Pre_GI: BLASTP Hits

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Query: NC_005126:1265071:1301903 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 1301903, End: 1302790, Length: 888

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012962:1661683:167780716778071678544738Photorhabdus asymbiotica, complete genomehypothetical protein5e-64244
NC_005126:4333767:4356175435617543571821008Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-63241
NC_002973:72328:9323693236947591524Listeria monocytogenes str. 4b F2365, complete genomehypothetical protein1e-34147
NC_009708:1735903:1762407176240717701737767Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehemagglutinin/adhesin repeat-containing protein1e-29130
NC_009484:2442923:245595624559562456213258Acidiphilium cryptum JF-5 chromosome, complete genome2e-1376.3
NC_005126:1265071:131283113128311313517687Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-0963.9
NC_008149:2337336:2351976235197623595237548Yersinia pestis Nepal516, complete genomehemolysin3e-0962.8
NC_008150:2207198:2221838222183822293857548Yersinia pestis Antiqua, complete genomeputative hemolysin3e-0962.8
NC_014029:2729832:2742445274244527499957551Yersinia pestis Z176003 chromosome, complete genomeadhesin3e-0962.8
NC_017265:1571305:1597411159741116030595649Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative adhesin/hemolysin precursor3e-0962.8
NC_006155:2979500:2983155298315529908077653Yersinia pseudotuberculosis IP 32953, complete genomeputative hemolysin3e-0962.8
NC_009381:2138625:2142329214232921498767548Yersinia pestis Pestoides F chromosome, complete genomehemolysin3e-0962.8
NC_010634:2894631:2901085290108529086807596Yersinia pseudotuberculosis PB1/+, complete genomefilamentous haemagglutinin outer membrane protein3e-0962.8
NC_004088:1851500:1874239187423918819787740Yersinia pestis KIM, complete genomehemagglutinin-like secreted protein3e-0962.8
NC_003143:2778494:2790123279012327977307608Yersinia pestis CO92, complete genomeputative hemolysin3e-0962.8
NC_017154:2774955:2789595278959527971907596Yersinia pestis D106004 chromosome, complete genomeadhesin3e-0962.8
NC_017168:2941938:2964718296471829723137596Yersinia pestis A1122 chromosome, complete genomeputative hemolysin3e-0962.8
NC_010159:1794000:1804164180416418117567593Yersinia pestis Angola, complete genomehaemagglutination activity domain protein3e-0962.8
NC_005126:1613818:161819316181931618849657Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein8e-0961.2
NC_013508:876431:9017899017899093907602Edwardsiella tarda EIB202, complete genomehypothetical protein1e-0860.8
NC_005126:1613818:161623216162321616354123Photorhabdus luminescens subsp. laumondii TTO1, complete genome8e-0858.2
NC_016791:1980844:1993946199394619979804035Clostridium sp. BNL1100 chromosome, complete genomehypothetical protein1e-0757.4
NC_005126:4333767:434091043409104341191282Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-0756.2
NC_014306:1981956:2006198200619820083692172Erwinia billingiae Eb661, complete genomePutative hemolysin7e-0754.7
NC_012962:1661683:167880016788001679423624Photorhabdus asymbiotica, complete genomesimilar to haemagluttinin from E.coli-cdia4e-0652.4