Pre_GI: BLASTP Hits

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Query: NC_004632:28470:41772 Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000B,

Start: 41772, End: 42281, Length: 510

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009378:106193:113890113890114444555Yersinia pestis Pestoides F plasmid MT, complete sequenceendonuclease5e-45179
NC_007948:1972290:198970319897031990245543Polaromonas sp. JS666, complete genomePhospholipase D/Transphosphatidylase3e-41167
NC_010508:1705500:172440717244071725030624Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencephosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase like enzyme2e-39161
NC_008542:1727000:174593217459321746555624Burkholderia cenocepacia HI2424 chromosome 1, complete sequencephosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthases like enzyme2e-39161
NC_008060:1182378:120124712012471201975729Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencephosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthases like enzyme2e-39160
NC_016846:24500:397683976840247480Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,endonuclease3e-38157
NC_010981:242500:275469275469275975507Wolbachia pipientis, complete genomePutative endonuclease2e-2097.8
NC_008120:62000:813258132581813489Yersinia pestis Antiqua plasmid pMT, complete sequencehypothetical protein1e-1995.9
NC_010158:92819:994239942399911489Yersinia pestis Angola plasmid pMT-pPCP, complete sequencephospholipase D family protein1e-1995.9
NC_008118:56777:857718577186259489Yersinia pestis Nepal516 plasmid pMT, complete sequencehypothetical protein1e-1995.9
NC_003134:64672:738817388174369489Yersinia pestis CO92 plasmid pMT1, complete sequenceputative phospholipase D1e-1995.9
NC_004838:51013:576295762958117489Yersinia pestis KIM plasmid pMT-1, complete sequenceputative endonuclease1e-1995.9
NC_009378:106193:121863121863122351489Yersinia pestis Pestoides F plasmid MT, complete sequencehypothetical protein1e-1995.9
NC_012796:4075583:410442541044254104946522Desulfovibrio magneticus RS-1, complete genomeputative nuclease1e-1995.5
NC_007626:2204767:223328122332812233814534Magnetospirillum magneticum AMB-1, complete genomePhosphatidylserine/phosphatidylglycerophosphate/ cardioli pin synthase and related enzyme7e-1993.2
NC_012796:3600630:366475836647583665285528Desulfovibrio magneticus RS-1, complete genomeputative nuclease1e-1892.4
NC_011769:3434744:344402334440233444577555Desulfovibrio vulgaris str. 'Miyazaki F', complete genomephosphatidylserine/phosphatidylglycerophosphate related protein2e-1788.6
NC_010981:1371265:141388014138801414506627Wolbachia pipientis, complete genomePutative endonuclease2e-1685.1
NC_010793:496500:514551514551515081531Orientia tsutsugamushi str. Ikeda, complete genomehypothetical protein2e-1581.3
NC_011979:773673:778672778672779202531Geobacter sp. FRC-32, complete genomephosphatidylserine/phosphatidylglycerophosphate/ cardioli pin synthase and related enzyme3e-1581.3
NC_010981:468465:484125484125484667543Wolbachia pipientis, complete genomePutative endonuclease protein4e-1580.9
NC_014098:2225174:224281922428192243388570Bacillus tusciae DSM 2912 chromosome, complete genomePhosphatidylserine/phosphatidylglycerophosphate/ cardiolipinsynthase-like protein9e-1372.8
NC_011979:646518:655422655422655949528Geobacter sp. FRC-32, complete genomephosphatidylserine/phosphatidylglycerophosphate/ cardioli pin synthase and related enzyme3e-1270.9
NC_000963:1024000:102753810275381028155618Rickettsia prowazekii str. Madrid E, complete genomehypothetical protein1e-1065.9
NC_017048:225980:257960257960258577618Rickettsia prowazekii str. GvV257 chromosome, complete genomehypothetical protein1e-1065.9
NC_017049:1022000:102580710258071026424618Rickettsia prowazekii str. Chernikova chromosome, complete genomehypothetical protein1e-1065.9
NC_017050:1024000:102745710274571028074618Rickettsia prowazekii str. Katsinyian chromosome, complete genomehypothetical protein1e-1065.9
NC_017056:995500:102744810274481028065618Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomehypothetical protein1e-1065.9
NC_017057:1024000:102811410281141028731618Rickettsia prowazekii str. RpGvF24 chromosome, complete genomehypothetical protein1e-1065.9
NC_004631:3030580:303809730380973038348252Salmonella enterica subsp. enterica serovar Typhi Ty2, completeendonuclease fragment2e-0754.7
NC_003198:3042000:305219030521903052441252Salmonella enterica subsp. enterica serovar Typhi str. CT18,endonuclease fragment2e-0754.7
NC_017295:1507956:150859715085971509178582Clostridium acetobutylicum EA 2018 chromosome, complete genomeendonuclease2e-0652
NC_015687:1508664:151078415107841511365582Clostridium acetobutylicum DSM 1731 chromosome, complete genomephospholipase D family endonuclease2e-0652
NC_014828:2657623:266748426674842668077594Ethanoligenens harbinense YUAN-3 chromosome, complete genomephosphatidylserine/phosphatidylglycerophosphate/ cardiolipinsynthase- like protein4e-0650.8