Pre_GI: BLASTP Hits

Some Help

Query: NC_005139:2201820:2273364 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 2273364, End: 2273798, Length: 435

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017270:1755552:178587117858711786299429Vibrio cholerae LMA3984-4 chromosome chromosome I, completehypothetical protein7e-56215
NC_002505:1931750:194880019488001949114315Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein8e-37152
NC_009457:1444449:150190315019031502217315Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein8e-37152
NC_012582:2013515:203332220333222033636315Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein8e-37152
NC_012668:1688500:169839316983931698707315Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein8e-37152
NC_016445:1363831:142020114202011420515315Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein8e-37152
NC_016944:514742:539104539104539541438Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein8e-35145
NC_012668:62500:807998079981242444Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein1e-34144
NC_002505:514732:539097539097539540444Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein1e-34144
NC_016602:173314:184209184209184646438Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehypothetical protein1e-33141
NC_005139:796546:811990811990812424435Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein2e-31134
NC_016944:1978058:199524619952461995422177Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein1e-24111
NC_016944:1978058:198290219829021983039138Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein1e-1478.2
NC_016445:1363831:140799514079951408132138Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein1e-1478.2
NC_012668:1688500:171077617107761710913138Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein1e-1478.2
NC_012582:2013515:202111620211162021253138Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein1e-1478.2
NC_012578:1838470:188372718837271883864138Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein1e-1478.2
NC_002505:1931750:193659419365941936731138Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein1e-1478.2
NC_009457:1444449:148970314897031489834132Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein2e-1374.3
NC_013456:212150:226063226063226488426Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein1e-0755.5