Pre_GI: BLASTP Hits

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Query: NC_008710:703740:740797 Borrelia turicatae 91E135, complete genome

Start: 740797, End: 741297, Length: 501

Host Lineage: Borrelia turicatae; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in the USA from the soft tick Ornithodoros turicatae. Borrelia turicatae is the causative agent of tick-borne relapsing fever in the southwestern USA. Ticks become infected with Borrelia while feeding on an infected mammal, usually a rodent or squirrel. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the spirochete into a mammalian host through its infectious saliva. Relapsing fever is characterized by period of chills, fever, headache, and malaise, followed by an asymptomatic, followed by another episode of symptoms. The cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010673:703816:743509743509744009501Borrelia hermsii DAH, complete genome16S rRNA processing protein RimM2e-78291
NC_011244:746801:755472755472755972501Borrelia recurrentis A1, complete genome16S rRNA-processing protein RimM6e-67252
NC_016633:541559:543291543291543797507Sphaerochaeta pleomorpha str. Grapes chromosome, complete genome16S rRNA processing protein RimM9e-1992.8
NC_015732:529201:534981534981535493513Spirochaeta caldaria DSM 7334 chromosome, complete genomeRibosome maturation factor rimM9e-1166.2
NC_014624:2668157:267255526725552673070516Eubacterium limosum KIST612 chromosome, complete genomeRimM protein2e-0961.6
NC_010610:1385066:141026714102671410776510Lactobacillus fermentum IFO 3956, complete genome16S rRNA processing protein RimM4e-0960.8
NC_017515:1653306:166885016688501669359510Neisseria meningitidis M04-240196 chromosome, complete genome16S rRNA processing protein RimM3e-0960.8
NC_003112:603879:622365622365622874510Neisseria meningitidis MC58, complete genome16S rRNA-processing protein5e-0960.5
NC_014483:1973233:198132319813231981838516Paenibacillus polymyxa E681 chromosome, complete genomeProbable 16S rRNA processing protein rimM8e-0959.7
NC_017518:672790:694289694289694798510Neisseria meningitidis NZ-05/33 chromosome, complete genome16S rRNA processing protein RimM2e-0858.2
NC_008767:549351:565156565156565665510Neisseria meningitidis FAM18, complete genomeputative 16S rRNA processing protein2e-0858.2
NC_017514:1640355:164035516403551640837483Neisseria meningitidis M01-240149 chromosome, complete genome16S rRNA processing protein RimM3e-0857.8
NC_013016:500789:520602520602521111510Neisseria meningitidis alpha14 chromosome, complete genome16S rRNA-processing protein RimM3e-0857.8
NC_017513:548882:567963567963568445483Neisseria meningitidis G2136 chromosome, complete genome16S rRNA processing protein RimM3e-0857.8
NC_017517:635235:652856652856653338483Neisseria meningitidis M01-240355 chromosome, complete genome16S rRNA processing protein RimM3e-0857.8
NC_007947:2447635:248869224886922489186495Methylobacillus flagellatus KT, complete genome16S rRNA processing protein RimM1e-0756.2
NC_017501:1750580:175331217533121753821510Neisseria meningitidis 8013, complete genomeputative 16S rRNA processing protein RimM1e-0755.5
NC_016902:1165726:118900611890061189554549Escherichia coli KO11FL chromosome, complete genome16S rRNA processing protein RimM2e-0755.1
NC_012947:1106000:112747211274721128020549Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete16S rRNA-processing protein RimM2e-0755.1
CP002516:1165726:118900611890061189554549Escherichia coli KO11, complete genome16S rRNA processing protein RimM2e-0755.1
NC_010382:1607013:162188916218891622404516Lysinibacillus sphaericus C3-41, complete genome16S rRNA-processing protein3e-0754.7
NC_012969:2476318:251996125199612520455495Methylovorus glucosetrophus SIP3-4 chromosome, complete genome16S rRNA processing protein RimM2e-0754.7
NC_011740:448000:469311469311469859549Escherichia fergusonii ATCC 35469, complete genome16S rRNA processing protein3e-0754.3
NC_020164:1590221:159678215967821597285504Staphylococcus warneri SG1, complete genome16S rRNA-processing protein RimM8e-0753.1
NC_012225:2333500:235367223536722354178507Brachyspira hyodysenteriae WA1, complete genomeputative RimM protein, required for 16S processing2e-0651.6
NC_010520:2635750:264210826421082642602495Clostridium botulinum A3 str. Loch Maree, complete genome16S rRNA processing protein RimM3e-0650.8
NC_010830:757854:768708768708769229522Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein5e-0650.4
UCMB5137:1159520:117395711739571174481525Bacillus atrophaeus UCMB-513716S rRNA-processing protein RimM6e-0650.1
NC_020064:871338:875490875490876038549Serratia marcescens FGI94, complete genome16S rRNA processing protein RimM1e-0549.3