Pre_GI: BLASTP Hits

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Query: NC_008044:3024125:3027115 Silicibacter sp. TM1040, complete genome

Start: 3027115, End: 3027609, Length: 495

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009952:3596399:363014436301443630662519Dinoroseobacter shibae DFL 12, complete genomeprotein-export protein SecB2e-51201
NC_007802:179780:185217185217185732516Jannaschia sp. CCS1, complete genomeprotein-export protein SecB6e-47186
NC_017062:61500:811998119981657459Rickettsia typhi str. B9991CWPP chromosome, complete genomepreprotein translocase subunit SecB3e-22104
NC_017044:80384:987119871199169459Rickettsia parkeri str. Portsmouth chromosome, complete genomepreprotein translocase subunit SecB6e-22103
NC_016913:1066790:107087910708791071337459Rickettsia rickettsii str. Brazil chromosome, complete genomepreprotein translocase subunit SecB2e-21101
NC_007354:1087456:108826210882621088795534Ehrlichia canis str. Jake, complete genomeprotein export chaperone SecB1e-1892
NC_007508:237771:241429241429241941513Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeexport protein SecB2e-1685.1
NC_012026:75812:906729067291199528Anaplasma marginale str. Florida, complete genomeprotein export chaperone (secB)7e-1683.2
NC_010793:1628500:162961716296171630111495Orientia tsutsugamushi str. Ikeda, complete genomeprotein-export protein SecB3e-1580.9
NC_015850:736680:738154738154738603450Acidithiobacillus caldus SM-1 chromosome, complete genomeprotein export cytoplasm chaperone protein2e-1478.2
NC_016816:127802:171275171275171745471Pantoea ananatis LMG 5342, complete genomeprotein-export protein SecB2e-1478.2
NC_016616:1336000:133731213373121337776465Dechlorosoma suillum PS chromosome, complete genomeprotein-export chaperone SecB1e-1375.5
NC_010468:80000:104451104451104918468Escherichia coli ATCC 8739, complete genomeprotein-export protein SecB2e-1375.1
NC_004337:3590323:375625737562573756724468Shigella flexneri 2a str. 301, complete genomeexport protein SecB2e-1375.1
CP002516:88500:112880112880113347468Escherichia coli KO11, complete genomeprotein-export protein SecB2e-1375.1
NC_012947:94930:119543119543120010468Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completepreprotein translocase subunit SecB2e-1375.1
NC_016902:88500:112880112880113347468Escherichia coli KO11FL chromosome, complete genomeprotein-export protein SecB2e-1375.1
NC_015696:105748:112992112992113441450Francisella sp. TX077308 chromosome, complete genomeprotein export cytoplasm chaperone protein SecB2e-1374.7
NC_020418:603750:608094608094608567474Morganella morganii subsp. morganii KT, complete genomeProtein export cytoplasm chaperone protein3e-1374.7
NC_013892:4129500:415011441501144150587474Xenorhabdus bovienii SS-2004 chromosome, complete genomemolecular chaperone in protein export, enhances activity of SecA (General Secretory Pathway)3e-1374.3
NC_007520:2128178:214600121460012146450450Thiomicrospira crunogena XCL-2, complete genomeprotein-export protein SecB4e-1373.9
NC_010336:733751:746984746984747433450Francisella philomiragia subsp. philomiragia ATCC 25017, completepreprotein translocase, subunit B1e-1272.4
NC_015572:293665:295468295468295944477Methylomonas methanica MC09 chromosome, complete genomeProtein-export protein secB7e-1270.1
NC_013851:3392644:341519834151983415671474Allochromatium vinosum DSM 180 chromosome, complete genomeprotein-export protein SecB3e-1167.8
NC_013016:419604:419604419604420047444Neisseria meningitidis alpha14 chromosome, complete genomepreprotein translocase subunit SecB7e-1166.6
NC_017518:577159:579144579144579587444Neisseria meningitidis NZ-05/33 chromosome, complete genomeprotein-export chaperone SecB1e-1065.9
NC_017514:446616:448601448601449044444Neisseria meningitidis M01-240149 chromosome, complete genomeprotein-export chaperone SecB1e-1065.9
NC_010120:452771:454755454755455198444Neisseria meningitidis 053442, complete genomeprotein-export protein1e-1065.9
NC_008767:451983:451983451983452426444Neisseria meningitidis FAM18, complete genomeputative protein-export protein1e-1065.9
NC_017513:449949:449949449949450392444Neisseria meningitidis G2136 chromosome, complete genomeprotein-export chaperone SecB3e-1064.7
NC_017512:425085:427070427070427513444Neisseria meningitidis WUE 2594, complete genomepreprotein translocase SecB subunit3e-1064.7
NC_003116:658879:660864660864661307444Neisseria meningitidis Z2491, complete genomeexport protein SecB3e-1064.7
NC_009483:1636189:164915016491501649581432Geobacter uraniireducens Rf4 chromosome, complete genomepreprotein translocase subunit SecB-like protein2e-0651.6