Pre_GI Gene

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Host: NC_013061 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013061:4286913 Pedobacter heparinus DSM 2366, complete genome

Host Lineage: Pedobacter heparinus; Pedobacter; Sphingobacteriaceae; Sphingobacteriales; Bacteroidetes; Bacteria

General Information: Isolation: Soil; Temp: Mesophile; Temp: 25 - 30C; Habitat: Soil. Formerly Sphingobacterium heparinum this organism was isolated from soil. This organism is able to degrade heparin and heparan sulfate glycosaminoglycans, which are components of extracellular polysaccharides and the cell surface.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
42859964286919924hypothetical proteinBLASTP
428691342884961584RagBSusD domain proteinQuickGO ontologyBLASTP
428850342916823180TonB-dependent receptor plugQuickGO ontologyBLASTP
429196542929901026regulatory protein GntR HTHQuickGO ontologyBLASTP
429307442948341761peptidase S8 and S53 subtilisin kexin sedolisinQuickGO ontologyBLASTP
429502042951311125S ribosomal RNAQuickGO ontology
42952664298143287823S ribosomal RNAQuickGO ontologyBLASTP
4298370429844677tRNA-AlaQuickGO ontologyBLASTP
4298465429853975tRNA-IleQuickGO ontology
42987214300230151016S ribosomal RNAQuickGO ontologyBLASTP
430095343020741122filamentation induced by cAMP protein FicQuickGO ontologyBLASTP
43025874305464287823S ribosomal RNAQuickGO ontologyBLASTP
4305691430576777tRNA-AlaQuickGO ontologyBLASTP
4305786430586075tRNA-IleQuickGO ontology
43060424307551151016S ribosomal RNAQuickGO ontologyBLASTP