Query: NC_013315:3214063 Clostridium difficile CD196 chromosome, complete genome
Start: 3214063, End: 3233954, Length: 19892
Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria
General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_010723:2735196 | 2735196 | 2753886 | 18691 | Clostridium botulinum E3 str. Alaska E43, complete genome | 2e-59 | 238 | BLASTN svg | BLASTP svg |
NC_010674:2930259 | 2930259 | 2949576 | 19318 | Clostridium botulinum B str. Eklund 17B, complete genome | 2e-59 | 238 | BLASTN svg | BLASTP svg |
NC_012563:2979147 | 2979147 | 3002490 | 23344 | Clostridium botulinum A2 str. Kyoto, complete genome | 4e-57 | 230 | BLASTN svg | BLASTP svg |
NC_008593:841291 | 841291 | 864621 | 23331 | Clostridium novyi NT, complete genome | 2e-50 | 208 | BLASTN svg | BLASTP svg |
NC_013192:815854 | 815854 | 838099 | 22246 | Leptotrichia buccalis DSM 1135, complete genome | 1e-35 | 159 | BLASTN svg | BLASTP svg |
NC_008261:2117207 | 2117207 | 2140235 | 23029 | Clostridium perfringens ATCC 13124, complete genome | 7e-25 | 123 | BLASTN svg | BLASTP svg |
NC_008262:1795914 | 1795914 | 1814284 | 18371 | Clostridium perfringens SM101, complete genome | 4e-20 | 107 | BLASTN svg | BLASTP svg |
NC_015216:405657 | 405657 | 428274 | 22618 | Methanobacterium sp. AL-21 chromosome, complete genome | 4e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_014614:2434017* | 2434017 | 2458067 | 24051 | Clostridium sticklandii, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_013926:1205443* | 1205443 | 1225067 | 19625 | Aciduliprofundum boonei T469 chromosome, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_012883:1603744* | 1603744 | 1626510 | 22767 | Thermococcus sibiricus MM 739, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_003366:1901898 | 1901898 | 1924407 | 22510 | Clostridium perfringens str. 13, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_014122:393856 | 393856 | 416381 | 22526 | Methanocaldococcus infernus ME chromosome, complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_015636:1477221* | 1477221 | 1502599 | 25379 | Methanothermococcus okinawensis IH1 chromosome, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_009975:1500978* | 1500978 | 1523099 | 22122 | Methanococcus maripaludis C6, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_015574:2057602* | 2057602 | 2082109 | 24508 | Methanobacterium sp. SWAN-1 chromosome, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_015847:1119666* | 1119666 | 1144587 | 24922 | Methanococcus maripaludis XI chromosome, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_005791:1028500* | 1028500 | 1051545 | 23046 | Methanococcus maripaludis S2, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_013407:1610221* | 1610221 | 1631749 | 21529 | Methanocaldococcus vulcanius M7, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_009135:494949* | 494949 | 518487 | 23539 | Methanococcus maripaludis C5, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015562:627000 | 627000 | 645292 | 18293 | Methanotorris igneus Kol 5 chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_014538:2396559 | 2396559 | 2422599 | 26041 | Thermoanaerobacter sp. X513 chromosome, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_007681:1300068* | 1300068 | 1324845 | 24778 | Methanosphaera stadtmanae DSM 3091, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_000909:201000* | 201000 | 221133 | 20134 | Methanocaldococcus jannaschii DSM 2661, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_013741:1390823* | 1390823 | 1414804 | 23982 | Archaeoglobus profundus DSM 5631, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_014976:2420000 | 2420000 | 2449747 | 29748 | Bacillus subtilis BSn5 chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_014222:186876 | 186876 | 208599 | 21724 | Methanococcus voltae A3 chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |