Pre_GI: BLASTP Hits

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Query: NC_003143:2741478:2743680 Yersinia pestis CO92, complete genome

Start: 2743680, End: 2744234, Length: 555

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a recent Orientalis subtype isolated in the USA from a patient who died of pneumonic plague after acquiring the disease from an infected cat. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:2999514:301819930181993018753555Yersinia pestis A1122 chromosome, complete genomeputative yfeABCD locus regulator4e-103373
NC_009381:775357:799323799323799877555Yersinia pestis Pestoides F chromosome, complete genomeyfeABCD locus regulator4e-103373
NC_003198:1693623:170899517089951709531537Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-69261
NC_011083:1408202:140820214082021408738537Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-69261
NC_010102:1703172:171854117185411719077537Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-69261
NC_003197:1401603:140315714031571403693537Salmonella typhimurium LT2, complete genomeputative regulatory protein2e-69261
NC_004631:1271500:127159912715991272135537Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-69261
NC_011205:1938574:195393219539321954468537Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-69261
NC_016810:1358456:136001013600101360546537Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-69261
NC_016832:1269018:127057212705721271108537Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-69261
NC_016856:1411579:141313314131331413669537Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative regulatory protein2e-69261
NC_016857:1358456:136001013600101360546537Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein2e-69261
NC_016860:1399290:140084414008441401380537Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-69261
NC_016863:1359769:136132313613231361859537Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative regulatory protein2e-69261
NC_011274:1850086:186545418654541865990537Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein5e-69259
NC_011294:1810285:182564318256431826179537Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein5e-69259
NC_016831:1166868:116842211684221168958537Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-68257
NC_011147:1573470:159032815903281590864537Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein7e-68256
NC_006511:1579776:159514715951471595683537Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein7e-68256
NC_020063:2565605:259632625963262596862537Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein1e-66252
NC_012880:2399205:240889324088932409441549Dickeya dadantii Ech703, complete genomehypothetical protein4e-66250
NC_017046:1358531:136019013601901360621432Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein5e-52203