Pre_GI: BLASTP Hits

Some Help

Query: NC_008148:672608:672608 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 672608, End: 673960, Length: 1353

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015656:2795784:2795784279578427972951512Frankia symbiont of Datisca glomerata chromosome, complete genomeCobyrinic acid A,C-diamide synthase7e-74278
NC_012491:1263469:1279988127998812813641377Brevibacillus brevis NBRC 100599, complete genomecobyrinic acid A,C-diamide synthase2e-61237
NC_015437:1038476:1037077103707710384831407Selenomonas sputigena ATCC 35185 chromosome, complete genomecobyrinic acid a,c-diamide synthase7e-61234
NC_006085:481231:4812314812314836542424Propionibacterium acnes KPA171202, complete genomecobyrinic acid a,c-diamide synthase6e-58225
NC_016641:1085862:1090589109058910920431455Paenibacillus terrae HPL-003 chromosome, complete genomecobyrinic acid a,c-diamide synthase1e-57224
NC_016516:463460:4634604634604658892430Propionibacterium acnes TypeIA2 P.acn33 chromosome, completecobyrinic acid a,c-diamide synthase3e-57223
NC_014039:499233:4992334992335016562424Propionibacterium acnes SK137 chromosome, complete genomecobyrinic acid a,c-diamide synthase4e-57222
NC_016511:472666:4726664726664750922427Propionibacterium acnes TypeIA2 P.acn31 chromosome, completecobyrinic acid a,c-diamide synthase4e-57222
NC_014622:5315500:5321693532169353231471455Paenibacillus polymyxa SC2 chromosome, complete genomecobyrinate a,c-diamide synthase / hydrogenobyrinic acid a,c-diamide synthase4e-57222
NC_014483:4957315:4963400496340049648571458Paenibacillus polymyxa E681 chromosome, complete genomeCobyrinic acid A,C-diamide synthase3e-56219
NC_016781:1408235:1408235140823514096081374Corynebacterium pseudotuberculosis 3/99-5 chromosome, completecobyrinic acid A,C-diamide synthase2e-55217
NC_014329:1407880:1408415140841514097881374Corynebacterium pseudotuberculosis FRC41 chromosome, completecobyrinic acid a,c-diamide synthase2e-55217
NC_021171:415771:4283264283264296961371Bacillus sp. 1NLA3E, complete genomecobyrinic acid a,c-diamide synthase2e-55216
NC_015565:624298:6319126319126333061395Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeCobyrinic acid A,C-diamide synthase4e-55215
NC_009253:2927802:2941207294120729426041398Desulfotomaculum reducens MI-1 chromosome, complete genomecobyrinic acid a,c-diamide synthase3e-53209
NC_013156:127000:1409421409421422671326Methanocaldococcus fervens AG86, complete genomecobyrinic acid a,c-diamide synthase6e-53208
NC_013407:721344:7280177280177293451329Methanocaldococcus vulcanius M7, complete genomecobyrinic acid a,c-diamide synthase1e-51204
NC_015636:41968:5850858508598841377Methanothermococcus okinawensis IH1 chromosome, complete genomeCobyrinic acid A,C-diamide synthase8e-50198
NC_014002:1408085:1416951141695114183961446Methanohalophilus mahii DSM 5219 chromosome, complete genomehydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolyzing) ;cobyrinate a,c-diamide synthase3e-49196
NC_015064:2341152:2369577236957723710521476Acidobacterium sp. MP5ACTX9 chromosome, complete genomecobyrinic acid a,c-diamide synthase4e-49196
NC_010382:3350816:3358631335863133599981368Lysinibacillus sphaericus C3-41, complete genomecobyrinic acid A,C-diamide synthase1e-48194
NC_013947:3534209:3550127355012735515121386Stackebrandtia nassauensis DSM 44728 chromosome, complete genomecobyrinic acid a,c-diamide synthase1e-47191
NC_013517:1055854:1092840109284010941681329Sebaldella termitidis ATCC 33386, complete genomecobyrinic acid a,c-diamide synthase3e-47189
NC_013192:63111:9244492444937871344Leptotrichia buccalis DSM 1135, complete genomecobyrinic acid a,c-diamide synthase1e-46187
NC_012962:1827000:1830659183065918320411383Photorhabdus asymbiotica, complete genomecobyrinic acid a,c-diamide synthase5e-46186
NC_014633:442755:4660304660304673611332Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencehydrogenobyrinic acid a,c-diamide synthase/cobyrinate a,c-diamide synthase3e-46186
NC_009633:74500:8729887298887011404Alkaliphilus metalliredigens QYMF chromosome, complete genomecobyrinic acid a,c-diamide synthase1e-45184
NC_005126:3485330:3499135349913535005171383Photorhabdus luminescens subsp. laumondii TTO1, complete genomecobyrinic acid a,c-diamide synthase2e-45183
NC_007644:1638083:1663629166362916649811353Moorella thermoacetica ATCC 39073, complete genomecobyrinic acid a,c-diamide synthase4e-45182
NC_006138:225832:2339412339412353711431Desulfotalea psychrophila LSv54, complete genomecobyrinic acid A,C-diamide synthase (CobB)6e-44178
NC_013892:853366:8676708676708690641395Xenorhabdus bovienii SS-2004 chromosome, complete genomecobyrinic acid A,C-diamide synthase1e-43177
NC_007955:1108000:1121191112119111226601470Methanococcoides burtonii DSM 6242, complete genomecobyrinic acid a,c-diamide synthase7e-43175
NC_009051:1730104:1734447173444717358141368Methanoculleus marisnigri JR1, complete genomecobyrinic acid a,c-diamide synthase2e-42174
NC_016627:4203775:4210746421074642120891344Clostridium clariflavum DSM 19732 chromosome, complete genomehydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing), cobyrinate a,c-diamide synthase2e-41170
NC_007796:1291671:1308209130820913095611353Methanospirillum hungatei JF-1, complete genomecobyrinic acid a,c-diamide synthase2e-40167
NC_008701:168662:1712801712801726231344Pyrobaculum islandicum DSM 4184, complete genomecobyrinic acid a,c-diamide synthase3e-40166
NC_011898:1558208:1587129158712915885051377Clostridium cellulolyticum H10, complete genomecobyrinic acid a,c-diamide synthase3e-40166
NC_010525:285805:2912502912502925931344Thermoproteus neutrophilus V24Sta, complete genomecobyrinic acid a,c-diamide synthase8e-40165
NC_009440:21947:4020140201414901290Metallosphaera sedula DSM 5348 chromosome, complete genomehydrogenobyrinic acid a,c-diamide synthase / cobyrinate a,c-diamide synthase2e-39163
NC_021182:1245692:1253458125345812547771320Clostridium pasteurianum BC1, complete genomecobyrinic acid a,c-diamide synthase9e-39161
NC_009712:1446472:1448756144875614501291374Candidatus Methanoregula boonei 6A8, complete genomecobyrinic acid a,c-diamide synthase4e-38159
NC_004557:749330:7574917574917588101320Clostridium tetani E88, complete genomecobyrinic acid A,C-diamide synthase6e-38159
NC_015571:1065775:1085249108524910865681320Porphyromonas gingivalis TDC60, complete genomecobyrinic acid a,c-diamide synthase1e-37158
NC_016070:371185:3761223761223774531332Thermoproteus tenax Kra 1, complete genomecobyrinic acid a,c-diamide synthase8e-38158
NC_014734:3086165:3093076309307630944311356Paludibacter propionicigenes WB4 chromosome, complete genomecobyrinic acid a,c-diamide synthase2e-37156
NC_015435:21736:3998539985412921308Metallosphaera cuprina Ar-4 chromosome, complete genomehydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase4e-37155
NC_014328:3482980:3494451349445134957851335Clostridium ljungdahlii ATCC 49587 chromosome, complete genomecobyrinic acid A,C-diamide synthase CbiA2e-36153
NC_008593:2250871:2262012226201222633671356Clostridium novyi NT, complete genomecobyrinic acid a,c-diamide synthase4e-36152
NC_016791:1132451:1150425115042511517891365Clostridium sp. BNL1100 chromosome, complete genomecobyrinic acid a,c-diamide synthase2e-35150
NC_006347:2861498:2876337287633728776711335Bacteroides fragilis YCH46, complete genomecobyrinic acid a,c-diamide synthase8e-34145
NC_019903:1058657:1072932107293210744071476Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,cobyrinate a,c-diamide synthase1e-33144
NC_016776:2913966:2934930293493029362641335Bacteroides fragilis 638R, complete genomecobyrinic acid A,C-diamide synthase1e-33144
NC_003228:2929006:2949950294995029512841335Bacteroides fragilis NCTC 9343, complete genomecobyrinic acid A,C-diamide synthase1e-33144
NC_009465:813816:8175348175348189101377Candidatus Vesicomyosocius okutanii HA, complete genomeintracellular sulfur oxidation protein DsrN7e-33142
NC_017295:1507956:1518593151859315199061314Clostridium acetobutylicum EA 2018 chromosome, complete genomeCobyrinic acid a,c-diamide synthase CobB2e-32140
NC_015687:1508664:1520780152078015220931314Clostridium acetobutylicum DSM 1731 chromosome, complete genomecobyrinic acid a,c-diamide synthase2e-32140
NC_003030:1510000:1519179151917915204921314Clostridium acetobutylicum ATCC 824, complete genomeCobyrinic acid a,c-diamide synthase CobB2e-32140
NC_010001:1702350:1721101172110117224591359Clostridium phytofermentans ISDg, complete genomecobyrinic acid a,c-diamide synthase1e-29131
NC_010546:4786000:4792688479268847941541467Cyanothece sp. ATCC 51142 chromosome circular, complete sequencecobyrinic acid ac-diamide synthase8e-27122
NC_015948:1636491:1659329165932916606541326Haloarcula hispanica ATCC 33960 chromosome chromosome I, completecobyrinic acid a,c-diamide synthase6e-27122
NC_010511:2703684:2719552271955227208951344Methylobacterium sp. 4-46 chromosome, complete genomecobyrinic acid a,c-diamide synthase4e-27122
NC_008782:1136732:1151854115185411532121359Acidovorax sp. JS42, complete genomeCobB/CobQ domain protein glutamine amidotransferase4e-25116
NC_011992:1038985:1054113105411310554711359Acidovorax ebreus TPSY, complete genomeCobB/CobQ domain protein glutamine amidotransferase2e-24114
NC_013922:3290356:3292458329245832938191362Natrialba magadii ATCC 43099 chromosome, complete genomecobyrinic acid a,c-diamide synthase6e-24112
NC_015422:1163752:1186013118601311873651353Alicycliphilus denitrificans K601 chromosome, complete genomeCobB/CobQ domain-containing protein glutamine amidotransferase1e-21104
NC_019974:1020500:1045511104551110468271317Natronococcus occultus SP4, complete genomecobyrinate a,c-diamide synthase6e-1582.4
NC_003364:1528762:1542038154203815431651128Pyrobaculum aerophilum str. IM2, complete genomecobyrinic acid a,c-diamide synthase (cbiA) part 2, authentic frameshift7e-0755.5