Pre_GI: BLASTP Hits

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Query: NC_008228:2068641:2070330 Pseudoalteromonas atlantica T6c, complete genome

Start: 2070330, End: 2070836, Length: 507

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003910:486776:502587502587502949363Colwellia psychrerythraea 34H, complete genomehypothetical protein1e-22105
NC_003910:486776:493626493626493946321Colwellia psychrerythraea 34H, complete genomehypothetical protein1e-21102
NC_009348:2738742:275134627513462751702357Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein8e-1889.7
NC_011026:2624775:263840726384072638760354Chloroherpeton thalassium ATCC 35110, complete genomeprotein of unknown function DUF4197e-1786.7
NC_015957:8845274:887267988726798873044366Streptomyces violaceusniger Tu 4113 chromosome, complete genomeMmcQ-like protein2e-1685.1
NC_016113:803268:816402816402816785384Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencehypothetical protein2e-1684.7
NC_015571:722815:738266738266738646381Porphyromonas gingivalis TDC60, complete genomehypothetical protein9e-1682.8
NC_014622:724000:727947727947728294348Paenibacillus polymyxa SC2 chromosome, complete genomehypothetical protein4e-1580.5
NC_016628:763833:790901790901791281381Vibrio furnissii NCTC 11218 chromosome 2, complete sequencehypothetical protein1e-1479.3
NC_020410:495184:510195510195510536342Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeUncharacterized protein yyaQ2e-1478.6
NC_019842:484933:506798506798507139342Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein7e-1476.6
NC_015690:7518732:752693575269357527300366Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein2e-1375.1
NC_009725:496443:511366511366511707342Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein2e-1375.1
NC_015977:189101:208136208136208462327Roseburia hominis A2-183 chromosome, complete genomemethylated-DNA-(protein)-cysteine S-methyltransferase3e-1374.3
NC_016641:2735054:274303627430362743380345Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein8e-1373.2
NC_014376:1879000:188780018878001888135336Clostridium saccharolyticum WM1 chromosome, complete genomemethylated-DNA-(protein)-cysteine S-methyltransferase5e-1270.5
NC_016047:2658000:269015326901532690485333Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeMmcQ protein9e-1269.3
NC_003910:486776:507044507044507205162Colwellia psychrerythraea 34H, complete genomehypothetical protein6e-1063.5
NC_014643:2354507:237160123716012372170570Rothia dentocariosa ATCC 17931 chromosome, complete genomehypothetical protein8e-1063.2
NC_009614:2431005:245368424536842454040357Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein4e-0960.8
NC_012526:2317862:233088323308832331239357Deinococcus deserti VCD115, complete genomehypothetical protein4e-0960.8
NC_011894:4013830:402176340217634022146384Methylobacterium nodulans ORS 2060, complete genomeprotein of unknown function DUF4198e-0959.7
NC_020063:3352516:336137233613723361740369Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein1e-0858.9
NC_011083:4466634:446789544678954468251357Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,protein YjbR2e-0858.9
NC_011080:4461851:446311244631124463468357Salmonella enterica subsp. enterica serovar Newport str. SL254,protein YjbR2e-0858.9
NC_010067:3310336:335658133565813356943363Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-0858.5
NC_006905:4405301:440656244065624406918357Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein2e-0858.5
NC_010102:4396500:439790043979004398256357Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0858.5
NC_011149:4390315:439157643915764391932357Salmonella enterica subsp. enterica serovar Agona str. SL483,protein YjbR2e-0858.5
NC_011094:4361238:436249943624994362855357Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-0858.5
NC_012125:4400636:440189744018974402253357Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-0858.5
NC_009436:1141376:117846211784621178830369Enterobacter sp. 638, complete genomehypothetical protein3e-0857.8
NC_010658:4257310:426903042690304269386357Shigella boydii CDC 3083-94, complete genomehypothetical protein6e-0857
NC_007613:4119771:412759741275974127953357Shigella boydii Sb227, complete genomehypothetical protein6e-0856.6
NC_003197:4470683:447194444719444472300357Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein1e-0755.8
NC_011205:4486142:448740344874034487759357Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-0755.8
NC_011274:4305812:430707343070734307429357Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-0755.8
NC_011294:4327904:432916543291654329521357Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-0755.8
NC_016810:4491975:449323644932364493592357Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-0755.8
NC_016831:4286000:428742342874234287779357Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-0755.8
NC_016856:4482845:448548644854864485842357Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein1e-0755.8
NC_016857:4491976:449323744932374493593357Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein1e-0755.8
NC_016860:4575772:457703345770334577389357Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-0755.8
NC_016863:4431831:443309244330924433448357Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein1e-0755.8
NC_017046:4490500:449189744918974492253357Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein1e-0755.8
NC_015761:4098481:409973540997354100097363Salmonella bongori NCTC 12419, complete genomehypothetical protein1e-0755.5
NC_011147:4221000:422240342224034222759357Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-0755.5
NC_006511:4225455:422671642267164227072357Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-0755.5
NC_000964:4164683:418511641851164185472357Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein7e-0753.1
NC_014976:2175667:218250721825072182863357Bacillus subtilis BSn5 chromosome, complete genomehypothetical protein9e-0752.8
NC_016832:4288980:429024142902414290597357Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-0652.4
NC_003198:4315807:431706843170684317424357Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-0652.4
NC_004631:4300457:430171843017184302074357Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-0652.4
NC_010278:860165:876908876908877675768Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hypothetical protein1e-0652.4
NC_009053:895965:913424913424914191768Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein1e-0652.4
NC_021066:3769405:379039237903923790748357Raoultella ornithinolytica B6, complete genomehypothetical protein1e-0652.4
NC_004547:1837500:184746218474621848211750Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein2e-0652
NC_020181:3585898:361742636174263617749324Enterobacter aerogenes EA1509E, complete genomeProtein yjbR2e-0651.6