Pre_GI: BLASTP Hits

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Query: NC_012668:1623350:1651160 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 1651160, End: 1653235, Length: 2076

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006512:1942000:1964016196401619659681953Idiomarina loihiensis L2TR, complete genomeATP-dependent DNA helicase9e-53208
NC_013508:1262333:1275477127547712776422166Edwardsiella tarda EIB202, complete genomeATP-dependent DNA helicase1e-85317
NC_007530:1459412:1473989147398914767932805Bacillus anthracis str. 'Ames Ancestor', complete genomeATP-dependent DNA helicase5e-56219
NC_012471:781063:7810637810637835342472Streptococcus equi subsp. equi 4047, complete genomeATP-dependent DNA helicase7e-1376.3
NC_005945:1459357:1473943147394314767472805Bacillus anthracis str. Sterne, complete genomeATP-dependent DNA helicase5e-56219
NC_016147:151224:1769831769831791152133Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeATP-dependent DNA helicase DinG1e-95351
NC_011663:3181579:3200526320052632025982073Shewanella baltica OS223 chromosome, complete genomeATP-dependent DNA helicase DinG0685
NC_000909:858840:8714928714928734471956Methanocaldococcus jannaschii DSM 2661, complete genomeATP-dependent DNA helicase DinG, putative (dinG)6e-1686.7
NC_015387:155728:1705131705131755345022Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeATP-dependent DNA helicase, RecQ family2e-1482
NC_006177:2943259:2944650294465029466201971Symbiobacterium thermophilum IAM 14863, complete genomeATP-dependent helicase1e-1895.5
NC_010513:2031936:2054384205438420564112028Xylella fastidiosa M12 chromosome, complete genomeATP-dependent helicase2e-33144
NC_017188:1172181:1173325117332511752441920Bacillus amyloliquefaciens TA208 chromosome, complete genomeATP-dependent helicase4e-23110
NC_017190:2130651:2282243228224322841621920Bacillus amyloliquefaciens LL3 chromosome, complete genomeATP-dependent helicase4e-23110
NC_010278:860165:8605918605918625131923Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,ATP-dependent helicase1e-59231
NC_017191:1173989:1174902117490211768211920Bacillus amyloliquefaciens XH7 chromosome, complete genomeATP-dependent helicase4e-23110
NC_004556:2078000:2099787209978721018082022Xylella fastidiosa Temecula1, complete genomeATP-dependent helicase2e-33144
NC_014012:3356629:3369385336938533714902106Shewanella violacea DSS12, complete genomeATP-dependent helicase DinG0682
NC_018870:2537350:2559345255934525612611917Thermacetogenium phaeum DSM 12270 chromosome, complete genomeATP-dependent helicase YoaA3e-32140
NC_013416:1588369:1609357160935716112941938Aggregatibacter actinomycetemcomitans D11S-1, complete genomeATP-dependent helicase, dexd family4e-52206
NC_016513:1924242:1945284194528419472211938Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeATP-dependent helicase, dexd family4e-52206
NC_011761:2217632:2237968223796822398931926Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeATP-dependent helicase, DEXD family2e-51204
NC_007759:2097734:2101559210155921043122754Syntrophus aciditrophicus SB, complete genomeATP-dependent helicase, dinG family2e-1998.2
NC_015318:249445:2735432735432757622220Hippea maritima DSM 10411 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein7e-35149
NC_013895:1086500:1101402110140211038822481Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completeDEAD_2 domain protein2e-0757.8
NC_008609:1976403:1985878198587819883012424Pelobacter propionicus DSM 2379, complete genomeDEAD_2 domain protein1e-0758.5
NC_017150:1833087:1833087183308718360652979Acetobacter pasteurianus IFO 3283-01-42C, complete genomeDNA helicase C27e-1376.3
NC_013209:1925341:1925341192534119283192979Acetobacter pasteurianus IFO 3283-01, complete genomeDNA helicase C27e-1376.3
NC_017108:1925323:1925323192532319283012979Acetobacter pasteurianus IFO 3283-12, complete genomeDNA helicase C27e-1376.3
NC_017111:1925311:1925311192531119282892979Acetobacter pasteurianus IFO 3283-32, complete genomeDNA helicase C27e-1376.3
NC_017121:1925323:1925323192532319283012979Acetobacter pasteurianus IFO 3283-07, complete genomeDNA helicase C27e-1376.3
NC_021182:2422226:2427789242778924301432355Clostridium pasteurianum BC1, complete genomeDNA helicase, Rad38e-0859.7
NC_020304:2107979:2121777212177721237351959Desulfocapsa sulfexigens DSM 10523, complete genomeDNA helicase, Rad32e-57224
NC_020064:1409596:1411719141171914139202202Serratia marcescens FGI94, complete genomeDNA helicase, Rad33e-89330
NC_013204:3613824:3619594361959436224942901Eggerthella lenta DSM 2243, complete genomeDNA polymerase III, epsilon subunit4e-21103
NC_015389:2101841:2105296210529621082292934Coriobacterium glomerans PW2 chromosome, complete genomeDNA polymerase III, epsilon subunit3e-30134
NC_014363:2035141:4254425472593006Olsenella uli DSM 7084 chromosome, complete genomeDNA polymerase III, epsilon subunit6e-29129
NC_000868:1299027:1299744129974413016571914Pyrococcus abyssi GE5, complete genomedna repair helicase rad37e-0963.2
NC_015474:1216971:1235488123548812374041917Pyrococcus sp. NA2 chromosome, complete genomeDNA repair helicase rad32e-0758.5
NC_003413:893960:8953958953958972901896Pyrococcus furiosus DSM 3638, complete genomeDNA repair helicase rad3, putative4e-0860.5
NC_008593:37456:5535655356577102355Clostridium novyi NT, complete genomeDNA repair helicase, truncation, putative3e-0757.8
NC_010694:2492378:2515667251566725178292163Erwinia tasmaniensis, complete genomeDNA-damage-inducible protein G2e-94347
NC_014960:1697818:1714903171490317177072805Anaerolinea thermophila UNI-1, complete genomeDnaQ exonuclease/DinG helicase family protein2e-36154
NC_008095:7172047:7172047717204771750132967Myxococcus xanthus DK 1622, complete genomeexonuclease2e-1585.1
NC_013165:3146000:3150468315046831534282961Slackia heliotrinireducens DSM 20476, complete genomeexonuclease, DNA polymerase III, epsilon subunit family8e-21102
NC_014622:5378000:5399269539926954016412373Paenibacillus polymyxa SC2 chromosome, complete genomehelicase4e-0757.4
NC_009635:985935:99907999907910011992121Methanococcus aeolicus Nankai-3 chromosome, complete genomehelicase4e-0963.9
NC_016641:1148220:1167520116752011698802361Paenibacillus terrae HPL-003 chromosome, complete genomehelicase3e-0757.8
NC_013510:1786194:1806786180678618093202535Thermomonospora curvata DSM 43183, complete genomehelicase c24e-23110
NC_009637:438037:4755144755144775232010Methanococcus maripaludis C7 chromosome, complete genomehelicase c22e-0965.1
NC_009052:1899954:1899954189995419020262073Shewanella baltica OS155, complete genomehelicase c20689
NC_014541:1280835:1280835128083512829102076Ferrimonas balearica DSM 9799 chromosome, complete genomehelicase c26e-177621
NC_014376:3732547:3767316376731637695772262Clostridium saccharolyticum WM1 chromosome, complete genomehelicase c25e-1996.7
NC_008321:2922000:2938352293835229404242073Shewanella sp. MR-4, complete genomehelicase c20700
NC_009092:2902171:2922369292236929244412073Shewanella loihica PV-4, complete genomehelicase c20674
NC_015563:1951368:1993993199399319961762184Delftia sp. Cs1-4 chromosome, complete genomehelicase c29e-101368
NC_008781:1973826:1985933198593319879392007Polaromonas naphthalenivorans CJ2, complete genomehelicase c27e-47189
NC_009135:330628:3306283306283326372010Methanococcus maripaludis C5, complete genomehelicase c21e-0965.5
NC_008322:2983951:2999035299903530011072073Shewanella sp. MR-7, complete genomehelicase c20701
NC_008786:4040864:4057356405735640593501995Verminephrobacter eiseniae EF01-2, complete genomehelicase c21e-52208
NC_012691:1144715:1161276116127611632942019Tolumonas auensis DSM 9187, complete genomehelicase c27e-48192
NC_010577:2093261:2115613211561321176402028Xylella fastidiosa M23, complete genomehelicase c22e-33144
NC_010001:1884500:1896045189604518979521908Clostridium phytofermentans ISDg, complete genomehelicase c22e-29131
NC_014165:2533040:2561775256177525638052031Thermobispora bispora DSM 43833 chromosome, complete genomehelicase c24e-26120
NC_008577:3125675:3138875313887531409472073Shewanella sp. ANA-3 chromosome 1, complete sequencehelicase c20701
NC_015385:1406419:1407133140713314095802448Treponema succinifaciens DSM 2489 chromosome, complete genomehelicase c26e-61236
NC_013517:2055071:2069589206958920720872499Sebaldella termitidis ATCC 33386, complete genomehelicase c27e-37155
NC_013440:1131376:1158011115801111599541944Haliangium ochraceum DSM 14365, complete genomehelicase c21e-29132
NC_002947:1268089:1286616128661612887602145Pseudomonas putida KT2440, complete genomehelicase, putative4e-117422
NC_009454:1462930:1466970146697014697832814Pelotomaculum thermopropionicum SI, complete genomehypothetical protein1e-54215
NC_014228:1336466:1352224135222413543592136Xenorhabdus nematophila ATCC 19061, complete genomeLexA-regulated (SOS) repair enzyme6e-85315
NC_008767:273759:2952542952542974042151Neisseria meningitidis FAM18, complete genomeprobable ATP-dependent DNA helicase4e-124446
NC_013282:2582720:2604087260408726059971911Cronobacter turicensis, complete genomeProbable ATP-dependent helicase yoaA1e-52208
NC_010545:1691999:1719134171913417211372004Corynebacterium urealyticum DSM 7109, complete genomeputative ATP-dependent DNA helicase1e-25119
NC_009053:895965:8970878970878990091923Actinobacillus pleuropneumoniae L20, complete genomeputative ATP-dependent helicase5e-59229
NC_015847:1261276:1293731129373112957402010Methanococcus maripaludis XI chromosome, complete genomeputative dinG ATP-dependent helicase2e-0965.1
NC_013715:1606396:1620523162052316225952073Rothia mucilaginosa DY-18, complete genomeRad3-related DNA helicase2e-26121
NC_008758:12000:300963009631088993Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, completeRad3-related DNA helicases-like protein2e-28127
NC_005125:637333:6558176558176579762160Gloeobacter violaceus PCC 7421, complete genomesimilar to ATP-dependent helicase8e-47189