Pre_GI: BLASTP Hits

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Query: NC_009438:212476:224815 Shewanella putrefaciens CN-32 chromosome, complete genome

Start: 224815, End: 225681, Length: 867

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008750:450233:462375462375463241867Shewanella sp. W3-18-1, complete genomemicrocompartments protein5e-158556
NC_012488:1159463:116989211698921170329438Listeria monocytogenes Clip81459, complete genomePduK protein6e-1788.2
NC_013766:1202713:121184412118441212281438Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein5e-1581.6
NC_014633:442755:457236457236457805570Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencemicrocompartments protein1e-0964.3
NC_008750:450233:468932468932469234303Shewanella sp. W3-18-1, complete genomemicrocompartment protein1e-0860.8
NC_009438:212476:231372231372231674303Shewanella putrefaciens CN-32 chromosome, complete genomemicrocompartments protein1e-0860.8
NC_016584:5625975:564473956447395645038300Desulfosporosinus orientis DSM 765 chromosome, complete genomecarbon dioxide concentrating mechanism/carboxysome shell protein2e-0859.7
NC_007946:4875997:487629948762994876577279Escherichia coli UTI89, complete genomehypothetical protein4e-0858.9
NC_007946:4875997:487599748759974876281285Escherichia coli UTI89, complete genomehypothetical protein4e-0858.9
NC_011837:830436:8471408471408482341095Clostridium kluyveri NBRC 12016, complete genomehypothetical protein5e-0858.5
NC_009699:2287893:230914623091462309442297Clostridium botulinum F str. Langeland chromosome, complete genomemicrocompartments family protein5e-0858.5
NC_012658:2295536:231729723172972317593297Clostridium botulinum Ba4 str. 657 chromosome, complete genomemicrocompartments family protein5e-0858.5
NC_017297:2288000:230926223092622309558297Clostridium botulinum F str. 230613 chromosome, complete genomebacterial microcompartments family protein5e-0858.5
NC_009706:830461:8471688471688482591092Clostridium kluyveri DSM 555 chromosome, complete genomemicrocompartment shellprotein5e-0858.5
NC_009698:2171151:218878821887882189084297Clostridium botulinum A str. Hall chromosome, complete genomemicrocompartments family protein6e-0858.2
NC_009697:2173000:218856921885692188865297Clostridium botulinum A str. ATCC 19397 chromosome, completemicrocompartments family protein6e-0858.2
NC_009495:2244774:225992722599272260223297Clostridium botulinum A str. ATCC 3502 chromosome, complete genomemicrocompartments family protein6e-0858.2
NC_009922:411434:421122421122421499378Alkaliphilus oremlandii OhILAs, complete genomemicrocompartments protein1e-0757.4
NC_008816:518895:528795528795529106312Prochlorococcus marinus str. AS9601, complete genomecarboxysome shell protein CsoS11e-0757
NC_007577:503440:513352513352513663312Prochlorococcus marinus str. MIT 9312, complete genomecarboxysome shell protein CsoS11e-0757
NC_009840:544816:554730554730555041312Prochlorococcus marinus str. MIT 9215, complete genomecarboxysome shell protein CsoS11e-0757
NC_009091:493302:503223503223503534312Prochlorococcus marinus str. MIT 9301, complete genomecarboxysome shell protein CsoS11e-0757
NC_015589:2100175:210202421020242102323300Desulfotomaculum ruminis DSM 2154 chromosome, complete genomemicrocompartments protein3e-0756.2
NC_005072:508827:518725518725519021297Prochlorococcus marinus subsp. pastoris str. CCMP1986, completecarboxysome shell protein CsoS13e-0756.2
NC_007335:1820332:182903218290321829343312Prochlorococcus marinus str. NATL2A, complete genomecarboxysome shell protein CsoS13e-0755.8
NC_008819:541000:548895548895549206312Prochlorococcus marinus str. NATL1A, complete genomecarboxysome shell protein CsoS13e-0755.8
NC_005042:513931:524074524074524385312Prochlorococcus marinus subsp. marinus str. CCMP1375, completeCarboxysome shell peptide, CsoS13e-0755.8
NC_008817:539349:549224549224549535312Prochlorococcus marinus str. MIT 9515, complete genomecarboxysome shell protein CsoS13e-0755.8
NC_014654:1113116:112400511240051124574570Halanaerobium sp. 'sapolanicus' chromosome, complete genomemicrocompartments protein8e-0754.7
NC_009699:2287893:230881423088142309122309Clostridium botulinum F str. Langeland chromosome, complete genomemicrocompartments family protein7e-0754.7
NC_012658:2295536:231696523169652317273309Clostridium botulinum Ba4 str. 657 chromosome, complete genome7e-0754.7
NC_017297:2288000:230893023089302309238309Clostridium botulinum F str. 230613 chromosome, complete genomebacterial microcompartments family protein7e-0754.7
NC_009495:2244774:225959522595952259903309Clostridium botulinum A str. ATCC 3502 chromosome, complete genomemicrocompartments family protein7e-0754.7
NC_009697:2173000:218823721882372188545309Clostridium botulinum A str. ATCC 19397 chromosome, completemicrocompartments family protein7e-0754.7
NC_009698:2171151:218845621884562188764309Clostridium botulinum A str. Hall chromosome, complete genomemicrocompartments family protein7e-0754.7
NC_008819:541000:555761555761556309549Prochlorococcus marinus str. NATL1A, complete genomecarboxysome structural protein CsoS11e-0654.3
NC_007335:1820332:183589818358981836446549Prochlorococcus marinus str. NATL2A, complete genomecarboxysome shell peptide, CsoS11e-0654.3
NC_014328:4316008:433563543356354335931297Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative microcompartment shellprotein9e-0754.3
NC_005042:513931:530906530906531415510Prochlorococcus marinus subsp. marinus str. CCMP1375, completeCarboxysome shell peptide, CsoS11e-0653.9
NC_007520:903799:923593923593923901309Thiomicrospira crunogena XCL-2, complete genomemicrocompartments protein1e-0653.9
NC_008319:1727686:174459617445961745027432Synechococcus sp. CC9311, complete genomepossible carbon dioxide concentrating mechanism protein CcmK1e-0653.9
NC_007520:903799:923273923273923566294Thiomicrospira crunogena XCL-2, complete genomemicrocompartments protein2e-0653.5
NC_007520:903799:922956922956923246291Thiomicrospira crunogena XCL-2, complete genomemicrocompartments protein2e-0653.5
NC_015581:1791658:180071418007141801022309Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomemicrocompartments protein1e-0653.5
NC_014614:284005:296676296676297182507Clostridium sticklandii, complete genomehypothetical protein3e-0652.8
NC_015581:1791658:180109818010981801397300Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomemicrocompartments protein4e-0652.4
NC_008344:811386:829498829498829845348Nitrosomonas eutropha C91, complete genomemicrocompartments protein4e-0652.4
NC_009922:411434:420510420510420776267Alkaliphilus oremlandii OhILAs, complete genomemicrocompartments protein7e-0651.2
NC_012658:2295536:230715823071582307961804Clostridium botulinum Ba4 str. 657 chromosome, complete genomemicrocompartments family protein9e-0650.8