Pre_GI Gene

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Host: NC_010610 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010610:1385066 Lactobacillus fermentum IFO 3956, complete genome

Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
138506613882453180carbamoylphosphate synthase large subunitQuickGO ontologyBLASTP
138824513893271083carbamoylphosphate synthase small subunitQuickGO ontologyBLASTP
138932913906181290dihydroorotaseQuickGO ontologyBLASTP
13906181391583966aspartate carbamoyltransferaseQuickGO ontologyBLASTP
13922531392555303hypothetical proteinBLASTP
13925791393457879transposaseQuickGO ontologyBLASTP
13938921394182291hypothetical proteinBLASTP
139419213952231032hypothetical proteinBLASTP
13952201395876657hypothetical proteinBLASTP
13958801396758879hypothetical proteinBLASTP
139678013986811902hypothetical proteinBLASTP
13986781399418741hypothetical proteinBLASTP
139948414007041221transposaseQuickGO ontologyBLASTP
140077014032082439hypothetical proteinBLASTP
14034411404319879transposaseQuickGO ontologyBLASTP
14043431404645303hypothetical proteinBLASTP
140621214074981287transposaseQuickGO ontologyBLASTP
1407591140795036050S Ribosomal protein L19QuickGO ontologyBLASTP
140807114094981428amino acid transport proteinQuickGO ontologyBLASTP
14095091410267759tRNA guanine-N1--methyltransferaseQuickGO ontologyBLASTP
1410267141077651016S rRNA processing protein RimMQuickGO ontologyBLASTP
14109011411161261hypothetical proteinBLASTP
1411176141145127630S ribosomal protein S16QuickGO ontologyBLASTP
14115811412285705phosphate uptake regulatorQuickGO ontologyBLASTP
14123001413055756phosphate ABC transporter ATP-binding componentQuickGO ontologyBLASTP
14130681413949882phosphate ABC transporter permease componentQuickGO ontologyBLASTP
14139511414850900phosphate ABC transporter permease componentQuickGO ontologyBLASTP
14148501415731882phosphate ABC transporter substrate-binding componentQuickGO ontologyBLASTP