Pre_GI: BLASTP Hits

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Query: NC_004347:4541742:4557054 Shewanella oneidensis MR-1, complete genome

Start: 4557054, End: 4557683, Length: 630

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016901:2594942:260227826022782602943666Shewanella baltica OS678 chromosome, complete genomeTorD-like chaperone5e-35147
NC_009997:2635025:264236126423612643026666Shewanella baltica OS195, complete genomecytoplasmic chaperone TorD family protein5e-35147
NC_009831:1539159:155485015548501555464615Shewanella sediminis HAW-EB3, complete genomecytoplasmic chaperone TorD family protein7e-1373.9
NC_012962:1827000:182919018291901829786597Photorhabdus asymbiotica, complete genometwin-arginine leader-binding protein dmsd2e-1169.3
NC_015061:1598920:159984715998471600455609Rahnella sp. Y9602 chromosome, complete genomecytoplasmic chaperone TorD family protein2e-1169.3
NC_017047:1551836:155276315527631553371609Rahnella aquatilis HX2 chromosome, complete genomecytoplasmic chaperone TorD family protein2e-1169.3
NC_016818:1605918:160684516068451607453609Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative component of anaerobic dehydrogenase2e-1065.9
NC_016513:810259:811531811531812145615Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completetwin-arginine leader-binding protein DmsD4e-1064.7
NC_003197:4551880:455573145557314556384654Salmonella typhimurium LT2, complete genomeputative anaerobic dehydrogenase component7e-0960.8
NC_016810:4573172:457702345770234577676654Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein7e-0960.8
NC_016856:4563435:456927345692734569926654Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative anaerobic dehydrogenase component7e-0960.8
NC_016857:4573173:457702445770244577677654Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative anaerobic dehydrogenase component7e-0960.8
NC_016863:4513106:451687945168794517532654Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative anaerobic dehydrogenase component7e-0960.8
NC_017046:4571833:457574445757444576337594Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein7e-0960.5
NC_016860:4649274:465318546531854653778594Salmonella enterica subsp. enterica serovar Typhimurium strputative anaerobic dehydrogenase component7e-0960.5
NC_010102:4477836:448174744817474482340594Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-0960.5
NC_006905:4486433:449028444902844490937654Salmonella enterica subsp. enterica serovar Choleraesuis strputative component of anaerobic dehydrogenase8e-0960.5
NC_012125:4481808:448571944857194486312594Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein8e-0960.5
NC_011149:4474012:447792344779234478516594Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-0860.1
NC_011274:4385039:439089543908954391548654Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-0860.1
NC_011205:4564645:457054345705434571136594Salmonella enterica subsp. enterica serovar Dublin str. CT_020218531e-0860.1
NC_011294:4409137:441298744129874413640654Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-0860.1
NC_016831:4367000:437110143711014371694594Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-0859.7
NC_007907:4714844:471818247181824718781600Desulfitobacterium hafniense Y51, complete genomeuncharacterized component of anaerobic dehydrogenase1e-0859.7
NC_011083:4547825:455173645517364552329594Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,1e-0859.7
NC_011080:4543000:454691045469104547503594Salmonella enterica subsp. enterica serovar Newport str. SL254,oxidoreductase component2e-0859.3
NC_011830:1288984:131965413196541320241588Desulfitobacterium hafniense DCB-2, complete genomecytoplasmic chaperone TorD family protein2e-0858.9
NC_011147:4297513:430330043033004304004705Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-0858.9
NC_016832:4368948:437277943727794373372594Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Oxidoreductase component3e-0858.5
NC_010505:3376322:337925233792523379854603Methylobacterium radiotolerans JCM 2831, complete genomecytoplasmic chaperone TorD family protein3e-0858.5
NC_003198:4397074:440081244008124401498687Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein3e-0858.5
NC_004631:4381724:438546243854624386148687Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein3e-0858.5
NC_011094:4442478:444632944463294446982654Salmonella enterica subsp. enterica serovar Schwarzengrund stroxidoreductase5e-0857.8
NC_007907:5185510:523272952327295233316588Desulfitobacterium hafniense Y51, complete genomeuncharacterized component of anaerobic dehydrogenase6e-0857.4
NC_008258:1076922:109390110939011094455555Shigella flexneri 5 str. 8401, complete genomeputative oxidoreductase component2e-0756.2
NC_009715:1923676:193370719337071934357651Campylobacter curvus 525.92 chromosome, complete genomecytoplasmic chaperone2e-0756.2
NC_015738:1114919:112823411282341128893660Eggerthella sp. YY7918, complete genomehypothetical protein2e-0755.5
NC_004337:1065609:107452110745211075075555Shigella flexneri 2a str. 301, complete genomeputative oxidoreductase component4e-0755.1
NC_005126:3485330:350146835014683501872405Photorhabdus luminescens subsp. laumondii TTO1, complete genome6e-0753.9
NC_021182:4310900:431569543156954316384690Clostridium pasteurianum BC1, complete genomeputative component of anaerobic dehydrogenase1e-0653.1
NC_010939:1920781:192932819293281929933606Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein2e-0652.4
NC_009802:1827138:183000318300031830647645Campylobacter concisus 13826, complete genomeubiquinol Cytochrome c oxidoreductase, Rieske 2Fe-2S subunit4e-0651.6
NC_009053:1895485:190402719040271904632606Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein1e-0550.1