fic9e-28124
NC_015587:90539:9633096330974421113Hydrogenobaculum sp. SHO chromosome, complete genomefilamentation induced by cAMP protein Fic9e-28124
NC_015557:90503:9629496294974061113Hydrogenobaculum sp. 3684 chromosome, complete genomefilamentation induced by cAMP protein Fic9e-28124
NC_014844:511552:5216845216845228621179Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomefilamentation induced by cAMP protein Fic2e-26120
NC_016610:1138995:1143646114364611447671122Tannerella forsythia ATCC 43037 chromosome, complete genometoxin-antitoxin system, toxin component, Fic family2e-26120
NC_018750:4333064:4343077434307743442551179Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein2e-26120
NC_019962:2736815:2751080275108027522371158Natrinema pellirubrum DSM 15624, complete genomehypothetical protein1e-26120
NC_014814:483444:4873754873754885591185Mycobacterium sp. Spyr1 chromosome, complete genomehypothetical protein6e-26118
NC_017271:64293:6701067010681581149Xanthomonas campestris pv. raphani 756C chromosome, completefilamentation induced by cAMP protein fic7e-25115
NC_007086:71493:7149371493726411149Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein6e-25115
NC_003902:71494:7149471494726421149Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein6e-25115
NC_002608:268000:2806762806762819501275Halobacterium sp. NRC-1 plasmid pNRC200, complete sequencehypothetical protein7e-25114
NC_014365:2810405:2820776282077628219421167Desulfarculus baarsii DSM 2075 chromosome, complete genomefilamentation induced by cAMP protein Fic5e-24112
NC_010688:69458:721757217572858684Xanthomonas campestris pv. campestris, complete genome7e-24111
NC_019907:539749:5403915403915415211131Liberibacter crescens BT-1 chromosome, complete genomehypothetical protein1e-23110
NC_013093:1213908:1223787122378712251031317Actinosynnema mirum DSM 43827, complete genomefilamentation induced by cAMP protein Fic2e-23109
NC_013966:399215:4086624086624098221161Haloferax volcanii DS2 plasmid pHV4, complete sequenceFic protein family, putative4e-21102
NC_013158:1905643:1910894191089419120781185Halorhabdus utahensis DSM 12940, complete genomefilamentation induced by cAMP protein Fic7e-21101
NC_014297:1100997:110942711094271110035609Halalkalicoccus jeotgali B3 chromosome, complete genomefilamentation induced by cAMP protein Fic1e-1894.4
NC_004606:1107500:1109253110925311104431191Streptococcus pyogenes SSI-1, complete genomehypothetical protein4e-1789.4
NC_011059:2478075:248367824836782484103426Prosthecochloris aestuarii DSM 271, complete genomefilamentation induced by cAMP protein Fic3e-1686.3
NC_014632:1112733:1114065111406511152551191Ilyobacter polytropus DSM 2926 chromosome, complete genomefilamentation induced by cAMP protein fic4e-1685.9
NC_015730:1107840:1124793112479311258451053Roseobacter litoralis Och 149 chromosome, complete genomehypothetical protein3e-1479.7
NC_008347:2515921:2525126252512625262561131Maricaulis maris MCS10, complete genomefilamentation induced by cAMP protein Fic5e-1375.9
NC_008618:1729739:1752779175277917540231245Bifidobacterium adolescentis ATCC 15703, complete genomebacterial regulatory protein8e-1374.7
NC_007481:3167434:318154731815473181870324Pseudoalteromonas haloplanktis TAC125 chromosome I, completehypothetical protein1e-1274.3
NC_014365:2888897:2890549289054928916761128Desulfarculus baarsii DSM 2075 chromosome, complete genomefilamentation induced by cAMP protein Fic1e-1170.9
NC_012691:2476223:249222524922252493220996Tolumonas auensis DSM 9187, complete genomefilamentation induced by cAMP protein Fic2e-1170.1
NC_008554:4699577:4715718471571847167221005Syntrophobacter fumaroxidans MPOB, complete genomefilamentation induced by cAMP protein Fic5e-1168.9
NC_008609:112340:1126921126921137411050Pelobacter propionicus DSM 2379, complete genomefilamentation induced by cAMP protein Fic6e-1168.9
NC_009524:861500:8647308647308658511122Psychrobacter sp. PRwf-1 chromosome, complete genomefilamentation induced by cAMP protein fic7e-1168.6
NC_015737:1976000:198475419847541985743990Clostridium sp. SY8519, complete genomehypothetical protein7e-1168.6
NC_009997:415808:4158084158084169351128Shewanella baltica OS195, complete genomefilamentation induced by cAMP protein Fic2e-1067.4
NC_016901:414670:4146704146704157971128Shewanella baltica OS678 chromosome, complete genomefilamentation induced by cAMP protein fic2e-1067.4
NC_008786:4579490:4582999458299945840541056Verminephrobacter eiseniae EF01-2, complete genomefilamentation induced by cAMP protein Fic2e-1067.4
NC_013174:23421:5204852048533071260Jonesia denitrificans DSM 20603, complete genomefilamentation induced by cAMP protein Fic1e-1067.4
NC_008463:632869:6387376387376398581122Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein2e-1067
NC_013061:1052957:1057359105735910584021044Pedobacter heparinus DSM 2366, complete genomefilamentation induced by cAMP protein Fic2e-1067
NC_016628:133841:1493281493281504401113Vibrio furnissii NCTC 11218 chromosome 2, complete sequencefilamentation induced by cAMP protein fic4e-1065.9
NC_015588:939037:9608299608299620251197Isoptericola variabilis 225 chromosome, complete genomefilamentation induced by cAMP protein Fic4e-1065.9
NC_014216:2127370:2144868214486821459681101Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomefilamentation induced by cAMP protein Fic5e-1065.9
NC_015577:3113907:3120238312023831213561119Treponema azotonutricium ZAS-9 chromosome, complete genomefilamentation induced by cAMP protein Fic7e-1065.5
NC_008609:1976403:199746219974621998448987Pelobacter propionicus DSM 2379, complete genometranscriptional regulator, Fis family6e-1065.5
NC_002935:2059672:207661420766142077324711Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein6e-1065.5
NC_012918:928903:9782049782049793281125Geobacter sp. M21 chromosome, complete genomefilamentation induced by cAMP protein fic5e-1065.5
NC_013895:117429:1316971316971327611065Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completeFic family protein8e-1065.1
NC_016802:2035723:205424820542482054853606Corynebacterium diphtheriae HC02 chromosome, complete genomefilamentation induced by cAMP protein fic8e-1065.1
NC_004578:568236:5711965711965723261131Pseudomonas syringae pv. tomato str. DC3000, complete genomeFic family protein7e-1065.1
NC_008463:2467219:247927924792792480274996Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein7e-1065.1
NC_009937:4392108:4408013440801344091161104Azorhizobium caulinodans ORS 571, complete genomeconserved hypothetical protein9e-1064.7
NC_006677:1596560:1662771166277116639041134Gluconobacter oxydans 621H, complete genomehypothetical protein1e-0964.7
NC_014814:5422972:5455068545506854562791212Mycobacterium sp. Spyr1 chromosome, complete genomehypothetical protein1e-0964.3
NC_009051:2097271:2106187210618721074671281Methanoculleus marisnigri JR1, complete genomefilamentation induced by cAMP protein Fic2e-0963.9
NC_009445:6621996:6649106664910666502361131Bradyrhizobium sp. ORS 278 chromosome, complete genomehypothetical protein2e-0963.9
NC_015436:1758257:1773078177307817741331056Spirochaeta coccoides DSM 17374 chromosome, complete genomefilamentation induced by cAMP protein Fic2e-0963.9
NC_013204:3491441:3503874350387435050851212Eggerthella lenta DSM 2243, complete genomefilamentation induced by cAMP protein Fic2e-0963.5
NC_017219:2646157:2686768268676826878381071Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein3e-0963.2
NC_011593:2650156:2690767269076726918371071Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,filamentation induced by cAMP protein fic3e-0963.2
NC_016745:2161408:2167272216727221682761005Oceanimonas sp. GK1 chromosome, complete genomehypothetical protein3e-0963.2
NC_010612:681544:6884416884416896551215Mycobacterium marinum M, complete genomehypothetical protein4e-0962.8
NC_009429:686608:6944836944836955801098Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, completehypothetical protein5e-0962.4
NC_015737:449914:4639074639074649561050Clostridium sp. SY8519, complete genomehypothetical protein5e-0962.4
NC_014216:1197704:121779112177911217919129Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomehypothetical protein4e-0962.4
NC_009485:3461051:3469791346979134709211131Bradyrhizobium sp. BTAi1 chromosome, complete genomehypothetical protein9e-0961.6
NC_015424:3520783:3554555355455535555831029Aeromonas veronii B565 chromosome, complete genomeFilamentation induced by cAMP protein Fic1e-0861.2
NC_017219:2646157:268544826854482686155708Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein1e-0861.2
NC_011593:2650156:268944726894472690154708Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,Fis family transcriptional regulator1e-0861.2
NC_003295:3688000:3689968368996836910831116Ralstonia solanacearum GMI1000, complete genomehypothetical protein2e-0860.1
NC_015730:3693391:371633137163313717223893Roseobacter litoralis Och 149 chromosome, complete genome2e-0860.1
NC_020156:3157899:3174617317461731757381122Nonlabens dokdonensis DSW-6, complete genomefilamentation induced by cAMP protein Fic3e-0859.7
NC_016789:224697:2427182427182441841467Corynebacterium diphtheriae PW8 chromosome, complete genomehypothetical protein3e-0859.7
NC_012880:3982383:3999004399900440001461143Dickeya dadantii Ech703, complete genomefilamentation induced by cAMP protein Fic3e-0859.7
NC_013204:929434:950548950548951228681Eggerthella lenta DSM 2243, complete genomefilamentation induced by cAMP protein Fic4e-0859.3
NC_014306:4901390:4906423490642349077151293Erwinia billingiae Eb661, complete genomeFilamentation induced by cAMP protein Fic6e-0858.9
NC_014363:232385:264471264471265427957Olsenella uli DSM 7084 chromosome, complete genomefilamentation induced by cAMP protein Fic6e-0858.9
NC_014006:2932959:2942921294292129440331113Sphingobium japonicum UT26S chromosome 1, complete genomecell filamentation protein6e-0858.5
NC_016610:2489415:249863124986312499629999Tannerella forsythia ATCC 43037 chromosome, complete genomeFic family protein6e-0858.5
NC_017219:1830353:1835265183526518365301266Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein8e-0858.5
NC_011593:1830500:1835475183547518367401266Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,filamentation induced by cAMP protein fic8e-0858.5
NC_017218:1166844:1171768117176811730331266Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeFic/DOC family protein9e-0858.2
NC_013592:956829:9662679662679674091143Dickeya dadantii Ech586, complete genomefilamentation induced by cAMP protein Fic1e-0757.8
NC_013421:701005:7457637457637469051143Pectobacterium wasabiae WPP163, complete genomefilamentation induced by cAMP protein Fic1e-0757.8
NC_003454:865368:882010882010882177168Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeHypothetical cytosolic protein1e-0757.8
NC_011883:2826000:2836832283683228379471116Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,filamentation induced by cAMP protein Fic1e-0757.4
NC_009792:3225965:3232343323234332334431101Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-0757
NC_007519:3391090:340284934028493403610762Desulfovibrio alaskensis G20 chromosome, complete genomehypothetical protein2e-0757
NC_015436:202384:2114742114742125051032Spirochaeta coccoides DSM 17374 chromosome, complete genomefilamentation induced by cAMP protein Fic2e-0757
NC_006677:1503513:1516480151648015175831104Gluconobacter oxydans 621H, complete genomehypothetical protein3e-0756.6
NC_015554:3808529:3815452381545238167981347Alteromonas sp. SN2 chromosome, complete genomeFilamentation induced by cAMP protein Fic3e-0756.6
NC_013093:7222000:7234196723419672352811086Actinosynnema mirum DSM 43827, complete genomehypothetical protein8e-0755.1
NC_016043:1043366:104336610433661044100735Taylorella asinigenitalis MCE3 chromosome, complete genomehypothetical protein8e-0755.1
NC_008571:938835:965774965774966724951Gramella forsetii KT0803, complete genomefilamentation induced by cAMP (Fic) family prote in8e-0755.1
NC_004757:267165:2859432859432874631521Nitrosomonas europaea ATCC 19718, complete genomehypothetical protein1e-0654.7
NC_010545:83353:9076090760920431284Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein1e-0654.7
NC_014921:830334:8303348303348313801047Mycoplasma fermentans M64 chromosome, complete genomefilamentation induced by camp protein fic1e-0654.3
NC_014500:1066911:1075225107522510763671143Dickeya dadantii 3937 chromosome, complete genomehypothetical protein1e-0654.3
NC_014364:773500:7854007854007865901191Spirochaeta smaragdinae DSM 11293 chromosome, complete genomefilamentation induced by cAMP protein Fic2e-0653.9
NC_015277:325207:3336163336163346591044Sphingobacterium sp. 21 chromosome, complete genometranscriptional regulator, MarR family3e-0653.5
NC_016047:4108910:4108910410891041101421233Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeFic protein family2e-0653.5
NC_015437:438538:4590864590864603211236Selenomonas sputigena ATCC 35185 chromosome, complete genomefilamentation induced by cAMP protein Fic2e-0653.5
NC_009512:755658:7609617609617621451185Pseudomonas putida F1, complete genomefilamentation induced by cAMP protein Fic2e-0653.5
NC_021150:3698696:3715903371590337170271125Azotobacter vinelandii CA6, complete genomeFic (filamentation induced by cAMP) protein2e-0653.5
NC_012560:3698697:3715904371590437170281125Azotobacter vinelandii DJ, complete genomeFic (filamentation induced by cAMP) protein2e-0653.5
NC_004757:2730057:2738984273898427401081125Nitrosomonas europaea ATCC 19718, complete genomehypothetical protein3e-0652.8
NC_005810:4045303:4066426406642640675681143Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein4e-0652.8
NC_002663:1988000:1996331199633119974791149Pasteurella multocida subsp. multocida str. Pm70, complete genomehypothetical protein9e-0651.6